Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen06g004450 Solanum pennellii HOM05D002986 ORTHO05D013699 1.4e-85 320.9 392 100.0
Sopen01g039970 Solanum pennellii HOM05D002986 ORTHO05D009442 9.6e-18 95.5 107 97.2
CSS0003779 Camellia sinensis var. sinensis HOM05D002986 ORTHO05D003966 2.4e-13 80.9 44 84.1
DCAR_022794 Daucus carota HOM05D002986 ORTHO05D003966 2.4e-13 80.9 44 88.6
Dinv32619 Davidia involucrata HOM05D002986 ORTHO05D007611 2.1e-12 77.8 42 85.7
SalBow5G2864 Salvia bowleyana HOM05D001628 ORTHO05D001568 4.6e-12 76.6 44 79.5
ECA236G0037 Erigeron canadensis HOM05D002986 ORTHO05D003966 6.0e-12 76.3 44 81.8
Ah.05g169180 Amaranthus hybridus HOM05D002986 ORTHO05D007611 7.9e-12 75.9 232 66.4
DCAR_006392 Daucus carota HOM05D002986 ORTHO05D003966 7.9e-12 75.9 41 90.2
Lsat_1_v5_gn_7_4680 Lactuca sativa HOM05D002986 ORTHO05D003966 7.9e-12 75.9 44 81.8
SalBow4G2308 Salvia bowleyana HOM05D002986 ORTHO05D003966 3.9e-11 73.6 44 77.3
AUR62024804 Chenopodium quinoa HOM05D002986 ORTHO05D003966 5.1e-11 73.2 44 75.0
AUR62032416 Chenopodium quinoa HOM05D002986 ORTHO05D013699 5.1e-11 73.2 44 75.0
Eucgr.E00027 Eucalyptus grandis HOM05D002986 ORTHO05D003966 1.1e-10 72.0 41 82.9
HanXRQChr04g0120401 Helianthus annuus HOM05D002986 ORTHO05D003966 1.1e-10 72.0 41 85.4
MD02G1232100 Malus domestica HOM05D002986 ORTHO05D003966 1.5e-10 71.6 44 75.0
FvH4_7g08341 Fragaria vesca HOM05D002986 ORTHO05D003966 1.9e-10 71.2 44 72.7
Ciclev10024306m.g Citrus clementina HOM05D002986 ORTHO05D003966 2.5e-10 70.9 43 76.7
HanXRQChr04g0120331 Helianthus annuus HOM05D002986 ORTHO05D003966 2.5e-10 70.9 40 85.0
Manes.05G019600 Manihot esculenta HOM05D002986 ORTHO05D003966 3.3e-10 70.5 43 74.4
Aqoxy3G02934 Aquilegia oxysepala HOM05D002986 ORTHO05D003966 7.4e-10 69.3 42 76.2
MBI04_g11919_MAGBIO Magnolia biondii HOM05D002986 ORTHO05D003966 9.6e-10 68.9 42 76.2
CiPaw.01G079100 Carya illinoinensis HOM05D002986 ORTHO05D003966 1.3e-09 68.6 42 76.2
MBI04_g06922_MAGBIO Magnolia biondii HOM05D013799 ORTHO05D013699 1.6e-09 68.2 41 78.0
Lalb_Chr19g0125351 Lupinus albus HOM05D002986 ORTHO05D003966 2.1e-09 67.8 44 72.7
SHI13050 Sapria himalayana HOM05D002986 ORTHO05D003966 2.1e-09 67.8 43 72.1
GSVIVG01031218001 Vitis vinifera HOM05D002986 ORTHO05D007611 3.7e-09 67.0 42 76.2
Hma1.2p1_0180F.1_g079710 Hydrangea macrophylla HOM05D002986 ORTHO05D003966 4.8e-09 66.6 48 62.5
EL10Ac1g01397 Beta vulgaris HOM05D002986 ORTHO05D003966 6.2e-09 66.2 40 75.0
arahy.Tifrunner.gnm1.ann1.Z51W7G Arachis hypogaea HOM05D002986 ORTHO05D013699 8.1e-09 65.9 44 70.5
Prupe.2G106500 Prunus persica HOM05D002986 ORTHO05D003966 8.1e-09 65.9 44 68.2
Peaxi162Scf00767g00016 Petunia axillaris HOM05D000716 ORTHO05D004822 1.8e-08 64.7 37 78.4
MD07G1081300 Malus domestica HOM05D002986 ORTHO05D018174 2.4e-08 64.3 69 50.7
arahy.Tifrunner.gnm1.ann1.T6B6L0 Arachis hypogaea HOM05D002986 ORTHO05D003966 3.1e-08 63.9 44 68.2
arahy.Tifrunner.gnm1.ann1.N9VQ32 Arachis hypogaea HOM05D002986 ORTHO05D003966 9.0e-08 62.4 44 65.9
RcHm_v2.0_Chr1g0340621 Rosa chinensis HOM05D014088 ORTHO05D013699 9.0e-08 62.4 43 67.4
arahy.Tifrunner.gnm1.ann1.A8R8TX Arachis hypogaea HOM05D002986 ORTHO05D003966 1.2e-07 62.0 44 65.9
ECA236G1421 Erigeron canadensis HOM05D002986 ORTHO05D003966 3.4e-07 60.5 46 63.0
Psat3g140560 Pisum sativum HOM05D002986 ORTHO05D003966 4.5e-07 60.1 43 62.8
CSS0011148 Camellia sinensis var. sinensis HOM05D002986 ORTHO05D003966 9.9e-07 58.9 45 57.8
Ca_26027_v3 Cicer arietinum L. HOM05D002986 ORTHO05D003966 1.7e-06 58.2 43 62.8
CsaV3_3G027230 Cucumis sativus L. HOM05D002986 ORTHO05D003966 2.9e-06 57.4 40 65.0
Sed0020837 Sechium edule HOM05D002986 ORTHO05D007611 2.9e-06 57.4 39 69.2
Glyma.07G131700 Glycine max HOM05D002986 ORTHO05D003966 3.8e-06 57.0 41 61.0
ClCG05G013300 Citrullus lanatus HOM05D002986 ORTHO05D003966 6.4e-06 56.2 40 65.0
MELO3C014863.2 Cucumis melo HOM05D002986 ORTHO05D003966 6.4e-06 56.2 41 63.4


User provided reference genes

Program Settings