Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen06g004090 Solanum pennellii HOM05D007572 ORTHO05D009535 9.3e-77 290.0 138 100.0
Solyc06g009340.4 Solanum lycopersicum HOM05D007572 ORTHO05D009535 3.9e-75 284.6 138 97.8
CAN.G1280.44 Capsicum annuum HOM05D007572 ORTHO05D009535 5.1e-67 257.7 138 89.1
Nitab4.5_0003324g0080 Nicotiana tabacum HOM05D007572 ORTHO05D009535 3.0e-59 231.9 145 77.9
Nitab4.5_0000363g0140 Nicotiana tabacum HOM05D007572 ORTHO05D009535 3.6e-52 208.4 117 84.6
PGSC0003DMG400007276 Solanum tuberosum HOM05D007572 ORTHO05D009535 1.1e-50 203.4 117 87.2
CiPaw.08G083700 Carya illinoinensis HOM05D007572 ORTHO05D009535 5.9e-47 191.0 135 70.4
TWI23G0551 Tripterygium wilfordii HOM05D007572 ORTHO05D009535 1.7e-46 189.5 138 68.1
arahy.Tifrunner.gnm1.ann1.W6UB1T Arachis hypogaea HOM05D007572 ORTHO05D009535 6.5e-46 187.6 135 66.7
PGR142G3328 Punica granatum HOM05D007572 ORTHO05D009535 8.5e-46 187.2 135 67.4
Medtr7g110410 Medicago truncatula HOM05D007572 ORTHO05D009535 1.1e-45 186.8 135 65.2
Gohir.A07G131300 Gossypium hirsutum HOM05D007572 ORTHO05D009535 5.5e-45 184.5 135 65.9
arahy.Tifrunner.gnm1.ann1.XSK3JW Arachis hypogaea HOM05D007572 ORTHO05D009535 7.2e-45 184.1 135 65.2
CsaV3_5G029750 Cucumis sativus L. HOM05D007572 ORTHO05D009535 9.4e-45 183.7 135 65.9
Dinv12090 Davidia involucrata HOM05D007572 ORTHO05D009535 1.2e-44 183.3 135 68.9
Potri.002G188300 Populus trichocarpa HOM05D007572 ORTHO05D009535 2.7e-44 182.2 135 66.7
MELO3C034050.2 Cucumis melo HOM05D007572 ORTHO05D009535 3.6e-44 181.8 135 65.2
TPR.G2442 Trifolium pratense HOM05D007572 ORTHO05D009535 4.7e-44 181.4 135 64.4
Duzib138G0176 Durio zibethinus HOM05D007572 ORTHO05D009535 8.0e-44 180.6 135 65.9
Glyma.03G223300 Glycine max HOM05D007572 ORTHO05D009535 1.0e-43 180.3 136 66.2
Gohir.D07G135600 Gossypium hirsutum HOM05D007572 ORTHO05D009535 1.0e-43 180.3 135 64.4
Lj1g0010997 Lotus japonicus HOM05D007572 ORTHO05D009535 1.0e-43 180.3 135 64.4
Lalb_Chr04g0260171 Lupinus albus HOM05D007572 ORTHO05D009535 1.0e-43 180.3 135 63.7
Psat3g018080 Pisum sativum HOM05D007572 ORTHO05D009535 1.8e-43 179.5 135 63.7
Sed0017651 Sechium edule HOM05D007572 ORTHO05D009535 5.2e-43 177.9 135 64.4
Lsat_1_v5_gn_8_167180 Lactuca sativa HOM05D007572 ORTHO05D009535 1.2e-42 176.8 138 63.8
Manes.05G010100 Manihot esculenta HOM05D007572 ORTHO05D009535 1.5e-42 176.4 135 65.2
Eucgr.K00578 Eucalyptus grandis HOM05D007572 ORTHO05D009535 7.5e-42 174.1 138 60.1
Phvul.001G217100 Phaseolus vulgaris HOM05D007572 ORTHO05D009535 1.7e-41 172.9 134 64.9
Nn3g21914 Nelumbo nucifera HOM05D007572 ORTHO05D009535 9.1e-40 167.2 135 60.0
HanXRQChr13g0414461 Helianthus annuus HOM05D007572 ORTHO05D009535 2.7e-39 165.6 138 61.6
Peaxi162Scf00058g02018 Petunia axillaris HOM05D007572 ORTHO05D009535 2.7e-39 165.6 116 70.7
Cc01_g21830 Coffea canephora HOM05D007572 ORTHO05D009535 2.2e-38 162.5 135 60.7
Oeu052583.1 Olea europaea HOM05D007572 ORTHO05D009535 4.7e-36 154.8 135 60.0
Hund11629 Selenicereus undatus HOM05D007572 ORTHO05D009535 6.1e-36 154.5 135 61.5
BolC8t51291H Brassica oleracea HOM05D007572 ORTHO05D009535 1.4e-35 153.3 141 59.6
AL5G44940 Arabidopsis lyrata HOM05D007572 ORTHO05D009535 1.8e-35 152.9 140 58.6
C08p37130 Brassica napus HOM05D007572 ORTHO05D009535 1.8e-35 152.9 141 59.6
Thhalv10006305m.g Eutrema salsugineum HOM05D007572 ORTHO05D009535 3.0e-35 152.1 140 59.3
Sp5g01190 Schrenkiella parvula HOM05D007572 ORTHO05D009535 3.0e-35 152.1 140 58.6
AT3G62190 Arabidopsis thaliana HOM05D007572 ORTHO05D009535 4.0e-35 151.8 140 59.3
BraA09t40838Z Brassica rapa HOM05D007572 ORTHO05D009535 4.0e-35 151.8 141 59.6
CDE02G1692 Ceratophyllum demersum HOM05D007572 ORTHO05D009535 6.8e-35 151.0 138 53.6
vmacro16962 Vaccinium macrocarpon HOM05D007572 ORTHO05D009535 6.8e-35 151.0 120 63.3
Carub.0005s2892 Capsella rubella HOM05D007572 ORTHO05D009535 2.6e-34 149.1 140 58.6
Aqoxy2G02521 Aquilegia oxysepala HOM05D007572 ORTHO05D009535 9.8e-34 147.1 133 58.6
ATR0796G039 Amborella trichopoda HOM05D007572 ORTHO05D009535 1.4e-32 143.3 138 55.1
VMungo1383G1880 Vigna mungo HOM05D007572 ORTHO05D009535 2.3e-30 136.0 125 59.2
PSO210G6566 Papaver somniferum HOM05D007572 ORTHO05D009535 6.6e-30 134.4 145 49.0
SalBow6G4072 Salvia bowleyana HOM05D007572 ORTHO05D009535 2.5e-29 132.5 138 53.6
Ah.11g045850 Amaranthus hybridus HOM05D007572 ORTHO05D009535 9.5e-29 130.6 116 57.8
A09p54260 Brassica napus HOM05D007572 ORTHO05D009535 1.0e-27 127.1 135 54.1
Rhsim01G0293200 Rhododendron simsii HOM05D007572 ORTHO05D009535 1.8e-27 126.3 194 42.8
unitig_60.g25647 Utricularia gibba HOM05D007572 ORTHO05D009535 5.2e-27 124.8 144 50.0
Migut.D00021 Erythranthe guttata HOM05D007572 ORTHO05D009535 8.9e-27 124.0 145 48.3
Aa31LG10G16130 Aethionema arabicum HOM05D007572 ORTHO05D009535 3.4e-26 122.1 187 42.2
Zm00001eb110000 Zea mays HOM05D007572 ORTHO05D009535 1.7e-25 119.8 138 49.3
SGA_v2.0_scaffold80G25682 Striga asiatica HOM05D007572 ORTHO05D009535 3.2e-24 115.5 174 40.8
Pp3c17_19540 Physcomitrium patens HOM05D007572 ORTHO05D009535 3.5e-23 112.1 139 46.0
BcaC07g40711 Brassica carinata HOM05D007572 ORTHO05D009535 3.9e-22 108.6 131 48.1
Thecc.01G323700 Theobroma cacao HOM05D000023 ORTHO05D000014 9.5e-21 104.0 69 72.5
Gorai.001G147700 Gossypium raimondii HOM05D007572 ORTHO05D009535 4.7e-20 101.7 61 73.8
Duzib133G1540 Durio zibethinus HOM05D007572 ORTHO05D009535 2.3e-19 99.4 61 73.8
Sabra02G0167000 Salix brachista HOM05D007572 ORTHO05D009535 5.2e-19 98.2 61 72.1
DCAR_002931 Daucus carota HOM05D007572 ORTHO05D009535 6.8e-19 97.8 75 64.0
Cfa004892 Carpinus fangiana HOM05D007572 ORTHO05D009535 1.2e-18 97.1 65 69.2
Haze_05130 Corylus avellana HOM05D007572 ORTHO05D009535 1.2e-18 97.1 61 72.1
QL12p034502 Quercus lobata HOM05D007572 ORTHO05D009535 3.4e-18 95.5 97 54.6
MBI18_g10389_MAGBIO Magnolia biondii HOM05D007572 ORTHO05D009535 2.2e-17 92.8 68 61.8
Sc05g0000110 Simmondsia chinensis HOM05D007572 ORTHO05D009535 2.9e-17 92.4 60 70.0
Thecc.01G323600 Theobroma cacao HOM05D007572 ORTHO05D009535 1.4e-16 90.1 78 59.0
AagrBONN_evm.TU.Sc2ySwM_228.110 Anthoceros agrestis HOM05D007572 ORTHO05D009535 2.4e-16 89.4 138 37.7
AUR62011699 Chenopodium quinoa HOM05D007572 ORTHO05D009535 2.4e-16 89.4 60 68.3
CBR_g88332 Chara braunii HOM05D007572 ORTHO05D009535 3.2e-16 89.0 159 34.0
CANSAT01G2141 Cannabis sativa HOM05D007572 ORTHO05D009535 2.0e-15 86.3 60 66.7
Gorai.001G147500 Gossypium raimondii HOM05D007572 ORTHO05D009535 2.7e-15 85.9 64 65.6
COL.COLO4_23146 Corchorus olitorius HOM05D000023 ORTHO05D000014 4.6e-15 85.1 50 76.0
ECA236G0789 Erigeron canadensis HOM05D004810 ORTHO05D006272 6.0e-15 84.7 66 60.6
GSVIVG01028266001 Vitis vinifera HOM05D007572 ORTHO05D009535 2.3e-14 82.8 61 63.9
Ciclev10023453m.g Citrus clementina HOM05D007572 ORTHO05D009535 3.9e-14 82.0 50 74.0
Ciclev10024492m.g Citrus clementina HOM05D007572 ORTHO05D009535 3.9e-14 82.0 49 79.6
PSO761G0106 Papaver somniferum HOM05D007572 ORTHO05D009535 6.6e-14 81.3 66 59.1
Atru.chr5.887 Acer truncatum HOM05D007572 ORTHO05D009535 1.5e-13 80.1 51 66.7
GSVIVG01028267001 Vitis vinifera HOM05D007572 ORTHO05D009535 4.3e-13 78.6 76 52.6
ClCG11G013240 Citrullus lanatus HOM05D007572 ORTHO05D009535 1.2e-12 77.0 52 65.4
CARHR172530 Cardamine hirsuta HOM05D007572 ORTHO05D009535 1.4e-11 73.6 63 60.3
Sabra02G0166900 Salix brachista HOM05D000023 ORTHO05D000014 1.8e-11 73.2 49 71.4
Atru.chr5.884 Acer truncatum HOM05D007572 ORTHO05D009535 5.2e-11 71.6 66 53.0
TAR636G1955 Trochodendron aralioides HOM05D007572 ORTHO05D009535 1.2e-10 70.5 53 58.5
Glyma.19G220500 Glycine max HOM05D007572 ORTHO05D009535 2.0e-10 69.7 137 35.0
SEGI_13004 Sequoiadendron giganteum HOM05D007572 ORTHO05D009535 2.6e-10 69.3 80 47.5
Gohir.A12G120600 Gossypium hirsutum HOM05D007572 ORTHO05D009535 2.9e-09 65.9 52 59.6
BcaB07g33721 Brassica carinata HOM05D007572 ORTHO05D009535 1.4e-08 63.5 63 55.6
Os07g0637100 Oryza sativa ssp. japonica HOM05D007572 ORTHO05D009535 5.4e-08 61.6 54 53.7
CAN.G151.20 Capsicum annuum HOM05D000329 ORTHO05D000833 2.7e-07 59.3 76 52.6
Atru.chr5.886 Acer truncatum HOM05D007572 ORTHO05D009535 1.7e-06 56.6 63 49.2
Atru.chr5.889 Acer truncatum HOM05D007572 ORTHO05D009535 1.7e-06 56.6 63 49.2


User provided reference genes

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