Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen06g004170 Solanum pennellii HOM05D006547 ORTHO05D008112 8.0e-58 226.9 114 100.0
Solyc06g009510.1 Solanum lycopersicum HOM05D006547 ORTHO05D008112 5.4e-54 214.2 114 95.6
PGSC0003DMG401007298 Solanum tuberosum HOM05D006547 ORTHO05D008112 3.0e-52 208.4 115 90.4
CAN.G1280.37 Capsicum annuum HOM05D006547 ORTHO05D008112 1.3e-36 156.4 119 72.3
Nitab4.5_0000363g0200 Nicotiana tabacum HOM05D006547 ORTHO05D008112 1.6e-21 106.3 103 63.1
Thecc.02G266700 Theobroma cacao HOM05D006547 ORTHO05D008112 1.4e-17 93.2 92 53.3
Peaxi162Scf00058g00236 Petunia axillaris HOM05D006547 ORTHO05D008112 3.1e-17 92.0 61 73.8
PGSC0003DMG400009058 Solanum tuberosum HOM05D006547 ORTHO05D008112 1.5e-16 89.7 123 49.6
Ciclev10022819m.g Citrus clementina HOM05D006547 ORTHO05D008112 1.7e-15 86.3 99 56.6
CAN.G293.16 Capsicum annuum HOM05D006547 ORTHO05D008112 2.2e-15 85.9 88 55.7
Sopen01g031050 Solanum pennellii HOM05D006547 ORTHO05D008112 1.4e-14 83.2 123 47.2
Duzib248G0337 Durio zibethinus HOM05D006547 ORTHO05D008112 1.9e-14 82.8 94 50.0
TAR362G1145 Trochodendron aralioides HOM05D006547 ORTHO05D008112 1.9e-14 82.8 92 52.2
Oeu038038.1 Olea europaea HOM05D006547 ORTHO05D008112 3.2e-14 82.0 93 51.6
DCAR_002885 Daucus carota HOM05D006547 ORTHO05D008112 5.4e-14 81.3 99 48.5
Solyc01g079270.1 Solanum lycopersicum HOM05D006547 ORTHO05D008112 5.4e-14 81.3 123 47.2
Duzib251G0664 Durio zibethinus HOM05D006547 ORTHO05D008112 2.7e-13 79.0 74 59.5
Nitab4.5_0007407g0060 Nicotiana tabacum HOM05D006547 ORTHO05D008112 2.7e-13 79.0 64 65.6
Oeu008480.1 Olea europaea HOM05D006547 ORTHO05D008112 3.5e-13 78.6 101 49.5
Cpa.g.sc18.81 Carica papaya HOM05D006547 ORTHO05D008112 6.0e-13 77.8 102 49.0
Migut.D00065 Erythranthe guttata HOM05D006547 ORTHO05D008112 6.0e-13 77.8 72 61.1
Duzib268G0572 Durio zibethinus HOM05D006547 ORTHO05D008112 7.9e-13 77.4 94 48.9
Atru.chr5.966 Acer truncatum HOM05D006547 ORTHO05D008112 1.8e-12 76.3 96 46.9
Hma1.2p1_0486F.1_g163490 Hydrangea macrophylla HOM05D006547 ORTHO05D008112 1.8e-12 76.3 89 51.7
Gohir.A12G145800 Gossypium hirsutum HOM05D006547 ORTHO05D008112 2.3e-12 75.9 91 51.6
Gohir.D12G150400 Gossypium hirsutum HOM05D006547 ORTHO05D008112 3.0e-12 75.5 91 51.6
Gorai.008G161900 Gossypium raimondii HOM05D006547 ORTHO05D008112 3.0e-12 75.5 91 51.6
Oeu044737.1 Olea europaea HOM05D006547 ORTHO05D008112 3.0e-12 75.5 77 51.9
TAR365G0268 Trochodendron aralioides HOM05D006547 ORTHO05D008112 3.0e-12 75.5 95 51.6
Potri.002G193300 Populus trichocarpa HOM05D006547 ORTHO05D008112 3.9e-12 75.1 110 46.4
SGA_v2.0_scaffold334G49085 Striga asiatica HOM05D006547 ORTHO05D008112 5.1e-12 74.7 103 45.6
Lalb_Chr03g0036161 Lupinus albus HOM05D006547 ORTHO05D008112 6.7e-12 74.3 105 39.0
Potri.014G118300 Populus trichocarpa HOM05D006547 ORTHO05D008112 6.7e-12 74.3 79 55.7
Phvul.007G089100 Phaseolus vulgaris HOM05D006547 ORTHO05D008112 8.7e-12 73.9 121 41.3
COL.COLO4_23526 Corchorus olitorius HOM05D006547 ORTHO05D008112 1.5e-11 73.2 83 54.2
CSS0011798 Camellia sinensis var. sinensis HOM05D006547 ORTHO05D008112 1.9e-11 72.8 86 47.7
DCAR_005744 Daucus carota HOM05D006547 ORTHO05D008112 3.3e-11 72.0 96 51.0
Sabra02G0162800 Salix brachista HOM05D006547 ORTHO05D008112 3.3e-11 72.0 76 55.3
AT2G47270 Arabidopsis thaliana HOM05D006547 ORTHO05D008112 9.6e-11 70.5 73 50.7
CiPaw.07G119400 Carya illinoinensis HOM05D006547 ORTHO05D008112 9.6e-11 70.5 97 41.2
Hma1.2p1_0408F.1_g146550 Hydrangea macrophylla HOM05D006547 ORTHO05D008112 9.6e-11 70.5 77 51.9
EL10As5g23562 Beta vulgaris HOM05D006547 ORTHO05D008112 1.3e-10 70.1 74 50.0
CiPaw.08G087700 Carya illinoinensis HOM05D006547 ORTHO05D008112 1.3e-10 70.1 97 46.4
QL12p019056 Quercus lobata HOM05D006547 ORTHO05D008112 1.3e-10 70.1 93 48.4
Sabra14G0087800 Salix brachista HOM05D006547 ORTHO05D008112 1.3e-10 70.1 77 54.5
Gohir.D01G152800 Gossypium hirsutum HOM05D006547 ORTHO05D008112 2.8e-10 68.9 105 44.8
Lalb_Chr02g0141791 Lupinus albus HOM05D006547 ORTHO05D008112 3.6e-10 68.6 78 51.3
TAR633G2779 Trochodendron aralioides HOM05D006547 ORTHO05D008112 3.6e-10 68.6 95 47.4
vmacro02389 Vaccinium macrocarpon HOM05D006547 ORTHO05D008112 3.6e-10 68.6 82 47.6
AL302U10010 Arabidopsis lyrata HOM05D006547 ORTHO05D008112 4.8e-10 68.2 73 47.9
AL4G46840 Arabidopsis lyrata HOM05D006547 ORTHO05D008112 4.8e-10 68.2 73 47.9
C04p00620 Brassica napus HOM05D006547 ORTHO05D008112 4.8e-10 68.2 73 46.6
Manes.01G229900 Manihot esculenta HOM05D006547 ORTHO05D008112 4.8e-10 68.2 92 48.9
BolC4t21695H Brassica oleracea HOM05D006547 ORTHO05D008112 6.2e-10 67.8 73 45.2
TPR.G8830 Trifolium pratense HOM05D006547 ORTHO05D008112 8.1e-10 67.4 79 46.8
DCAR_018278 Daucus carota HOM05D006547 ORTHO05D008112 1.1e-09 67.0 84 48.8
VMungo0720G0102 Vigna mungo HOM05D006547 ORTHO05D008112 1.1e-09 67.0 111 39.6
Gohir.A01G157750 Gossypium hirsutum HOM05D006547 ORTHO05D008112 1.4e-09 66.6 78 51.3
Gorai.002G189200 Gossypium raimondii HOM05D006547 ORTHO05D008112 1.4e-09 66.6 105 43.8
Nitab4.5_0000222g0070 Nicotiana tabacum HOM05D006547 ORTHO05D008112 1.4e-09 66.6 60 61.7
A05p00570 Brassica napus HOM05D006547 ORTHO05D008112 1.8e-09 66.2 73 45.2
Carub.0004s3001 Capsella rubella HOM05D006547 ORTHO05D008112 1.8e-09 66.2 73 46.6
SalBow3G4324 Salvia bowleyana HOM05D006547 ORTHO05D008112 2.4e-09 65.9 78 46.2
CARHR142670 Cardamine hirsuta HOM05D006547 ORTHO05D008112 3.1e-09 65.5 73 46.6
Haze_05072 Corylus avellana HOM05D006547 ORTHO05D008112 3.1e-09 65.5 79 46.8
Manes.05G013600 Manihot esculenta HOM05D006547 ORTHO05D008112 4.0e-09 65.1 93 47.3
MSTRG.21702 Avicennia marina HOM05D006547 ORTHO05D008112 5.3e-09 64.7 76 46.1
BcaB02g08786 Brassica carinata HOM05D006547 ORTHO05D008112 5.3e-09 64.7 70 47.1
BraA05t19055Z Brassica rapa HOM05D006547 ORTHO05D008112 5.3e-09 64.7 73 43.8
Dinv15146 Davidia involucrata HOM05D004325 ORTHO05D005470 5.3e-09 64.7 100 42.0
Cfa005764 Carpinus fangiana HOM05D006547 ORTHO05D008112 6.9e-09 64.3 92 43.5
DCAR_012331 Daucus carota HOM05D006547 ORTHO05D008112 9.0e-09 63.9 71 52.1
Thhalv10001736m.g Eutrema salsugineum HOM05D006547 ORTHO05D008112 9.0e-09 63.9 73 45.2
Lj5g0010023 Lotus japonicus HOM05D006547 ORTHO05D008112 9.0e-09 63.9 73 47.9
SGA_v2.0_scaffold376G50290 Striga asiatica HOM05D006547 ORTHO05D008112 9.0e-09 63.9 87 47.1
ATR0693G012 Amborella trichopoda HOM05D006547 ORTHO05D008112 1.2e-08 63.5 69 47.8
Ca_10619_v3 Cicer arietinum L. HOM05D006547 ORTHO05D008112 1.2e-08 63.5 106 37.7
Sp4g29240 Schrenkiella parvula HOM05D006547 ORTHO05D008112 1.5e-08 63.2 96 38.5
CANSAT25G1528 Cannabis sativa HOM05D006547 ORTHO05D008112 2.6e-08 62.4 47 61.7
arahy.Tifrunner.gnm1.ann1.BQK7VT Arachis hypogaea HOM05D006547 ORTHO05D008112 3.4e-08 62.0 78 46.2
BcaC01g05038 Brassica carinata HOM05D006547 ORTHO05D008112 3.4e-08 62.0 73 42.5
C03p30880 Brassica napus HOM05D006547 ORTHO05D008112 3.4e-08 62.0 73 42.5
BolC3t15440H Brassica oleracea HOM05D006547 ORTHO05D008112 3.4e-08 62.0 73 42.5
HanXRQChr15g0465071 Helianthus annuus HOM05D006547 ORTHO05D008112 3.4e-08 62.0 101 44.6
PSO761G0312 Papaver somniferum HOM05D006547 ORTHO05D008112 3.4e-08 62.0 49 59.2
Glyma.20G175000 Glycine max HOM05D006547 ORTHO05D008112 4.5e-08 61.6 94 41.5
Rhsim13G0003400 Rhododendron simsii HOM05D006547 ORTHO05D008112 4.5e-08 61.6 76 46.1
Gohir.A04G137350 Gossypium hirsutum HOM05D034510 ORTHO05D008112 5.8e-08 61.2 85 38.8
Aa31LG1G28590 Aethionema arabicum HOM05D006547 ORTHO05D008112 7.6e-08 60.8 99 39.4
BcaB01g03174 Brassica carinata HOM05D006547 ORTHO05D008112 7.6e-08 60.8 73 42.5
Medtr1g096530 Medicago truncatula HOM05D006547 ORTHO05D008112 7.6e-08 60.8 71 47.9
PSO210G6541 Papaver somniferum HOM05D006547 ORTHO05D008112 9.9e-08 60.5 47 59.6
MBI18_g22340_MAGBIO Magnolia biondii HOM05D006547 ORTHO05D008112 1.3e-07 60.1 71 46.5
THA.LOC104817451 Tarenaya hassleriana HOM05D006547 ORTHO05D008112 1.3e-07 60.1 53 58.5
TWI36G0249 Tripterygium wilfordii HOM05D006547 ORTHO05D008112 1.3e-07 60.1 85 44.7
Nn3g21744 Nelumbo nucifera HOM05D006547 ORTHO05D008112 2.9e-07 58.9 55 54.5
Prupe.3G008700 Prunus persica HOM05D006547 ORTHO05D008112 2.9e-07 58.9 114 35.1
MBI19_g03260_MAGBIO Magnolia biondii HOM05D001624 ORTHO05D001530 3.8e-07 58.5 90 41.1
Glyma.10G217100 Glycine max HOM05D006547 ORTHO05D008112 4.9e-07 58.2 79 43.0
MD09G1285300 Malus domestica HOM05D006547 ORTHO05D008112 6.4e-07 57.8 63 46.0
Gohir.D04G180550 Gossypium hirsutum HOM05D034510 ORTHO05D047560 8.4e-07 57.4 85 37.6
Gorai.012G173700 Gossypium raimondii HOM05D034510 ORTHO05D047560 8.4e-07 57.4 85 37.6
TWI18G0834 Tripterygium wilfordii HOM05D006547 ORTHO05D008112 8.4e-07 57.4 100 41.0
Ciclev10006764m.g Citrus clementina HOM05D006547 ORTHO05D008112 1.4e-06 56.6 70 42.9
A04p34890 Brassica napus HOM05D006547 ORTHO05D008112 3.2e-06 55.5 74 39.2
BraSC79t46680Z Brassica rapa HOM05D006547 ORTHO05D008112 3.2e-06 55.5 74 39.2
CsaV3_3G026610 Cucumis sativus L. HOM05D006547 ORTHO05D008112 5.5e-06 54.7 77 40.3
HanXRQChr10g0285031 Helianthus annuus HOM05D006547 ORTHO05D008112 7.1e-06 54.3 50 52.0
ECA247G3592 Erigeron canadensis HOM05D006547 ORTHO05D008112 9.3e-06 53.9 112 34.8
FAN26G3307 Fragaria x ananassa HOM05D006547 ORTHO05D008112 9.3e-06 53.9 75 42.7


User provided reference genes

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