Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen06g012200 Solanum pennellii HOM05D002932 ORTHO05D003208 5.2e-69 264.2 131 100.0
PGSC0003DMG400028894 Solanum tuberosum HOM05D002932 ORTHO05D003208 4.9e-51 204.5 141 75.9
Solyc06g036460.4 Solanum lycopersicum HOM05D002932 ORTHO05D003208 7.8e-49 197.2 128 84.4
CAN.G204.10 Capsicum annuum HOM05D002932 ORTHO05D003208 1.1e-31 140.2 170 51.2
Peaxi162Scf00618g00627 Petunia axillaris HOM05D002932 ORTHO05D003208 7.1e-18 94.4 183 39.9
Nitab4.5_0009102g0020 Nicotiana tabacum HOM05D002932 ORTHO05D003208 1.8e-16 89.7 173 38.7
CAN.G926.8 Capsicum annuum HOM05D002932 ORTHO05D003208 8.7e-16 87.4 191 35.6
Sed0015119 Sechium edule HOM05D002932 ORTHO05D003208 3.1e-13 79.0 190 32.6
ClCG05G008540 Citrullus lanatus HOM05D002932 ORTHO05D003208 1.2e-12 77.0 190 32.6
MELO3C006960.2 Cucumis melo HOM05D002932 ORTHO05D003208 1.2e-12 77.0 187 33.2
Ciclev10005884m.g Citrus clementina HOM05D002932 ORTHO05D003208 3.4e-12 75.5 185 32.4
Sed0008251 Sechium edule HOM05D002932 ORTHO05D003208 3.4e-12 75.5 191 31.9
CsaV3_3G021720 Cucumis sativus L. HOM05D002932 ORTHO05D003208 4.5e-12 75.1 187 32.6
Actinidia03151 Actinidia chinensis HOM05D002932 ORTHO05D003208 7.6e-12 74.3 179 34.1
Duzib084G0326 Durio zibethinus HOM05D002932 ORTHO05D003208 1.0e-11 73.9 189 32.3
Potri.015G026600 Populus trichocarpa HOM05D002932 ORTHO05D003208 1.7e-11 73.2 186 32.8
Solyc03g007775.2 Solanum lycopersicum HOM05D002932 ORTHO05D003208 2.2e-11 72.8 189 33.3
Sabra12G0024300 Salix brachista HOM05D002932 ORTHO05D003208 5.0e-11 71.6 191 33.0
FAN03G0587 Fragaria x ananassa HOM05D002932 ORTHO05D003208 6.5e-11 71.2 199 28.1
Dinv35290 Davidia involucrata HOM05D002932 ORTHO05D003208 8.4e-11 70.9 186 32.8
FvH4_7g30650 Fragaria vesca HOM05D002932 ORTHO05D003208 8.4e-11 70.9 199 28.1
FAN06G0995 Fragaria x ananassa HOM05D002932 ORTHO05D003208 8.4e-11 70.9 199 28.1
Phvul.004G102700 Phaseolus vulgaris HOM05D002932 ORTHO05D003208 8.4e-11 70.9 187 32.6
RcHm_v2.0_Chr1g0379591 Rosa chinensis HOM05D002932 ORTHO05D003208 8.4e-11 70.9 197 28.9
FAN10G0880 Fragaria x ananassa HOM05D002932 ORTHO05D003208 1.4e-10 70.1 199 27.6
FAN10G1573 Fragaria x ananassa HOM05D002932 ORTHO05D003208 1.4e-10 70.1 199 27.6
Glyma.09G126400 Glycine max HOM05D002932 ORTHO05D003208 1.4e-10 70.1 189 32.3
Sabra15G0022400 Salix brachista HOM05D002932 ORTHO05D003208 1.4e-10 70.1 89 44.9
Thecc.03G188500 Theobroma cacao HOM05D002932 ORTHO05D003208 1.4e-10 70.1 184 31.0
Actinidia31853 Actinidia chinensis HOM05D002932 ORTHO05D003208 1.9e-10 69.7 126 37.3
Cfa016327 Carpinus fangiana HOM05D002932 ORTHO05D003208 1.9e-10 69.7 130 34.6
Haze_00079 Corylus avellana HOM05D002932 ORTHO05D003208 1.9e-10 69.7 130 34.6
Psat0s694g0080 Pisum sativum HOM05D002932 ORTHO05D003208 1.9e-10 69.7 189 30.7
Peaxi162Scf00904g00468 Petunia axillaris HOM05D002932 ORTHO05D003208 2.5e-10 69.3 159 37.1
QL09p012032 Quercus lobata HOM05D002932 ORTHO05D003208 2.5e-10 69.3 96 39.6
Sabra15G0019600 Salix brachista HOM05D002932 ORTHO05D003208 4.2e-10 68.6 89 43.8
TPR.G7742 Trifolium pratense HOM05D002932 ORTHO05D003208 4.2e-10 68.6 188 28.7
VMungo0464G0277 Vigna mungo HOM05D002932 ORTHO05D003208 4.2e-10 68.6 187 32.1
Lalb_Chr01g0009541 Lupinus albus HOM05D002932 ORTHO05D003208 5.5e-10 68.2 189 31.7
Medtr6g034050 Medicago truncatula HOM05D002932 ORTHO05D003208 5.5e-10 68.2 171 33.3
TWI14G1190 Tripterygium wilfordii HOM05D002932 ORTHO05D003208 7.2e-10 67.8 186 30.6
Dinv28362 Davidia involucrata HOM05D002932 ORTHO05D003208 9.3e-10 67.4 186 33.9
Oeu037130.1 Olea europaea HOM05D002932 ORTHO05D003208 9.3e-10 67.4 190 30.0
Potri.012G035200 Populus trichocarpa HOM05D002932 ORTHO05D003208 1.6e-09 66.6 187 31.0
COL.COLO4_30256 Corchorus olitorius HOM05D002932 ORTHO05D003208 2.1e-09 66.2 183 33.9
Lj2g0001659 Lotus japonicus HOM05D002932 ORTHO05D003208 2.1e-09 66.2 194 30.9
Lalb_Chr02g0141341 Lupinus albus HOM05D002932 ORTHO05D003208 2.1e-09 66.2 185 30.8
Oeu009283.1 Olea europaea HOM05D002932 ORTHO05D003208 2.1e-09 66.2 187 31.0
Phvul.007G077100 Phaseolus vulgaris HOM05D002932 ORTHO05D003208 2.1e-09 66.2 188 30.9
TWI23G0695 Tripterygium wilfordii HOM05D002932 ORTHO05D003208 2.1e-09 66.2 186 30.6
Hma1.2p1_0142F.1_g064300 Hydrangea macrophylla HOM05D002932 ORTHO05D003208 2.7e-09 65.9 188 31.4
Manes.06G154700 Manihot esculenta HOM05D002932 ORTHO05D003208 2.7e-09 65.9 186 30.6
GSVIVG01028788001 Vitis vinifera HOM05D003816 ORTHO05D004410 2.7e-09 65.9 184 33.2
MSTRG.27064 Avicennia marina HOM05D002932 ORTHO05D003208 3.5e-09 65.5 68 51.5
Migut.F00261 Erythranthe guttata HOM05D002932 ORTHO05D003208 3.5e-09 65.5 194 28.9
SalBow4G2867 Salvia bowleyana HOM05D002932 ORTHO05D003208 3.5e-09 65.5 50 60.0
PGSC0003DMG400019964 Solanum tuberosum HOM05D002932 ORTHO05D003208 3.5e-09 65.5 188 31.9
arahy.Tifrunner.gnm1.ann1.M5AIDB Arachis hypogaea HOM05D002932 ORTHO05D003208 4.6e-09 65.1 141 36.2
Glyma.20G164000 Glycine max HOM05D002932 ORTHO05D003208 4.6e-09 65.1 186 30.6
Duzib068G0647 Durio zibethinus HOM05D002932 ORTHO05D003208 6.1e-09 64.7 183 31.7
AUR62031454 Chenopodium quinoa HOM05D002932 ORTHO05D003208 7.9e-09 64.3 159 30.2
Glyma.16G173400 Glycine max HOM05D002932 ORTHO05D003208 7.9e-09 64.3 189 30.7
Ah.07g206300 Amaranthus hybridus HOM05D002932 ORTHO05D003208 1.0e-08 63.9 183 28.4
arahy.Tifrunner.gnm1.ann1.N7QM32 Arachis hypogaea HOM05D002932 ORTHO05D003208 1.3e-08 63.5 138 34.1
THA.LOC104825123 Tarenaya hassleriana HOM05D002932 ORTHO05D003208 1.3e-08 63.5 188 28.7
Cpa.g.sc3.12 Carica papaya HOM05D002932 ORTHO05D003208 1.8e-08 63.2 184 28.8
Gohir.A12G254433 Gossypium hirsutum HOM05D002932 ORTHO05D003208 1.8e-08 63.2 182 31.3
Lj5g0016966 Lotus japonicus HOM05D002932 ORTHO05D003208 1.8e-08 63.2 184 32.1
VMungo0720G0620 Vigna mungo HOM05D002932 ORTHO05D003208 1.8e-08 63.2 185 30.8
CSS0021611 Camellia sinensis var. sinensis HOM05D002932 ORTHO05D003208 3.0e-08 62.4 118 36.4
Manes.14G020200 Manihot esculenta HOM05D002932 ORTHO05D003208 3.0e-08 62.4 188 31.4
Sed0018025 Sechium edule HOM05D002932 ORTHO05D003208 3.0e-08 62.4 170 31.8
AUR62021078 Chenopodium quinoa HOM05D002932 ORTHO05D003208 3.9e-08 62.0 159 29.6
Duzib205G0983 Durio zibethinus HOM05D002932 ORTHO05D003208 5.1e-08 61.6 100 39.0
Lalb_Chr21g0305311 Lupinus albus HOM05D002932 ORTHO05D003208 5.1e-08 61.6 188 31.9
THA.LOC104811937 Tarenaya hassleriana HOM05D002932 ORTHO05D003208 5.1e-08 61.6 67 49.3
Actinidia08604 Actinidia chinensis HOM05D002932 ORTHO05D003208 6.7e-08 61.2 187 31.6
Prupe.2G304400 Prunus persica HOM05D002932 ORTHO05D003208 6.7e-08 61.2 41 68.3
Glyma.10G229200 Glycine max HOM05D002932 ORTHO05D003208 8.7e-08 60.8 187 28.3
Lalb_Chr03g0035141 Lupinus albus HOM05D002932 ORTHO05D003208 8.7e-08 60.8 186 30.6
Medtr1g099440 Medicago truncatula HOM05D002932 ORTHO05D003208 8.7e-08 60.8 185 30.3
Sopen03g003700 Solanum pennellii HOM05D002932 ORTHO05D003208 8.7e-08 60.8 190 30.0
TPR.G36623 Trifolium pratense HOM05D002932 ORTHO05D003208 1.1e-07 60.5 186 31.7
Medtr6g034060 Medicago truncatula HOM05D002932 ORTHO05D003208 1.5e-07 60.1 201 29.9
Sc19g0001040 Simmondsia chinensis HOM05D002932 ORTHO05D003208 1.9e-07 59.7 165 32.1
HanXRQChr13g0392281 Helianthus annuus HOM05D002932 ORTHO05D003208 2.5e-07 59.3 44 63.6
EL10Ac3g05377 Beta vulgaris HOM05D002932 ORTHO05D003208 3.3e-07 58.9 178 30.9
Carub.0008s1309 Capsella rubella HOM05D002932 ORTHO05D003208 3.3e-07 58.9 189 28.0
Gohir.D12G255000 Gossypium hirsutum HOM05D002932 ORTHO05D003208 3.3e-07 58.9 82 42.7
Gorai.008G272600 Gossypium raimondii HOM05D002932 ORTHO05D003208 3.3e-07 58.9 82 42.7
MD07G1282200 Malus domestica HOM05D002932 ORTHO05D003208 4.3e-07 58.5 41 65.9
CiPaw.06G005800 Carya illinoinensis HOM05D002932 ORTHO05D003208 5.7e-07 58.2 79 44.3
Atru.ctg97_1.61 Acer truncatum HOM05D002932 ORTHO05D003208 1.3e-06 57.0 183 27.3
Thhalv10014576m.g Eutrema salsugineum HOM05D002932 ORTHO05D003208 1.3e-06 57.0 191 28.8
Eucgr.A02685 Eucalyptus grandis HOM05D002932 ORTHO05D003208 2.2e-06 56.2 39 66.7
ECA238G1001 Erigeron canadensis HOM05D002932 ORTHO05D003208 2.8e-06 55.8 172 30.8
Lsat_1_v5_gn_2_133581 Lactuca sativa HOM05D002932 ORTHO05D003208 2.8e-06 55.8 176 32.4
MD01G1211600 Malus domestica HOM05D002932 ORTHO05D003208 2.8e-06 55.8 35 68.6
Ah.13g069610 Amaranthus hybridus HOM05D002932 ORTHO05D003208 3.7e-06 55.5 183 26.8
BcaC01g06213 Brassica carinata HOM05D002932 ORTHO05D003208 4.8e-06 55.1 193 27.5
A10p10380 Brassica napus HOM05D002932 ORTHO05D003208 4.8e-06 55.1 190 28.9
C03p18060 Brassica napus HOM05D002932 ORTHO05D003208 4.8e-06 55.1 193 27.5
BolC3t14211H Brassica oleracea HOM05D002932 ORTHO05D003208 4.8e-06 55.1 193 27.5
BraA10t43121Z Brassica rapa HOM05D002932 ORTHO05D003208 4.8e-06 55.1 190 28.9
vmacro06597 Vaccinium macrocarpon HOM05D002932 ORTHO05D003208 4.8e-06 55.1 181 27.6
Atru.chr1.321 Acer truncatum HOM05D002932 ORTHO05D003208 6.3e-06 54.7 35 62.9
ClCG01G000790 Citrullus lanatus HOM05D002932 ORTHO05D003208 6.3e-06 54.7 175 29.1
Sp6g15070 Schrenkiella parvula HOM05D002932 ORTHO05D003208 6.3e-06 54.7 86 40.7
FAN01G1179 Fragaria x ananassa HOM05D002932 ORTHO05D003208 8.2e-06 54.3 191 25.7
FAN06G4297 Fragaria x ananassa HOM05D002932 ORTHO05D003208 8.2e-06 54.3 191 25.7
Rhsim09G0202600 Rhododendron simsii HOM05D002932 ORTHO05D003208 8.2e-06 54.3 32 75.0


User provided reference genes

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