Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen06g007660 Solanum pennellii HOM05D008609 ORTHO05D014791 2.2e-290 1001.5 491 100.0
Sopen11g018250 Solanum pennellii HOM05D015862 ORTHO05D010659 4.5e-41 173.3 108 82.4
CAN.G1126.4 Capsicum annuum HOM05D008609 ORTHO05D010987 3.7e-27 127.1 58 98.3
CAN.G1572.11 Capsicum annuum HOM05D003467 ORTHO05D004220 3.7e-27 127.1 100 63.0
CAN.G2141.7 Capsicum annuum HOM05D003467 ORTHO05D004220 3.7e-27 127.1 100 63.0
CAN.G76.4 Capsicum annuum HOM05D003467 ORTHO05D004220 3.7e-27 127.1 100 63.0
DCAR_032451 Daucus carota HOM05D008609 ORTHO05D010987 3.7e-27 127.1 58 98.3
Solyc00g022100.1 Solanum lycopersicum HOM05D008609 ORTHO05D010987 3.7e-27 127.1 58 98.3
Oeu030837.1 Olea europaea HOM05D008609 ORTHO05D010987 1.8e-26 124.8 58 96.6
HanXRQMTg0579261 Helianthus annuus HOM05D008609 ORTHO05D010987 3.2e-26 124.0 58 96.6
Lsat_1_v5_gn_7_96580 Lactuca sativa HOM05D008609 ORTHO05D010987 3.2e-26 124.0 58 96.6
Lsat_1_v5_gn_8_162321 Lactuca sativa HOM05D008609 ORTHO05D010987 3.2e-26 124.0 58 96.6
unitig_87.g27990 Utricularia gibba HOM05D008609 ORTHO05D010987 1.6e-25 121.7 58 94.8
CAN.G1321.11 Capsicum annuum HOM05D008609 ORTHO05D010987 2.0e-25 121.3 58 94.8
Nn1g09950 Nelumbo nucifera HOM05D008609 ORTHO05D010987 2.0e-25 121.3 58 94.8
Nn1g09951 Nelumbo nucifera HOM05D008609 ORTHO05D010987 2.0e-25 121.3 58 94.8
Nn1g10162 Nelumbo nucifera HOM05D008609 ORTHO05D010987 2.0e-25 121.3 58 94.8
Sopen05g012580 Solanum pennellii HOM05D008609 ORTHO05D010987 2.0e-25 121.3 57 96.5
CAN.G134.21 Capsicum annuum HOM05D008609 ORTHO05D010987 4.6e-25 120.2 73 79.5
SalBow1G7666 Salvia bowleyana HOM05D008609 ORTHO05D010987 5.9e-25 119.8 58 93.1
Aqoxy12s013 Aquilegia oxysepala HOM05D008609 ORTHO05D010987 1.3e-24 118.6 57 94.7
Sabra06G0186100 Salix brachista HOM05D008609 ORTHO05D010987 1.3e-24 118.6 58 93.1
CAN.G267.15 Capsicum annuum HOM05D003467 ORTHO05D004220 1.1e-23 115.5 114 52.6
RcHm_v2.0_MTg0499041 Rosa chinensis HOM05D008609 ORTHO05D010987 1.5e-23 115.2 59 88.1
CANSAT16G0007 Cannabis sativa HOM05D008609 ORTHO05D010987 9.5e-23 112.5 58 89.7
CDE02G2752 Ceratophyllum demersum HOM05D008609 ORTHO05D010987 5.2e-21 106.7 57 86.0
Nitab4.5_0020169g0010 Nicotiana tabacum HOM05D012309 ORTHO05D014791 1.5e-20 105.1 54 92.6
Sopen05g012590 Solanum pennellii HOM05D003467 ORTHO05D004220 7.5e-20 102.8 54 88.9
CAN.G1126.3 Capsicum annuum HOM05D012309 ORTHO05D014791 1.3e-19 102.1 54 88.9
CAN.G1321.12 Capsicum annuum HOM05D012309 ORTHO05D014791 2.9e-19 100.9 54 87.0
CsaV3_UNG201590 Cucumis sativus L. HOM05D008609 ORTHO05D010987 3.7e-19 100.5 60 80.0
CAN.G72.15 Capsicum annuum HOM05D012309 ORTHO05D014791 6.4e-19 99.8 54 87.0
Nitab4.5_0000866g0150 Nicotiana tabacum HOM05D003467 ORTHO05D010659 1.1e-18 99.0 78 66.7
Cc00_g01740 Coffea canephora HOM05D009000 ORTHO05D010659 3.2e-18 97.4 102 53.9
CAN.G502.13 Capsicum annuum HOM05D012309 ORTHO05D014791 4.1e-18 97.1 54 85.2
Gorai.001G163900 Gossypium raimondii HOM05D008609 ORTHO05D010987 1.3e-16 92.0 58 77.6
TAR381G1488 Trochodendron aralioides HOM05D012309 ORTHO05D014791 2.3e-16 91.3 54 83.3
Nitab4.5_0001796g0090 Nicotiana tabacum HOM05D003467 ORTHO05D004220 1.5e-15 88.6 93 52.7
CAN.G72.9 Capsicum annuum HOM05D012309 ORTHO05D014791 5.6e-15 86.7 54 77.8
Aqoxy1G02973 Aquilegia oxysepala HOM05D008609 ORTHO05D010987 7.3e-15 86.3 49 83.7
Dinv06674 Davidia involucrata HOM05D003467 ORTHO05D004220 2.1e-14 84.7 54 79.6
CAN.G108.65 Capsicum annuum HOM05D012309 ORTHO05D014791 3.6e-14 84.0 83 53.0
FAN01G0730 Fragaria x ananassa HOM05D008609 ORTHO05D010987 1.1e-13 82.4 56 71.4
FAN10G3325 Fragaria x ananassa HOM05D008609 ORTHO05D010987 1.1e-13 82.4 56 71.4
FvH4_7g21890 Fragaria vesca HOM05D008609 ORTHO05D010987 2.3e-13 81.3 56 69.6
FAN06G0570 Fragaria x ananassa HOM05D008609 ORTHO05D010987 2.3e-13 81.3 56 69.6
FAN06G4761 Fragaria x ananassa HOM05D008609 ORTHO05D010987 2.3e-13 81.3 56 69.6
FAN11G1481 Fragaria x ananassa HOM05D008609 ORTHO05D010987 2.3e-13 81.3 56 69.6
FAN14G4692 Fragaria x ananassa HOM05D008609 ORTHO05D010987 2.3e-13 81.3 56 69.6
FAN03G1072 Fragaria x ananassa HOM05D008609 ORTHO05D010987 5.2e-13 80.1 56 67.9
Nitab4.5_0001152g0450 Nicotiana tabacum HOM05D008609 ORTHO05D010987 3.7e-11 73.9 64 62.5
CsaV3_UNG208180 Cucumis sativus L. HOM05D012309 ORTHO05D020467 3.2e-10 70.9 106 42.5
Lj2C1229G13 Lonicera japonica HOM05D012309 ORTHO05D014791 3.2e-10 70.9 68 58.8
Nitab4.5_0009709g0060 Nicotiana tabacum HOM05D003467 ORTHO05D004220 3.2e-10 70.9 40 80.0
Dinv06675 Davidia involucrata HOM05D000540 ORTHO05D000681 5.4e-10 70.1 100 46.0
Sc08g0004800 Simmondsia chinensis HOM05D004291 ORTHO05D005620 1.2e-09 68.9 84 47.6
Nitab4.5_0001176g0040 Nicotiana tabacum HOM05D008609 ORTHO05D010987 2.7e-09 67.8 32 90.6
Nitab4.5_0001152g0380 Nicotiana tabacum HOM05D012309 ORTHO05D011202 6.0e-09 66.6 40 82.5
Sed0025530 Sechium edule HOM05D003467 ORTHO05D004220 6.0e-09 66.6 44 70.5
ATR0661G063 Amborella trichopoda HOM05D012309 ORTHO05D014791 1.0e-08 65.9 50 66.0
Nitab4.5_0009709g0080 Nicotiana tabacum HOM05D008609 ORTHO05D010987 1.7e-08 65.1 83 45.8
Dinv06739 Davidia involucrata HOM05D008193 ORTHO05D010324 3.9e-08 63.9 122 36.1
Gorai.001G166300 Gossypium raimondii HOM05D003666 ORTHO05D004770 1.9e-07 61.6 78 42.3
CsaV3_UNG210260 Cucumis sativus L. HOM05D008609 ORTHO05D010987 1.2e-06 58.9 36 77.8
CAN.G1217.18 Capsicum annuum HOM05D000486 ORTHO05D000375 2.8e-06 57.8 103 39.8
Rhsim02G0011900 Rhododendron simsii HOM05D006881 ORTHO05D008423 4.7e-06 57.0 35 80.0
RhsimMtG0001000 Rhododendron simsii HOM05D000743 ORTHO05D000580 6.2e-06 56.6 112 38.4


User provided reference genes

Program Settings