Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen06g011990 Solanum pennellii HOM05D006494 ORTHO05D007787 2.6e-126 455.3 214 100.0
PGSC0003DMG400029922 Solanum tuberosum HOM05D006494 ORTHO05D007787 3.5e-54 215.7 138 80.4
Sopen03g004010 Solanum pennellii HOM05D006494 ORTHO05D007787 1.4e-23 114.0 155 47.1
PGSC0003DMG400010122 Solanum tuberosum HOM05D006494 ORTHO05D007787 2.3e-21 106.7 155 45.2
Solyc06g011666.1 Solanum lycopersicum HOM05D006494 ORTHO05D007787 3.1e-18 96.3 93 52.7
Peaxi162Scf00618g00753 Petunia axillaris HOM05D006494 ORTHO05D007787 1.3e-16 90.9 144 43.1
Nitab4.5_0000084g0320 Nicotiana tabacum HOM05D006494 ORTHO05D007787 5.4e-15 85.5 153 41.8
Nitab4.5_0000572g0070 Nicotiana tabacum HOM05D006494 ORTHO05D007787 9.2e-15 84.7 129 44.2
Solyc03g025160.4 Solanum lycopersicum HOM05D006494 ORTHO05D007787 1.1e-12 77.8 105 50.5
Peaxi162Scf00444g00014 Petunia axillaris HOM05D006494 ORTHO05D007787 1.5e-12 77.4 114 44.7
Rhsim09G0200100 Rhododendron simsii HOM05D006494 ORTHO05D007787 2.5e-12 76.6 167 35.9
Rhsim09G0199800 Rhododendron simsii HOM05D006494 ORTHO05D007787 8.1e-11 71.6 182 33.5
Dinv28397 Davidia involucrata HOM05D006494 ORTHO05D007787 1.4e-10 70.9 165 34.5
vmacro06639 Vaccinium macrocarpon HOM05D006494 ORTHO05D007787 1.8e-10 70.5 172 37.2
Actinidia34147 Actinidia chinensis HOM05D006494 ORTHO05D007787 3.1e-10 69.7 151 33.8
Solyc06g036180.3 Solanum lycopersicum HOM05D006494 ORTHO05D007787 3.1e-10 69.7 46 78.3
PGR142G1234 Punica granatum HOM05D006494 ORTHO05D007787 4.0e-10 69.3 141 33.3
Hma1.2p1_0327F.1_g126290 Hydrangea macrophylla HOM05D006494 ORTHO05D007787 2.6e-09 66.6 165 37.0
MSTRG.8473 Avicennia marina HOM05D006494 ORTHO05D007787 1.3e-08 64.3 156 35.3
Oeu022606.1 Olea europaea HOM05D006494 ORTHO05D007787 2.9e-08 63.2 138 32.6
vmacro09820 Vaccinium macrocarpon HOM05D006494 ORTHO05D007787 3.8e-08 62.8 160 34.4
Migut.F01093 Erythranthe guttata HOM05D006494 ORTHO05D007787 6.4e-08 62.0 157 34.4
Cfa016278 Carpinus fangiana HOM05D006494 ORTHO05D007787 1.1e-07 61.2 158 31.6
SGA_v2.0_scaffold10G05304 Striga asiatica HOM05D006494 ORTHO05D007787 1.4e-07 60.8 147 32.7
Ciclev10005709m.g Citrus clementina HOM05D006494 ORTHO05D007787 4.2e-07 59.3 153 33.3
Oeu006795.1 Olea europaea HOM05D006494 ORTHO05D007787 4.2e-07 59.3 120 37.5
Migut.F00309 Erythranthe guttata HOM05D006494 ORTHO05D007787 5.4e-07 58.9 126 34.9
CSS0049923 Camellia sinensis var. sinensis HOM05D006494 ORTHO05D007787 9.3e-07 58.2 160 32.5
Haze_00032 Corylus avellana HOM05D006494 ORTHO05D007787 1.6e-06 57.4 159 31.4
Manes.06G151500 Manihot esculenta HOM05D006494 ORTHO05D007787 1.6e-06 57.4 149 28.9
QL09p013118 Quercus lobata HOM05D006494 ORTHO05D007787 2.1e-06 57.0 120 39.2
Cc02_g02520 Coffea canephora HOM05D006494 ORTHO05D007787 2.7e-06 56.6 149 31.5
Actinidia20864 Actinidia chinensis HOM05D006494 ORTHO05D007787 3.5e-06 56.2 157 29.9
CsaV3_3G017370 Cucumis sativus L. HOM05D006494 ORTHO05D007787 7.8e-06 55.1 146 32.2


User provided reference genes

Program Settings