Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen06g006480 Solanum pennellii HOM05D007827 ORTHO05D009749 1.5e-116 422.9 219 100.0
Solyc06g011440.1 Solanum lycopersicum HOM05D007827 ORTHO05D009749 7.3e-116 420.6 219 99.5
PGSC0003DMG400029878 Solanum tuberosum HOM05D007827 ORTHO05D009749 1.9e-87 326.2 221 80.5
Nitab4.5_0000972g0020 Nicotiana tabacum HOM05D007827 ORTHO05D009749 3.4e-73 278.9 232 72.0
CAN.G130.10 Capsicum annuum HOM05D007827 ORTHO05D009749 8.4e-72 274.2 225 70.7
Nitab4.5_0007177g0010 Nicotiana tabacum HOM05D007827 ORTHO05D009749 9.3e-71 270.8 229 70.3
Peaxi162Scf01001g00001 Petunia axillaris HOM05D007827 ORTHO05D009749 8.7e-61 237.7 232 62.1
Peaxi162Scf00297g00062 Petunia axillaris HOM05D007827 ORTHO05D009749 1.1e-39 167.5 247 47.0
Nitab4.5_0007037g0010 Nicotiana tabacum HOM05D007827 ORTHO05D009749 2.5e-39 166.4 247 45.7
Nitab4.5_0002039g0090 Nicotiana tabacum HOM05D007827 ORTHO05D009749 3.2e-39 166.0 247 45.7
Solyc08g062840.1 Solanum lycopersicum HOM05D007827 ORTHO05D009749 5.3e-34 148.7 245 44.5
PGSC0003DMG400008199 Solanum tuberosum HOM05D007827 ORTHO05D009749 7.7e-33 144.8 244 44.3
CSS0031213 Camellia sinensis var. sinensis HOM05D007827 ORTHO05D009749 1.5e-28 130.6 243 43.6
Sopen08g018370 Solanum pennellii HOM05D007827 ORTHO05D009749 2.0e-28 130.2 216 44.9
Cc08_g10870 Coffea canephora HOM05D007827 ORTHO05D009749 3.3e-28 129.4 252 38.5
Rhsim11G0042400 Rhododendron simsii HOM05D007827 ORTHO05D009749 3.1e-26 122.9 227 40.1
Hma1.2p1_0801F.1_g220250 Hydrangea macrophylla HOM05D007827 ORTHO05D009749 2.2e-24 116.7 233 37.8
CSS0026056 Camellia sinensis var. sinensis HOM05D007827 ORTHO05D009749 3.2e-23 112.8 205 40.5
Oeu018628.1 Olea europaea HOM05D007827 ORTHO05D009749 1.2e-22 110.9 219 39.3
Actinidia01227 Actinidia chinensis HOM05D007827 ORTHO05D009749 8.0e-22 108.2 226 39.8
Dinv28003 Davidia involucrata HOM05D007827 ORTHO05D009749 8.8e-21 104.8 227 37.9
Hma1.2p1_1933F.1_g308040 Hydrangea macrophylla HOM05D007827 ORTHO05D009749 1.5e-20 104.0 233 34.8
CSS0004361 Camellia sinensis var. sinensis HOM05D007827 ORTHO05D009749 6.3e-19 98.6 238 34.9
Lsat_1_v5_gn_6_13921 Lactuca sativa HOM05D007827 ORTHO05D009749 4.1e-18 95.9 230 36.1
Sabra06G0174900 Salix brachista HOM05D007827 ORTHO05D009749 7.0e-18 95.1 211 37.0
Aqoxy7G01166 Aquilegia oxysepala HOM05D007827 ORTHO05D009749 9.1e-18 94.7 231 34.2
Haze_18158 Corylus avellana HOM05D007827 ORTHO05D009749 9.1e-18 94.7 232 36.6
CSS0037057 Camellia sinensis var. sinensis HOM05D007827 ORTHO05D009749 7.7e-17 91.7 209 38.3
CiPaw.16G027300 Carya illinoinensis HOM05D007827 ORTHO05D009749 2.2e-16 90.1 224 33.9
MD15G1056900 Malus domestica HOM05D007827 ORTHO05D009749 2.2e-16 90.1 212 34.4
DCAR_003136 Daucus carota HOM05D007827 ORTHO05D009749 2.9e-16 89.7 219 34.2
QL02p000760 Quercus lobata HOM05D007827 ORTHO05D009749 6.5e-16 88.6 209 35.9
Potri.006G226200 Populus trichocarpa HOM05D007827 ORTHO05D009749 1.5e-15 87.4 210 37.6
SalBow4G1896 Salvia bowleyana HOM05D007827 ORTHO05D009749 1.9e-15 87.0 143 42.7
ClCG08G010040 Citrullus lanatus HOM05D007827 ORTHO05D009749 2.5e-15 86.7 219 30.1
Lalb_Chr23g0267841 Lupinus albus HOM05D007827 ORTHO05D009749 1.2e-14 84.3 208 32.7
Cpa.g.sc7.157 Carica papaya HOM05D007827 ORTHO05D009749 8.0e-14 81.6 222 34.2
Lj1g0018619 Lotus japonicus HOM05D007827 ORTHO05D009749 8.0e-14 81.6 217 31.8
Migut.A00115 Erythranthe guttata HOM05D007827 ORTHO05D009749 1.0e-13 81.3 64 62.5
Atru.chr7.1942 Acer truncatum HOM05D007827 ORTHO05D009749 1.8e-13 80.5 66 63.6
Manes.16G082000 Manihot esculenta HOM05D007827 ORTHO05D009749 1.8e-13 80.5 206 34.5
MELO3C011460.2 Cucumis melo HOM05D007827 ORTHO05D009749 1.2e-12 77.8 208 31.7
Oeu047101.1 Olea europaea HOM05D007827 ORTHO05D009749 1.2e-12 77.8 193 34.2
Phvul.009G078700 Phaseolus vulgaris HOM05D007827 ORTHO05D009749 1.5e-12 77.4 222 30.6
CsaV3_6G032200 Cucumis sativus L. HOM05D007827 ORTHO05D009749 2.0e-12 77.0 205 31.7
MBI04_g36906_MAGBIO Magnolia biondii HOM05D007827 ORTHO05D009749 2.6e-12 76.6 235 30.2
Medtr3g104620 Medicago truncatula HOM05D007827 ORTHO05D009749 3.4e-12 76.3 238 29.0
Prupe.1G409500 Prunus persica HOM05D007827 ORTHO05D009749 4.4e-12 75.9 222 31.1
SGA_v2.0_scaffold20G09207 Striga asiatica HOM05D007827 ORTHO05D009749 5.7e-12 75.5 148 41.2
Glyma.04G052400 Glycine max HOM05D007827 ORTHO05D009749 9.8e-12 74.7 131 38.2
Gohir.D05G042650 Gossypium hirsutum HOM05D007827 ORTHO05D009749 2.2e-11 73.6 184 30.4
Gorai.009G043700 Gossypium raimondii HOM05D007827 ORTHO05D009749 2.8e-11 73.2 183 30.1
TAR626G1076 Trochodendron aralioides HOM05D007827 ORTHO05D009749 1.4e-10 70.9 147 36.1
Lj5g0025960 Lotus japonicus HOM05D007827 ORTHO05D009749 1.8e-10 70.5 241 30.3
HPP92_009146 Vanilla planifolia HOM05D007827 ORTHO05D009749 3.1e-10 69.7 131 35.1
ATR0789G035 Amborella trichopoda HOM05D007827 ORTHO05D009749 4.1e-10 69.3 88 44.3
Sed0025262 Sechium edule HOM05D007827 ORTHO05D009749 4.1e-10 69.3 202 32.2
Psat5g036160 Pisum sativum HOM05D007827 ORTHO05D009749 7.0e-10 68.6 230 28.7
TPR.G3528 Trifolium pratense HOM05D007827 ORTHO05D009749 9.2e-10 68.2 268 28.7
unitig_37.g12945 Utricularia gibba HOM05D007827 ORTHO05D009749 9.2e-10 68.2 60 51.7
VMungo1309G0458 Vigna mungo HOM05D007827 ORTHO05D009749 9.2e-10 68.2 218 27.5
RcHm_v2.0_Chr6g0311201 Rosa chinensis HOM05D007827 ORTHO05D009749 1.2e-09 67.8 174 33.3
HPP92_007654 Vanilla planifolia HOM05D007827 ORTHO05D009749 1.6e-09 67.4 64 48.4
Thecc.09G056900 Theobroma cacao HOM05D007827 ORTHO05D009749 2.0e-09 67.0 220 27.7
ECA240G3049 Erigeron canadensis HOM05D007827 ORTHO05D009749 3.5e-09 66.2 233 30.9
Sed0014394 Sechium edule HOM05D007827 ORTHO05D009749 4.5e-09 65.9 206 31.1
SGA_v2.0_scaffold169G38700 Striga asiatica HOM05D007827 ORTHO05D009749 1.0e-08 64.7 74 41.9
arahy.Tifrunner.gnm1.ann1.S72ULK Arachis hypogaea HOM05D007827 ORTHO05D009749 2.3e-08 63.5 219 31.5
Glyma.14G097100 Glycine max HOM05D007827 ORTHO05D009749 3.8e-08 62.8 257 27.2
Phvul.001G037300 Phaseolus vulgaris HOM05D007827 ORTHO05D009749 8.6e-08 61.6 249 26.1
arahy.Tifrunner.gnm1.ann1.WVJ8VS Arachis hypogaea HOM05D007827 ORTHO05D009749 1.1e-07 61.2 205 28.8
FAN24G3029 Fragaria x ananassa HOM05D007827 ORTHO05D009749 2.5e-07 60.1 252 27.8
Ciclev10010468m.g Citrus clementina HOM05D007827 ORTHO05D009749 3.3e-07 59.7 127 36.2
THA.LOC104799160 Tarenaya hassleriana HOM05D007827 ORTHO05D009749 4.3e-07 59.3 199 30.2
FvH4_2g31620 Fragaria vesca HOM05D007827 ORTHO05D009749 5.6e-07 58.9 251 27.9
COL.COLO4_08756 Corchorus olitorius HOM05D030950 ORTHO05D009749 2.8e-06 56.6 231 27.7
Gohir.A05G040950 Gossypium hirsutum HOM05D007827 ORTHO05D009749 3.6e-06 56.2 183 29.0
Medtr1g015840 Medicago truncatula HOM05D007827 ORTHO05D009749 4.7e-06 55.8 218 29.8
TPR.G13014 Trifolium pratense HOM05D007827 ORTHO05D009749 6.1e-06 55.5 175 32.6


User provided reference genes

Program Settings