Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen06g006900 Solanum pennellii HOM05D003911 ORTHO05D002175 1.6e-71 272.7 147 100.0
Solyc10g038140.1 Solanum lycopersicum HOM05D003911 ORTHO05D002175 2.3e-25 119.4 113 65.5
Solyc07g032130.1 Solanum lycopersicum HOM05D003911 ORTHO05D002175 7.5e-24 114.4 76 82.9
CAN.G47.7 Capsicum annuum HOM05D003911 ORTHO05D002175 2.8e-23 112.5 104 59.6
CAN.G126.50 Capsicum annuum HOM05D003911 ORTHO05D002175 8.3e-23 110.9 103 58.3
CAN.G383.4 Capsicum annuum HOM05D003911 ORTHO05D002175 2.4e-22 109.4 129 51.2
Nitab4.5_0007170g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.0e-22 107.8 97 62.9
Nitab4.5_0001361g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.0e-20 104.0 103 57.3
Nitab4.5_0000101g0410 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.6e-20 100.9 143 45.5
Solyc01g058120.1 Solanum lycopersicum HOM05D003911 ORTHO05D002175 8.6e-20 100.9 81 70.4
Nitab4.5_0000050g0250 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.1e-19 100.5 126 48.4
Nitab4.5_0000378g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.1e-19 100.5 103 57.3
Nitab4.5_0001204g0140 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.3e-19 99.0 113 53.1
Nitab4.5_0000663g0090 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.2e-19 97.8 126 46.8
CAN.G1622.3 Capsicum annuum HOM05D003911 ORTHO05D002175 1.6e-18 96.7 103 54.4
CAN.G146.8 Capsicum annuum HOM05D003911 ORTHO05D002175 4.7e-18 95.1 104 53.8
Nitab4.5_0000491g0150 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.0e-18 94.4 232 31.9
Nitab4.5_0000043g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.0e-17 92.0 134 46.3
Nitab4.5_0013726g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.2e-17 91.7 126 46.8
CAN.G141.3 Capsicum annuum HOM05D003911 ORTHO05D002175 8.9e-17 90.9 95 53.7
CAN.G602.4 Capsicum annuum HOM05D003911 ORTHO05D002175 1.5e-16 90.1 126 45.2
Nitab4.5_0000347g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.0e-16 89.7 98 53.1
Nitab4.5_0000517g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.4e-16 89.0 126 46.8
Nitab4.5_0002999g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.4e-16 89.0 126 46.0
Nitab4.5_0000865g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.4e-16 88.6 97 51.5
CAN.G1243.2 Capsicum annuum HOM05D003911 ORTHO05D002175 5.7e-16 88.2 99 51.5
CAN.G2762.1 Capsicum annuum HOM05D003911 ORTHO05D002175 5.7e-16 88.2 99 51.5
CAN.G138.18 Capsicum annuum HOM05D003911 ORTHO05D002175 7.5e-16 87.8 104 48.1
Nitab4.5_0002897g0060 Nicotiana tabacum HOM05D003911 ORTHO05D002175 9.8e-16 87.4 85 57.6
Nitab4.5_0000043g0350 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.7e-15 86.7 103 52.4
Nitab4.5_0005092g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.7e-15 86.7 91 53.8
Nitab4.5_0022442g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.7e-15 86.7 150 42.7
Nitab4.5_0002823g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.8e-15 85.9 143 42.7
Nitab4.5_0012205g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.8e-15 85.9 97 50.5
CAN.G686.12 Capsicum annuum HOM05D003911 ORTHO05D002175 4.9e-15 85.1 103 47.6
Nitab4.5_0000702g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.9e-15 85.1 82 57.3
Nitab4.5_0001859g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.3e-15 84.7 96 53.1
Nitab4.5_0000056g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.4e-14 83.6 103 50.5
Nitab4.5_0000702g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.8e-14 83.2 106 49.1
Nitab4.5_0009406g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.4e-14 82.8 110 49.1
Nitab4.5_0001106g0090 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.1e-14 82.4 102 51.0
Nitab4.5_0004708g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.4e-14 81.6 126 43.7
Sopen12g018970 Solanum pennellii HOM05D003574 ORTHO05D002175 5.4e-14 81.6 89 55.1
Nitab4.5_0006161g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.2e-13 80.5 103 52.4
Nitab4.5_0007746g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.2e-13 80.5 103 50.5
Nitab4.5_0000051g0150 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.6e-13 80.1 95 52.6
CAN.G1364.7 Capsicum annuum HOM05D000163 ORTHO05D000219 2.0e-13 79.7 94 47.9
Nitab4.5_0001502g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.0e-13 79.7 126 44.4
Nitab4.5_0000989g0060 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.9e-13 78.2 97 50.5
CAN.G168.3 Capsicum annuum HOM05D003911 ORTHO05D002175 1.0e-12 77.4 87 52.9
Nitab4.5_0003336g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.7e-12 76.6 81 53.1
Nitab4.5_0000513g0090 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.9e-12 75.9 103 48.5
Nitab4.5_0005978g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.6e-12 74.7 66 62.1
Solyc12g038730.1 Solanum lycopersicum HOM05D003911 ORTHO05D002175 8.6e-12 74.3 57 75.4
Nitab4.5_0000722g0130 Nicotiana tabacum HOM05D003911 ORTHO05D010997 1.9e-11 73.2 88 51.1
Nitab4.5_0000142g0450 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.5e-11 72.8 126 41.3
Nitab4.5_0000199g0060 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.5e-11 72.8 93 48.4
Nitab4.5_0002999g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.3e-11 72.0 172 33.7
Nitab4.5_0002700g0210 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.6e-10 70.1 66 60.6
Nitab4.5_0000304g0090 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.6e-10 68.9 103 44.7
Nitab4.5_0011788g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.0e-10 67.8 72 55.6
Nitab4.5_0004620g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.0e-09 67.4 122 39.3
CAN.G148.6 Capsicum annuum HOM05D003911 ORTHO05D001773 1.4e-09 67.0 139 34.5
Nitab4.5_0008324g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.3e-09 66.2 145 36.6
Nitab4.5_0009953g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.2e-09 65.1 81 49.4
CAN.G267.2 Capsicum annuum HOM05D003911 ORTHO05D002175 1.2e-08 63.9 101 40.6
Nitab4.5_0001800g0080 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.2e-08 63.9 103 40.8
CAN.G19.1 Capsicum annuum HOM05D000703 ORTHO05D026988 2.0e-08 63.2 96 40.6
CAN.G1130.7 Capsicum annuum HOM05D000995 ORTHO05D001773 2.6e-08 62.8 71 50.7
Nitab4.5_0001772g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.7e-07 60.1 103 42.7
Nitab4.5_0003598g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.9e-07 59.3 52 65.4
Nitab4.5_0000205g0130 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.7e-07 58.9 85 43.5
PGSC0003DMG400041687 Solanum tuberosum HOM05D003911 ORTHO05D002175 4.9e-07 58.5 66 56.1
Nitab4.5_0000919g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.4e-07 58.2 99 41.4
Nitab4.5_0002735g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.4e-07 58.2 103 40.8
Nitab4.5_0014328g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.3e-07 57.8 145 34.5
Nitab4.5_0000005g0430 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.4e-06 57.0 103 39.8
Nitab4.5_0001168g0140 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.4e-06 57.0 103 38.8
CAN.G1050.1 Capsicum annuum HOM05D003911 ORTHO05D002175 1.9e-06 56.6 83 43.4
Nitab4.5_0000030g0290 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.4e-06 56.2 58 50.0
Nitab4.5_0001800g0090 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.4e-06 56.2 36 63.9
Nitab4.5_0000030g0180 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.2e-06 55.8 62 50.0
CAN.G117.3 Capsicum annuum HOM05D003911 ORTHO05D002175 4.1e-06 55.5 103 37.9
CAN.G264.19 Capsicum annuum HOM05D003911 ORTHO05D002175 4.1e-06 55.5 53 54.7
Nitab4.5_0001953g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.4e-06 55.1 126 32.5
Nitab4.5_0004222g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.4e-06 55.1 83 42.2
Nitab4.5_0013863g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 9.2e-06 54.3 119 36.1


User provided reference genes

Program Settings