Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen06g006080 Solanum pennellii HOM05D007522 ORTHO05D009518 2.9e-135 485.3 261 100.0
Solyc06g011403.1 Solanum lycopersicum HOM05D007522 ORTHO05D009518 4.6e-133 478.0 261 98.5
Peaxi162Scf00267g00097 Petunia axillaris HOM05D007522 ORTHO05D009518 1.9e-94 349.7 257 73.5
Oeu014660.1 Olea europaea HOM05D007522 ORTHO05D009518 7.7e-64 248.1 255 56.5
TAR383G0977 Trochodendron aralioides HOM05D007522 ORTHO05D009518 3.8e-63 245.7 257 55.6
Migut.A00284 Erythranthe guttata HOM05D007522 ORTHO05D009518 7.2e-62 241.5 248 56.9
QL12p031480 Quercus lobata HOM05D007522 ORTHO05D009518 9.4e-62 241.1 257 55.6
CSS0007980 Camellia sinensis var. sinensis HOM05D007522 ORTHO05D009518 1.0e-60 237.7 254 52.4
Gorai.013G238600 Gossypium raimondii HOM05D007522 ORTHO05D009518 5.2e-60 235.3 254 54.3
Gohir.D13G209500 Gossypium hirsutum HOM05D007522 ORTHO05D009518 6.7e-60 235.0 254 54.3
Duzib187G1360 Durio zibethinus HOM05D007522 ORTHO05D009518 8.8e-60 234.6 219 61.2
Actinidia13430 Actinidia chinensis HOM05D007522 ORTHO05D009518 2.6e-59 233.0 259 53.3
Gohir.A13G204200 Gossypium hirsutum HOM05D007522 ORTHO05D009518 3.3e-59 232.6 254 53.9
CiPaw.07G218500 Carya illinoinensis HOM05D007522 ORTHO05D009518 9.7e-59 231.1 251 55.0
COL.COLO4_24044 Corchorus olitorius HOM05D007522 ORTHO05D009518 2.8e-58 229.6 265 51.7
GSVIVG01035795001 Vitis vinifera HOM05D007522 ORTHO05D009518 2.8e-58 229.6 254 52.8
MSTRG.25867 Avicennia marina HOM05D007522 ORTHO05D009518 3.7e-58 229.2 252 53.2
Potri.006G247900 Populus trichocarpa HOM05D007522 ORTHO05D009518 4.8e-58 228.8 256 53.5
Cc11_g01290 Coffea canephora HOM05D007522 ORTHO05D009518 3.1e-57 226.1 231 56.7
arahy.Tifrunner.gnm1.ann1.J4BCXN Arachis hypogaea HOM05D007522 ORTHO05D009518 9.1e-57 224.6 259 49.8
Manes.03G065616 Manihot esculenta HOM05D007522 ORTHO05D009518 3.5e-56 222.6 255 52.9
Ciclev10009234m.g Citrus clementina HOM05D007522 ORTHO05D009518 7.7e-56 221.5 250 52.0
Prupe.1G467900 Prunus persica HOM05D007522 ORTHO05D009518 1.7e-55 220.3 250 52.8
HanXRQChr13g0402121 Helianthus annuus HOM05D007522 ORTHO05D009518 2.2e-55 219.9 255 51.4
PSO782G1743 Papaver somniferum HOM05D007522 ORTHO05D009518 2.2e-55 219.9 254 53.1
Lalb_Chr08g0243841 Lupinus albus HOM05D007522 ORTHO05D009518 1.9e-54 216.9 247 49.8
PGR044G0714 Punica granatum HOM05D007522 ORTHO05D009518 4.2e-54 215.7 252 50.0
FAN15G2839 Fragaria x ananassa HOM05D007522 ORTHO05D009518 1.2e-53 214.2 250 48.4
FvH4_2g30000 Fragaria vesca HOM05D007522 ORTHO05D009518 2.7e-53 213.0 250 48.0
arahy.Tifrunner.gnm1.ann1.EE81AI Arachis hypogaea HOM05D007522 ORTHO05D009518 3.6e-53 212.6 218 53.7
Sed0015375 Sechium edule HOM05D007522 ORTHO05D009518 3.6e-53 212.6 255 49.8
Glyma.06G072500 Glycine max HOM05D007522 ORTHO05D009518 8.0e-53 211.5 246 48.8
TPR.G34679 Trifolium pratense HOM05D007522 ORTHO05D009518 8.0e-53 211.5 240 48.3
CsaV3_2G031690 Cucumis sativus L. HOM05D007522 ORTHO05D009518 1.0e-52 211.1 251 50.6
Sabra06G0193900 Salix brachista HOM05D007522 ORTHO05D009518 1.0e-52 211.1 243 51.4
RcHm_v2.0_Chr6g0312911 Rosa chinensis HOM05D007522 ORTHO05D009518 1.4e-52 210.7 250 48.8
Carub.0007s0799 Capsella rubella HOM05D007522 ORTHO05D009518 8.8e-52 208.0 254 49.2
CARHR240530 Cardamine hirsuta HOM05D007522 ORTHO05D009518 8.8e-52 208.0 254 49.6
Phvul.009G097000 Phaseolus vulgaris HOM05D007522 ORTHO05D009518 1.5e-51 207.2 247 46.6
C01p06400 Brassica napus HOM05D007522 ORTHO05D009518 2.0e-51 206.8 254 49.6
BolC1t00636H Brassica oleracea HOM05D007522 ORTHO05D009518 2.0e-51 206.8 254 49.6
Thhalv10025779m.g Eutrema salsugineum HOM05D007522 ORTHO05D009518 2.6e-51 206.5 254 49.2
BraA01t00551Z Brassica rapa HOM05D007522 ORTHO05D009518 3.4e-51 206.1 254 48.8
AL7G19200 Arabidopsis lyrata HOM05D007522 ORTHO05D009518 9.8e-51 204.5 248 49.6
BcaC09g52047 Brassica carinata HOM05D007522 ORTHO05D009518 9.8e-51 204.5 254 48.8
Lsat_1_v5_gn_6_22860 Lactuca sativa HOM05D007522 ORTHO05D009518 1.3e-50 204.1 241 51.5
AT4G32560 Arabidopsis thaliana HOM05D007522 ORTHO05D009518 1.7e-50 203.8 254 48.4
A01p05830 Brassica napus HOM05D007522 ORTHO05D009518 3.7e-50 202.6 254 48.4
Eucgr.C02839 Eucalyptus grandis HOM05D007522 ORTHO05D009518 3.7e-50 202.6 263 46.0
MELO3C011219.2 Cucumis melo HOM05D007522 ORTHO05D009518 6.3e-50 201.8 257 49.4
MD15G1116400 Malus domestica HOM05D007522 ORTHO05D009518 6.3e-50 201.8 250 48.0
ECA233G0736 Erigeron canadensis HOM05D007522 ORTHO05D009518 1.8e-49 200.3 245 49.0
Nn8g39310 Nelumbo nucifera HOM05D007522 ORTHO05D009518 1.8e-49 200.3 159 69.2
Sp7g30340 Schrenkiella parvula HOM05D007522 ORTHO05D009518 1.8e-49 200.3 253 49.8
VMungo1309G1471 Vigna mungo HOM05D007522 ORTHO05D009518 3.1e-49 199.5 258 46.5
Thecc.09G145600 Theobroma cacao HOM05D007522 ORTHO05D009518 4.1e-49 199.1 219 54.3
FAN24G0147 Fragaria x ananassa HOM05D007522 ORTHO05D009518 5.4e-49 198.7 241 47.3
Eucgr.C02850 Eucalyptus grandis HOM05D007522 ORTHO05D009518 2.0e-48 196.8 263 45.6
PSO063G3677 Papaver somniferum HOM05D007522 ORTHO05D009518 2.0e-48 196.8 242 49.6
Atru.chr7.2341 Acer truncatum HOM05D007522 ORTHO05D009518 2.7e-48 196.4 196 58.7
Lj1g0002015 Lotus japonicus HOM05D007522 ORTHO05D009518 2.7e-48 196.4 243 47.3
Ca_15704_v3 Cicer arietinum L. HOM05D000186 ORTHO05D001124 3.5e-48 196.1 254 45.3
Medtr3g108530 Medicago truncatula HOM05D007522 ORTHO05D009518 4.5e-48 195.7 259 44.0
Aa31LG4G11730 Aethionema arabicum HOM05D007522 ORTHO05D009518 7.7e-48 194.9 265 46.4
ATR0083G062 Amborella trichopoda HOM05D007522 ORTHO05D009518 2.9e-47 193.0 253 47.0
THA.LOC104819887 Tarenaya hassleriana HOM05D007522 ORTHO05D009518 2.9e-47 193.0 288 44.4
EL10Ac2g02553 Beta vulgaris HOM05D007522 ORTHO05D009518 2.5e-46 189.9 243 47.7
CANSAT11G2673 Cannabis sativa HOM05D007522 ORTHO05D009518 9.4e-46 188.0 186 56.5
Aqoxy2G01954 Aquilegia oxysepala HOM05D007522 ORTHO05D009518 3.6e-45 186.0 234 50.4
AUR62032367 Chenopodium quinoa HOM05D007522 ORTHO05D009518 6.8e-44 181.8 205 53.2
FAN27G1610 Fragaria x ananassa HOM05D007522 ORTHO05D009518 4.9e-42 175.6 215 46.5
Rhsim02G0189000 Rhododendron simsii HOM05D007522 ORTHO05D009518 1.6e-40 170.6 197 54.3
Pp3c10_19840 Physcomitrium patens HOM05D007522 ORTHO05D009518 1.0e-39 167.9 247 40.1
Mapoly0015s0053 Marchantia polymorpha HOM05D007522 ORTHO05D009518 1.3e-39 167.5 247 38.1
Eucgr.C02854 Eucalyptus grandis HOM05D007522 ORTHO05D009518 8.6e-39 164.9 202 49.0
AagrBONN_evm.TU.Sc2ySwM_117.2977 Anthoceros agrestis HOM05D007522 ORTHO05D009518 1.1e-38 164.5 257 38.1
Eucgr.C02843 Eucalyptus grandis HOM05D007522 ORTHO05D009518 1.1e-38 164.5 202 49.0
Eucgr.L02345 Eucalyptus grandis HOM05D007522 ORTHO05D009518 4.3e-38 162.5 202 48.5
Psat0s1782g0120 Pisum sativum HOM05D007522 ORTHO05D009518 5.6e-38 162.2 178 49.4
vmacro11126 Vaccinium macrocarpon HOM05D007522 ORTHO05D009518 1.2e-37 161.0 323 39.0
Dinv30202 Davidia involucrata HOM05D007522 ORTHO05D009518 2.1e-37 160.2 178 54.5
HPP92_008699 Vanilla planifolia HOM05D002348 ORTHO05D002512 5.7e-35 152.1 253 39.9
Ah.10g025820 Amaranthus hybridus HOM05D007522 ORTHO05D009518 4.6e-32 142.5 159 50.3
Cpa.g.sc91.26 Carica papaya HOM05D007522 ORTHO05D009518 1.7e-31 140.6 236 41.1
SalBow8G3415 Salvia bowleyana HOM05D007522 ORTHO05D009518 2.5e-30 136.7 107 68.2
CDE02G2364 Ceratophyllum demersum HOM05D007522 ORTHO05D009518 1.6e-29 134.0 158 49.4
AUR62024852 Chenopodium quinoa HOM05D007522 ORTHO05D009518 1.7e-26 124.0 268 38.4
CBR_g51241 Chara braunii HOM05D007522 ORTHO05D009518 1.0e-23 114.8 181 35.9
Haze_21613 Corylus avellana HOM05D007522 ORTHO05D009518 6.6e-23 112.1 210 38.1
MD08G1138500 Malus domestica HOM05D007522 ORTHO05D009518 8.1e-21 105.1 96 59.4
CBR_g75925 Chara braunii HOM05D007522 ORTHO05D009518 5.2e-20 102.4 136 41.2
SEGI_07807 Sequoiadendron giganteum HOM05D007522 ORTHO05D009518 4.0e-12 76.3 75 53.3
Cfa021321 Carpinus fangiana HOM05D007522 ORTHO05D009518 2.2e-10 70.5 89 48.3
MD08G1138600 Malus domestica HOM05D007522 ORTHO05D009518 3.8e-10 69.7 122 36.9
Glyma.04G070700 Glycine max HOM05D007522 ORTHO05D009518 8.4e-10 68.6 131 33.6


User provided reference genes

Program Settings