Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen06g005890 Solanum pennellii HOM05D010988 ORTHO05D000137 4.7e-88 327.8 161 100.0
PGSC0003DMG400042934 Solanum tuberosum HOM05D010988 ORTHO05D000034 2.5e-49 199.1 127 76.4
Sopen05g015890 Solanum pennellii HOM05D010988 ORTHO05D000137 7.1e-44 181.0 127 70.9
PGSC0003DMG400043182 Solanum tuberosum HOM05D000679 ORTHO05D000137 8.2e-40 167.5 104 76.9
Solyc09g150135.1 Solanum lycopersicum HOM05D010988 ORTHO05D000137 9.3e-36 154.1 241 41.5
PGSC0003DMG400011084 Solanum tuberosum HOM05D010988 ORTHO05D000137 8.7e-34 147.5 94 77.7
Sopen09g020240 Solanum pennellii HOM05D010988 ORTHO05D000137 1.4e-31 140.2 209 41.6
Sopen12g022620 Solanum pennellii HOM05D010988 ORTHO05D000137 1.8e-31 139.8 208 41.8
Sopen06g011950 Solanum pennellii HOM05D010988 ORTHO05D000137 4.3e-25 118.6 80 72.5
Sopen07g022280 Solanum pennellii HOM05D010988 ORTHO05D000137 8.2e-24 114.4 100 61.0
Solyc07g041820.3 Solanum lycopersicum HOM05D010988 ORTHO05D000137 1.8e-23 113.2 196 39.8
Nitab4.5_0000983g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000482 1.4e-20 103.6 212 33.5
Nitab4.5_0008647g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000482 1.4e-20 103.6 212 33.5
Nitab4.5_0006099g0040 Nicotiana tabacum HOM05D000679 ORTHO05D000482 7.2e-20 101.3 215 34.4
Nitab4.5_0000464g0070 Nicotiana tabacum HOM05D000679 ORTHO05D000482 6.1e-19 98.2 161 36.0
Nitab4.5_0002151g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.0e-18 97.4 212 32.5
CAN.G226.24 Capsicum annuum HOM05D000679 ORTHO05D000137 3.0e-18 95.9 133 41.4
Nitab4.5_0014318g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000482 8.8e-18 94.4 184 33.7
Nitab4.5_0007686g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000482 1.5e-17 93.6 213 31.9
Sopen07g014970 Solanum pennellii HOM05D000679 ORTHO05D000482 2.0e-17 93.2 122 41.0
Sopen11g024470 Solanum pennellii HOM05D000679 ORTHO05D000482 3.3e-17 92.4 122 40.2
Nitab4.5_0002353g0050 Nicotiana tabacum HOM05D000679 ORTHO05D000482 4.4e-17 92.0 213 32.4
Sopen09g026450 Solanum pennellii HOM05D000679 ORTHO05D000137 4.4e-17 92.0 122 39.3
Solyc06g050740.1 Solanum lycopersicum HOM05D000679 ORTHO05D000482 5.7e-17 91.7 112 41.1
Solyc10g150119.1 Solanum lycopersicum HOM05D010988 ORTHO05D000137 1.3e-16 90.5 70 67.1
Sopen10g010760 Solanum pennellii HOM05D000002 ORTHO05D000001 1.3e-16 90.5 75 53.3
Nitab4.5_0022521g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000482 1.7e-16 90.1 188 34.6
Nitab4.5_0001018g0090 Nicotiana tabacum HOM05D000679 ORTHO05D000482 2.2e-16 89.7 119 42.0
Nitab4.5_0017301g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000482 3.7e-16 89.0 142 37.3
Sopen01g022800 Solanum pennellii HOM05D000679 ORTHO05D000482 3.7e-16 89.0 122 39.3
Solyc03g034207.1 Solanum lycopersicum HOM05D000679 ORTHO05D000482 4.8e-16 88.6 87 47.1
Sopen11g011100 Solanum pennellii HOM05D010988 ORTHO05D000137 4.8e-16 88.6 58 77.6
Solyc08g014616.1 Solanum lycopersicum HOM05D000679 ORTHO05D000482 8.2e-16 87.8 122 38.5
Nitab4.5_0002750g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000482 1.4e-15 87.0 131 37.4
Nitab4.5_0003533g0100 Nicotiana tabacum HOM05D000679 ORTHO05D000482 2.4e-15 86.3 117 39.3
Nitab4.5_0008752g0040 Nicotiana tabacum HOM05D000679 ORTHO05D000482 9.1e-15 84.3 117 38.5
Sopen05g023260 Solanum pennellii HOM05D010988 ORTHO05D000137 9.1e-15 84.3 58 72.4
Solyc08g048507.1 Solanum lycopersicum HOM05D010988 ORTHO05D000137 2.0e-14 83.2 174 35.1
Nitab4.5_0005869g0040 Nicotiana tabacum HOM05D000679 ORTHO05D000482 2.6e-14 82.8 144 34.7
Nitab4.5_0014780g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000482 3.4e-14 82.4 160 34.4
CAN.G1077.11 Capsicum annuum HOM05D000679 ORTHO05D000137 7.7e-14 81.3 116 39.7
CAN.G413.23 Capsicum annuum HOM05D000679 ORTHO05D000137 1.3e-13 80.5 118 39.8
Nitab4.5_0013794g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000482 2.2e-13 79.7 78 46.2
Nitab4.5_0000425g0130 Nicotiana tabacum HOM05D000679 ORTHO05D000137 5.0e-13 78.6 191 31.9
CAN.G575.73 Capsicum annuum HOM05D000679 ORTHO05D000137 1.1e-12 77.4 116 38.8
CAN.G637.41 Capsicum annuum HOM05D000679 ORTHO05D000137 1.4e-12 77.0 120 37.5
Nitab4.5_0002879g0130 Nicotiana tabacum HOM05D000679 ORTHO05D000482 1.4e-12 77.0 186 31.2
Nitab4.5_0008559g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000482 1.4e-12 77.0 184 31.5
Nitab4.5_0014452g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000482 1.4e-12 77.0 85 41.2
Nitab4.5_0002059g0080 Nicotiana tabacum HOM05D000679 ORTHO05D000482 2.5e-12 76.3 143 35.7
Nitab4.5_0001425g0150 Nicotiana tabacum HOM05D000679 ORTHO05D000482 4.2e-12 75.5 221 29.9
Nitab4.5_0010113g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000482 5.5e-12 75.1 142 35.9
PGSC0003DMG400046174 Solanum tuberosum HOM05D000679 ORTHO05D000482 7.2e-12 74.7 70 48.6
CAN.G1247.1 Capsicum annuum HOM05D000679 ORTHO05D000482 1.2e-11 73.9 101 38.6
CAN.G971.1 Capsicum annuum HOM05D000679 ORTHO05D000137 1.2e-11 73.9 115 35.7
PGSC0003DMG400019312 Solanum tuberosum HOM05D000679 ORTHO05D000482 4.7e-11 72.0 127 32.3
CAN.G1659.8 Capsicum annuum HOM05D000679 ORTHO05D000137 1.0e-10 70.9 118 37.3
Nitab4.5_0001115g0100 Nicotiana tabacum HOM05D000679 ORTHO05D000482 1.4e-10 70.5 76 44.7
Sopen00g004650 Solanum pennellii HOM05D000679 ORTHO05D000137 1.4e-10 70.5 155 31.6
Sopen01g032160 Solanum pennellii HOM05D000541 ORTHO05D012255 2.3e-10 69.7 167 28.7
Sopen01g053420 Solanum pennellii HOM05D000679 ORTHO05D014266 2.3e-10 69.7 64 46.9
PGSC0003DMG400004494 Solanum tuberosum HOM05D000541 ORTHO05D012255 2.3e-10 69.7 166 28.9
CAN.G362.44 Capsicum annuum HOM05D000679 ORTHO05D000137 3.9e-10 68.9 119 37.0
Sopen00g004430 Solanum pennellii HOM05D000679 ORTHO05D000482 3.9e-10 68.9 128 33.6
CAN.G1245.5 Capsicum annuum HOM05D000679 ORTHO05D000137 5.2e-10 68.6 130 33.8
Nitab4.5_0006644g0120 Nicotiana tabacum HOM05D000679 ORTHO05D000482 5.2e-10 68.6 74 41.9
Sopen12g022010 Solanum pennellii HOM05D000002 ORTHO05D000001 5.2e-10 68.6 64 46.9
Sopen01g014180 Solanum pennellii HOM05D000679 ORTHO05D000137 6.7e-10 68.2 131 32.8
Sopen10g007210 Solanum pennellii HOM05D000679 ORTHO05D000137 8.8e-10 67.8 106 33.0
Sopen03g025990 Solanum pennellii HOM05D000679 ORTHO05D030640 1.1e-09 67.4 151 31.1
Sopen08g011320 Solanum pennellii HOM05D000541 ORTHO05D000137 1.5e-09 67.0 117 32.5
Nitab4.5_0008941g0050 Nicotiana tabacum HOM05D000679 ORTHO05D000482 2.0e-09 66.6 63 50.8
Sopen01g037260 Solanum pennellii HOM05D000541 ORTHO05D000137 2.0e-09 66.6 122 33.6
Sopen07g022050 Solanum pennellii HOM05D000679 ORTHO05D000482 2.0e-09 66.6 147 32.0
Sopen08g017460 Solanum pennellii HOM05D000541 ORTHO05D000137 2.0e-09 66.6 122 33.6
Sopen11g029170 Solanum pennellii HOM05D000541 ORTHO05D000137 2.0e-09 66.6 122 33.6
PGSC0003DMG400034712 Solanum tuberosum HOM05D000679 ORTHO05D014686 2.0e-09 66.6 125 34.4
Sopen04g016450 Solanum pennellii HOM05D000541 ORTHO05D000137 2.6e-09 66.2 126 33.3
Sopen07g023480 Solanum pennellii HOM05D000541 ORTHO05D000137 2.6e-09 66.2 122 33.6
Sopen05g027730 Solanum pennellii HOM05D000679 ORTHO05D000137 3.3e-09 65.9 136 33.1
Sopen00g005350 Solanum pennellii HOM05D000541 ORTHO05D000137 4.4e-09 65.5 117 31.6
Nitab4.5_0007978g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000482 5.7e-09 65.1 72 43.1
Sopen01g016320 Solanum pennellii HOM05D000679 ORTHO05D000482 5.7e-09 65.1 121 33.1
Sopen08g027430 Solanum pennellii HOM05D000679 ORTHO05D030640 5.7e-09 65.1 138 29.0
CAN.G1392.3 Capsicum annuum HOM05D001503 ORTHO05D003820 7.4e-09 64.7 74 41.9
Sopen02g006090 Solanum pennellii HOM05D000541 ORTHO05D000137 7.4e-09 64.7 126 32.5
Sopen01g048340 Solanum pennellii HOM05D000067 ORTHO05D000280 9.7e-09 64.3 83 37.3
Sopen06g029680 Solanum pennellii HOM05D000679 ORTHO05D000137 9.7e-09 64.3 138 29.0
Sopen04g016430 Solanum pennellii HOM05D000541 ORTHO05D000137 1.7e-08 63.5 125 32.8
Nitab4.5_0000576g0030 Nicotiana tabacum HOM05D006812 ORTHO05D000482 2.2e-08 63.2 178 28.7
Sopen02g001060 Solanum pennellii HOM05D000541 ORTHO05D000137 2.2e-08 63.2 117 29.9
Sopen02g032120 Solanum pennellii HOM05D000541 ORTHO05D000137 2.2e-08 63.2 117 29.9
Sopen06g004070 Solanum pennellii HOM05D000541 ORTHO05D000137 2.2e-08 63.2 122 32.0
PGSC0003DMG400006343 Solanum tuberosum HOM05D000679 ORTHO05D000482 2.2e-08 63.2 66 39.4
Sopen06g015940 Solanum pennellii HOM05D000679 ORTHO05D000482 2.8e-08 62.8 121 32.2
Solyc01g094420.3 Solanum lycopersicum HOM05D005063 ORTHO05D000482 3.7e-08 62.4 157 28.7
Sopen04g019360 Solanum pennellii HOM05D000004 ORTHO05D000002 3.7e-08 62.4 122 31.1
Sopen01g038220 Solanum pennellii HOM05D005063 ORTHO05D000482 6.3e-08 61.6 159 29.6
Sopen04g010090 Solanum pennellii HOM05D000679 ORTHO05D000137 6.3e-08 61.6 116 31.0
Nitab4.5_0004192g0010 Nicotiana tabacum HOM05D006812 ORTHO05D000482 1.1e-07 60.8 169 27.8
PGSC0003DMG400023258 Solanum tuberosum HOM05D000541 ORTHO05D000137 1.1e-07 60.8 129 30.2
PGSC0003DMG400000031 Solanum tuberosum HOM05D005063 ORTHO05D000482 1.4e-07 60.5 157 27.4
Nitab4.5_0000036g0320 Nicotiana tabacum HOM05D000679 ORTHO05D000137 4.1e-07 58.9 105 32.4
PGSC0003DMG400037565 Solanum tuberosum HOM05D000679 ORTHO05D000137 4.1e-07 58.9 138 35.5
Nitab4.5_0000335g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000482 5.3e-07 58.5 120 31.7
PGSC0003DMG400011887 Solanum tuberosum HOM05D000541 ORTHO05D000137 5.3e-07 58.5 120 30.8
CAN.G20.4 Capsicum annuum HOM05D000541 ORTHO05D000482 7.0e-07 58.2 89 32.6
Nitab4.5_0007528g0010 Nicotiana tabacum HOM05D006812 ORTHO05D000482 9.1e-07 57.8 154 28.6
Sopen03g030640 Solanum pennellii HOM05D005797 ORTHO05D006479 9.1e-07 57.8 122 29.5
PGSC0003DMG400014993 Solanum tuberosum HOM05D000541 ORTHO05D000137 9.1e-07 57.8 120 30.8
Nitab4.5_0002005g0040 Nicotiana tabacum HOM05D000679 ORTHO05D000482 1.2e-06 57.4 62 40.3
Nitab4.5_0002993g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000482 1.2e-06 57.4 163 31.3
CAN.G158.15 Capsicum annuum HOM05D000541 ORTHO05D000137 2.0e-06 56.6 80 36.2
Nitab4.5_0001472g0100 Nicotiana tabacum HOM05D000679 ORTHO05D000137 2.0e-06 56.6 121 29.8
Sopen09g010700 Solanum pennellii HOM05D000541 ORTHO05D000137 2.0e-06 56.6 121 31.4
CAN.G1036.11 Capsicum annuum HOM05D000541 ORTHO05D000137 2.6e-06 56.2 171 26.9
Sopen10g022330 Solanum pennellii HOM05D000004 ORTHO05D000002 2.6e-06 56.2 53 58.5
PGSC0003DMG400027246 Solanum tuberosum HOM05D000541 ORTHO05D000137 3.5e-06 55.8 120 30.8
CAN.G1389.27 Capsicum annuum HOM05D000541 ORTHO05D000137 5.9e-06 55.1 89 32.6
CAN.G726.5 Capsicum annuum HOM05D000541 ORTHO05D000137 5.9e-06 55.1 88 33.0
Nitab4.5_0001019g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000482 5.9e-06 55.1 132 28.0
Sopen05g009010 Solanum pennellii HOM05D000541 ORTHO05D000137 5.9e-06 55.1 121 31.4
CAN.G546.61 Capsicum annuum HOM05D000541 ORTHO05D000137 7.7e-06 54.7 134 30.6


User provided reference genes

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