Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen06g003410 Solanum pennellii HOM05D011159 ORTHO05D009486 1.1e-44 183.0 91 100.0
Solyc06g008650.4 Solanum lycopersicum HOM05D011159 ORTHO05D009486 1.9e-41 172.2 91 93.4
PGSC0003DMG400012845 Solanum tuberosum HOM05D011159 ORTHO05D009486 2.7e-40 168.3 91 90.1
Solyc12g014580.2 Solanum lycopersicum HOM05D011159 ORTHO05D009486 6.7e-39 163.7 91 85.7
Sopen12g007460 Solanum pennellii HOM05D011159 ORTHO05D009486 8.7e-39 163.3 91 84.6
PGSC0003DMG400005343 Solanum tuberosum HOM05D011159 ORTHO05D009486 1.9e-33 145.6 91 80.2
CAN.G1492.13 Capsicum annuum HOM05D011159 ORTHO05D009486 4.9e-26 120.9 87 65.5
PGSC0003DMG400005340 Solanum tuberosum HOM05D011159 ORTHO05D009486 6.5e-26 120.6 89 65.2
CAN.G1492.17 Capsicum annuum HOM05D011159 ORTHO05D009486 3.2e-25 118.2 91 61.5
Nitab4.5_0002636g0060 Nicotiana tabacum HOM05D011159 ORTHO05D009486 1.8e-23 112.5 90 60.0
PGSC0003DMG400005342 Solanum tuberosum HOM05D011159 ORTHO05D009486 9.7e-22 106.7 91 59.3
Peaxi162Scf00572g00215 Petunia axillaris HOM05D011159 ORTHO05D009486 2.6e-19 98.6 91 54.9
Solyc06g008625.1 Solanum lycopersicum HOM05D011159 ORTHO05D009486 3.4e-19 98.2 88 58.0
Solyc06g008640.2 Solanum lycopersicum HOM05D011159 ORTHO05D009486 5.9e-19 97.4 91 53.8
Sopen06g003400 Solanum pennellii HOM05D011159 ORTHO05D009486 3.8e-18 94.7 64 62.5
Sopen06g003430 Solanum pennellii HOM05D017103 ORTHO05D009486 3.1e-12 75.1 90 38.9
PGSC0003DMG400005345 Solanum tuberosum HOM05D017103 ORTHO05D009486 5.3e-12 74.3 84 45.2
Nitab4.5_0000252g0080 Nicotiana tabacum HOM05D008542 ORTHO05D009486 1.5e-11 72.8 91 46.2
Nitab4.5_0001729g0040 Nicotiana tabacum HOM05D008542 ORTHO05D009486 1.5e-11 72.8 89 47.2
PGSC0003DMG400005344 Solanum tuberosum HOM05D017103 ORTHO05D009486 1.5e-11 72.8 94 44.7
Sopen06g003450 Solanum pennellii HOM05D017103 ORTHO05D009486 5.9e-11 70.9 94 42.6
Solyc06g008680.3 Solanum lycopersicum HOM05D017103 ORTHO05D009486 1.0e-10 70.1 94 42.6
CAN.G1492.15 Capsicum annuum HOM05D011159 ORTHO05D115300 6.5e-10 67.4 82 43.9
CAN.G1492.16 Capsicum annuum HOM05D011159 ORTHO05D115582 6.5e-10 67.4 82 43.9
MELO3C022293.2 Cucumis melo HOM05D011255 ORTHO05D009486 1.9e-09 65.9 82 37.8
Peaxi162Scf00230g00137 Petunia axillaris HOM05D008542 ORTHO05D009486 3.2e-09 65.1 91 41.8
Nitab4.5_0008064g0010 Nicotiana tabacum HOM05D008542 ORTHO05D009486 4.2e-09 64.7 89 40.4
Sopen06g003440 Solanum pennellii HOM05D017103 ORTHO05D009486 4.2e-09 64.7 93 35.5
CsaV3_6G008480 Cucumis sativus L. HOM05D011255 ORTHO05D009486 5.5e-09 64.3 82 37.8
Solyc06g008667.1 Solanum lycopersicum HOM05D017103 ORTHO05D009486 5.5e-09 64.3 93 36.6
Dinv32906 Davidia involucrata HOM05D008542 ORTHO05D009486 9.4e-09 63.5 89 42.7
Aqoxy2G03426 Aquilegia oxysepala HOM05D008542 ORTHO05D009486 4.7e-08 61.2 72 40.3
Hma1.2p1_0667F.1_g199740 Hydrangea macrophylla HOM05D008542 ORTHO05D009486 4.7e-08 61.2 82 42.7
Cpa.g.sc52.57 Carica papaya HOM05D008542 ORTHO05D009486 1.4e-07 59.7 82 37.8
Oeu029462.1 Olea europaea HOM05D008542 ORTHO05D009486 1.8e-07 59.3 79 36.7
Peaxi162Scf00783g00135 Petunia axillaris HOM05D008542 ORTHO05D009486 1.8e-07 59.3 88 35.2
TWI18G0041 Tripterygium wilfordii HOM05D008542 ORTHO05D009486 1.8e-07 59.3 83 37.3
Eucgr.H01456 Eucalyptus grandis HOM05D008542 ORTHO05D009486 3.9e-07 58.2 82 40.2
Actinidia21129 Actinidia chinensis HOM05D008542 ORTHO05D009486 5.1e-07 57.8 85 38.8
Actinidia24911 Actinidia chinensis HOM05D008542 ORTHO05D009486 5.1e-07 57.8 85 42.4
CAN.G1549.25 Capsicum annuum HOM05D008542 ORTHO05D009486 6.7e-07 57.4 73 41.1
TWI75G0224 Tripterygium wilfordii HOM05D008542 ORTHO05D009486 6.7e-07 57.4 83 36.1
Actinidia09119 Actinidia chinensis HOM05D008542 ORTHO05D009486 1.1e-06 56.6 87 37.9
Lj2A1168T24 Lonicera japonica HOM05D008542 ORTHO05D009486 2.6e-06 55.5 85 35.3
Potri.002G050150 Populus trichocarpa HOM05D008542 ORTHO05D009486 2.6e-06 55.5 87 37.9
MELO3C035236.2 Cucumis melo HOM05D011255 ORTHO05D009486 3.3e-06 55.1 82 34.1
Sabra05G0162200 Salix brachista HOM05D008542 ORTHO05D009486 3.3e-06 55.1 75 40.0
Rhsim13G0027000 Rhododendron simsii HOM05D008542 ORTHO05D009486 9.7e-06 53.5 91 37.4


User provided reference genes

Program Settings