Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen06g005750 Solanum pennellii HOM05D007844 ORTHO05D011078 2.2e-76 288.9 145 100.0
PGSC0003DMG400029095 Solanum tuberosum HOM05D007844 ORTHO05D011078 8.2e-23 110.9 79 75.9
PGSC0003DMG400045366 Solanum tuberosum HOM05D007844 ORTHO05D011078 1.1e-22 110.5 79 73.4
PGSC0003DMG400034836 Solanum tuberosum HOM05D007844 ORTHO05D011078 1.8e-22 109.8 79 75.9
PGSC0003DMG400042858 Solanum tuberosum HOM05D007844 ORTHO05D011078 4.0e-22 108.6 79 74.7
PGSC0003DMG400035143 Solanum tuberosum HOM05D007844 ORTHO05D011078 1.2e-21 107.1 79 72.2
PGSC0003DMG400020970 Solanum tuberosum HOM05D007844 ORTHO05D011078 4.5e-21 105.1 79 73.4
PGSC0003DMG400046669 Solanum tuberosum HOM05D007844 ORTHO05D011078 7.6e-21 104.4 79 70.9
PGSC0003DMG400007712 Solanum tuberosum HOM05D007844 ORTHO05D011832 3.8e-20 102.1 78 71.8
PGSC0003DMG400021031 Solanum tuberosum HOM05D007844 ORTHO05D011078 1.3e-17 93.6 70 72.9
PGSC0003DMG400043711 Solanum tuberosum HOM05D007844 ORTHO05D011078 1.8e-17 93.2 81 66.7
PGSC0003DMG400045745 Solanum tuberosum HOM05D007844 ORTHO05D011832 1.1e-16 90.5 74 64.9
PGSC0003DMG400001198 Solanum tuberosum HOM05D007844 ORTHO05D011078 1.5e-16 90.1 96 58.3
Sopen05g014490 Solanum pennellii HOM05D007844 ORTHO05D011078 1.9e-16 89.7 79 59.5
PGSC0003DMG400038664 Solanum tuberosum HOM05D007844 ORTHO05D011078 1.9e-16 89.7 93 60.2
PGSC0003DMG400025466 Solanum tuberosum HOM05D007844 ORTHO05D011078 6.3e-15 84.7 67 70.1
PGSC0003DMG400036013 Solanum tuberosum HOM05D007844 ORTHO05D011832 1.8e-14 83.2 81 64.2
Sopen01g027650 Solanum pennellii HOM05D007844 ORTHO05D011078 3.1e-14 82.4 83 57.8
PGSC0003DMG400037476 Solanum tuberosum HOM05D007844 ORTHO05D011078 9.0e-14 80.9 81 59.3
Sopen06g007340 Solanum pennellii HOM05D000107 ORTHO05D000034 1.5e-13 80.1 51 68.6
PGSC0003DMG400013853 Solanum tuberosum HOM05D007844 ORTHO05D011078 2.0e-13 79.7 81 58.0
PGSC0003DMG400043113 Solanum tuberosum HOM05D007844 ORTHO05D011078 2.0e-13 79.7 82 56.1
PGSC0003DMG400035482 Solanum tuberosum HOM05D007844 ORTHO05D011078 1.0e-12 77.4 68 63.2
TWI53G0600 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 1.3e-12 77.0 93 46.2
TWI56G1165 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 1.3e-12 77.0 51 66.7
TWI73G0119 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 1.7e-12 76.6 51 66.7
Ca_20043_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 3.8e-12 75.5 56 55.4
PGSC0003DMG400040193 Solanum tuberosum HOM05D007844 ORTHO05D011078 5.0e-12 75.1 55 72.7
TWI81G0480 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 6.5e-12 74.7 47 68.1
PGSC0003DMG400029981 Solanum tuberosum HOM05D007844 ORTHO05D011078 8.5e-12 74.3 52 71.2
TPR.G40433 Trifolium pratense HOM05D000107 ORTHO05D000062 1.4e-11 73.6 56 57.1
TWI32G1089 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 1.4e-11 73.6 93 41.9
TWI38G0895 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 1.4e-11 73.6 93 41.9
PGSC0003DMG400023824 Solanum tuberosum HOM05D007844 ORTHO05D017132 2.5e-11 72.8 118 42.4
Ca_21510_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 3.2e-11 72.4 56 53.6
TPR.G16983 Trifolium pratense HOM05D000107 ORTHO05D000062 4.2e-11 72.0 56 53.6
PGSC0003DMG400043619 Solanum tuberosum HOM05D007844 ORTHO05D011078 5.5e-11 71.6 73 58.9
TPR.G36007 Trifolium pratense HOM05D000107 ORTHO05D000062 5.5e-11 71.6 56 53.6
TWI81G0835 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 5.5e-11 71.6 48 68.8
Ca_26934_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000110 1.2e-10 70.5 56 53.6
PGSC0003DMG400045159 Solanum tuberosum HOM05D007844 ORTHO05D011078 1.6e-10 70.1 52 67.3
PGSC0003DMG400045558 Solanum tuberosum HOM05D007844 ORTHO05D011078 2.1e-10 69.7 55 69.1
Ca_20640_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 2.7e-10 69.3 56 53.6
VMungo0251G2550 Vigna mungo HOM05D000107 ORTHO05D000001 7.9e-10 67.8 51 60.8
TPR.G9236 Trifolium pratense HOM05D000107 ORTHO05D000062 1.8e-09 66.6 57 50.9
TPR.G28493 Trifolium pratense HOM05D000107 ORTHO05D000062 2.3e-09 66.2 51 52.9
PGSC0003DMG400042149 Solanum tuberosum HOM05D007844 ORTHO05D011078 5.1e-09 65.1 46 78.3
TWI18G0474 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 5.1e-09 65.1 44 65.9
ECA234G0534 Erigeron canadensis HOM05D000107 ORTHO05D000062 8.8e-09 64.3 55 54.5
SHI23323 Sapria himalayana HOM05D000107 ORTHO05D000062 8.8e-09 64.3 51 56.9
SHI36043 Sapria himalayana HOM05D007985 ORTHO05D000062 1.1e-08 63.9 60 53.3
PGSC0003DMG400035968 Solanum tuberosum HOM05D007844 ORTHO05D011078 1.1e-08 63.9 48 75.0
TPR.G14757 Trifolium pratense HOM05D000107 ORTHO05D000062 2.0e-08 63.2 51 52.9
TPR.G21222 Trifolium pratense HOM05D000107 ORTHO05D000062 2.0e-08 63.2 51 51.0
SHI42354 Sapria himalayana HOM05D000107 ORTHO05D000062 4.3e-08 62.0 51 52.9
Ca_11643_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 5.7e-08 61.6 50 52.0
PGSC0003DMG400039602 Solanum tuberosum HOM05D007844 ORTHO05D011078 7.4e-08 61.2 48 70.8
Ca_02618_v3 Cicer arietinum L. HOM05D008273 ORTHO05D000110 9.7e-08 60.8 44 56.8
Ca_19967_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 1.3e-07 60.5 50 50.0
TPR.G7421 Trifolium pratense HOM05D000107 ORTHO05D000062 2.2e-07 59.7 51 49.0
Ca_07081_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 2.8e-07 59.3 50 50.0
SHI31941 Sapria himalayana HOM05D000107 ORTHO05D000062 2.8e-07 59.3 53 49.1
PGSC0003DMG400014002 Solanum tuberosum HOM05D000003 ORTHO05D001389 2.8e-07 59.3 48 70.8
TPR.G14753 Trifolium pratense HOM05D000107 ORTHO05D000062 3.7e-07 58.9 51 49.0
TPR.G7528 Trifolium pratense HOM05D000107 ORTHO05D000062 3.7e-07 58.9 69 46.4
Ca_23066_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 4.8e-07 58.5 55 47.3
SHI47468 Sapria himalayana HOM05D000107 ORTHO05D000062 8.2e-07 57.8 51 51.0
SHI49792 Sapria himalayana HOM05D000107 ORTHO05D000062 8.2e-07 57.8 42 57.1
SHI52728 Sapria himalayana HOM05D000107 ORTHO05D000062 8.2e-07 57.8 42 57.1
SHI53250 Sapria himalayana HOM05D000107 ORTHO05D000062 8.2e-07 57.8 42 57.1
PGSC0003DMG400013059 Solanum tuberosum HOM05D000107 ORTHO05D000062 8.2e-07 57.8 42 59.5
TPR.G33094 Trifolium pratense HOM05D000107 ORTHO05D000062 1.1e-06 57.4 47 51.1
Aa31sc106G50 Aethionema arabicum HOM05D000107 ORTHO05D000062 1.8e-06 56.6 45 57.8
Aa31sc20G110 Aethionema arabicum HOM05D001086 ORTHO05D001112 2.4e-06 56.2 42 59.5
Aa31sc99G60 Aethionema arabicum HOM05D000107 ORTHO05D000062 2.4e-06 56.2 51 52.9
CAN.G1048.1 Capsicum annuum HOM05D000107 ORTHO05D000062 3.1e-06 55.8 51 49.0
PSO675G6961 Papaver somniferum HOM05D000107 ORTHO05D000062 4.1e-06 55.5 70 35.7
TWI73G0987 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 4.1e-06 55.5 79 38.0
PGSC0003DMG400011857 Solanum tuberosum HOM05D000107 ORTHO05D000062 5.3e-06 55.1 27 88.9
TPR.G24690 Trifolium pratense HOM05D000107 ORTHO05D000062 5.3e-06 55.1 54 48.1
ECA234G3052 Erigeron canadensis HOM05D000107 ORTHO05D000062 6.9e-06 54.7 76 42.1
THA.LOC104815196 Tarenaya hassleriana HOM05D000107 ORTHO05D000062 6.9e-06 54.7 42 57.1
THA.LOC109116289 Tarenaya hassleriana HOM05D000107 ORTHO05D000062 6.9e-06 54.7 47 53.2
THA.LOC109116556 Tarenaya hassleriana HOM05D000107 ORTHO05D000062 6.9e-06 54.7 47 53.2
PSO478G1847 Papaver somniferum HOM05D000107 ORTHO05D000062 9.1e-06 54.3 57 43.9


User provided reference genes

Program Settings