Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen06g002670 Solanum pennellii HOM05D005417 ORTHO05D002591 5.0e-169 597.8 331 100.0
Solyc06g007790.1 Solanum lycopersicum HOM05D005417 ORTHO05D002591 2.5e-160 568.9 334 95.8
PGSC0003DMG400022034 Solanum tuberosum HOM05D005417 ORTHO05D002591 2.1e-151 539.3 334 85.3
CAN.G181.55 Capsicum annuum HOM05D005417 ORTHO05D002591 4.0e-118 428.7 334 77.2
Nitab4.5_0002985g0020 Nicotiana tabacum HOM05D005417 ORTHO05D002591 2.9e-100 369.4 344 62.2
Nitab4.5_0002641g0180 Nicotiana tabacum HOM05D005417 ORTHO05D002591 1.9e-91 340.1 339 64.0
Peaxi162Scf00372g00102 Petunia axillaris HOM05D005417 ORTHO05D002591 1.7e-87 327.0 370 56.5
Peaxi162Scf00068g00216 Petunia axillaris HOM05D005417 ORTHO05D002591 5.0e-60 235.7 288 52.8
Nitab4.5_0001161g0100 Nicotiana tabacum HOM05D005417 ORTHO05D002591 2.3e-57 226.9 398 47.5
Dinv19167 Davidia involucrata HOM05D005417 ORTHO05D002591 4.4e-56 222.6 373 44.2
PGSC0003DMG400017495 Solanum tuberosum HOM05D005417 ORTHO05D002591 9.5e-51 204.9 369 48.2
CAN.G800.6 Capsicum annuum HOM05D005417 ORTHO05D002591 3.6e-50 203.0 352 44.0
Nitab4.5_0003020g0050 Nicotiana tabacum HOM05D005417 ORTHO05D002591 1.4e-49 201.1 243 51.4
Cfa010419 Carpinus fangiana HOM05D005417 ORTHO05D002591 6.8e-49 198.7 351 45.3
QL09p051098 Quercus lobata HOM05D005417 ORTHO05D002591 1.4e-46 191.0 375 37.9
Actinidia39427 Actinidia chinensis HOM05D005417 ORTHO05D002591 1.8e-46 190.7 328 43.6
CSS0019537 Camellia sinensis var. sinensis HOM05D005417 ORTHO05D002591 4.1e-46 189.5 399 39.1
Nitab4.5_0003656g0060 Nicotiana tabacum HOM05D005417 ORTHO05D002591 7.0e-46 188.7 298 43.6
Oeu051530.1 Olea europaea HOM05D005417 ORTHO05D002591 1.6e-45 187.6 383 40.2
QL09p050923 Quercus lobata HOM05D005417 ORTHO05D002591 2.7e-45 186.8 385 37.9
Nitab4.5_0013864g0020 Nicotiana tabacum HOM05D005417 ORTHO05D002591 5.6e-43 179.1 197 51.8
Oeu007785.1 Olea europaea HOM05D005417 ORTHO05D002591 5.6e-43 179.1 340 40.6
Potri.002G246400 Populus trichocarpa HOM05D005417 ORTHO05D002591 1.2e-42 177.9 433 39.0
Manes.12G047700 Manihot esculenta HOM05D005417 ORTHO05D002591 1.6e-42 177.6 375 39.2
Sopen09g022730 Solanum pennellii HOM05D005417 ORTHO05D002591 3.6e-42 176.4 351 45.3
Solyc09g059550.1 Solanum lycopersicum HOM05D005417 ORTHO05D002591 1.0e-41 174.9 365 44.4
Peaxi162Scf01312g00003 Petunia axillaris HOM05D005417 ORTHO05D002591 1.3e-39 167.9 189 51.3
TWI75G1481 Tripterygium wilfordii HOM05D005417 ORTHO05D002591 6.4e-39 165.6 394 35.0
Cc01_g16680 Coffea canephora HOM05D005417 ORTHO05D002591 2.4e-38 163.7 469 37.5
Medtr7g055560 Medicago truncatula HOM05D005417 ORTHO05D002591 2.4e-38 163.7 407 40.3
Medtr7g055747 Medicago truncatula HOM05D005417 ORTHO05D002591 2.4e-38 163.7 407 40.3
Prupe.8G197900 Prunus persica HOM05D005417 ORTHO05D002591 3.2e-38 163.3 411 34.1
Sabra02G0187500 Salix brachista HOM05D005417 ORTHO05D002591 5.4e-38 162.5 448 37.1
SalBow6G1220 Salvia bowleyana HOM05D005417 ORTHO05D002591 9.2e-38 161.8 204 49.0
Dinv12644 Davidia involucrata HOM05D005417 ORTHO05D002591 1.6e-37 161.0 382 41.1
MSTRG.18834 Avicennia marina HOM05D005417 ORTHO05D002591 4.6e-37 159.5 340 37.4
Solyc06g083330.2 Solanum lycopersicum HOM05D005417 ORTHO05D002591 6.0e-37 159.1 193 47.7
COL.COLO4_08651 Corchorus olitorius HOM05D005417 ORTHO05D002591 2.3e-36 157.1 164 54.9
Rhsim13G0048000 Rhododendron simsii HOM05D005417 ORTHO05D002591 1.5e-35 154.5 320 39.7
Gohir.A07G161200 Gossypium hirsutum HOM05D005417 ORTHO05D002591 2.5e-35 153.7 339 44.0
Gorai.001G188400 Gossypium raimondii HOM05D005417 ORTHO05D002591 3.3e-35 153.3 339 39.8
Lalb_Chr03g0041401 Lupinus albus HOM05D005417 ORTHO05D002591 4.3e-35 152.9 134 61.9
SGA_v2.0_scaffold156G37265 Striga asiatica HOM05D005417 ORTHO05D002591 4.3e-35 152.9 221 44.8
Psat3g149440 Pisum sativum HOM05D005417 ORTHO05D002591 5.6e-35 152.5 207 45.4
PGSC0003DMG400020102 Solanum tuberosum HOM05D005417 ORTHO05D002591 7.3e-35 152.1 193 46.1
DCAR_012672 Daucus carota HOM05D005417 ORTHO05D002591 1.2e-34 151.4 382 32.7
Gohir.A11G139800 Gossypium hirsutum HOM05D005417 ORTHO05D002591 1.6e-34 151.0 137 60.6
TWI18G1450 Tripterygium wilfordii HOM05D005417 ORTHO05D002591 2.8e-34 150.2 318 38.4
Rhsim01G0253400 Rhododendron simsii HOM05D005417 ORTHO05D002591 6.2e-34 149.1 408 34.1
arahy.Tifrunner.gnm1.ann1.K8JSLF Arachis hypogaea HOM05D005417 ORTHO05D002591 1.1e-33 148.3 205 45.9
Lsat_1_v5_gn_9_14981 Lactuca sativa HOM05D005417 ORTHO05D002591 1.4e-33 147.9 367 39.5
CiPaw.14G038800 Carya illinoinensis HOM05D005417 ORTHO05D002591 2.3e-33 147.1 251 40.6
Gohir.D11G145866 Gossypium hirsutum HOM05D005417 ORTHO05D002591 3.1e-33 146.7 138 60.1
Cpa.g.sc34.103 Carica papaya HOM05D005417 ORTHO05D002591 4.0e-33 146.4 389 38.8
Duzib211G0292 Durio zibethinus HOM05D005417 ORTHO05D002591 4.0e-33 146.4 311 39.9
Eucgr.K02134 Eucalyptus grandis HOM05D005417 ORTHO05D002591 5.2e-33 146.0 133 59.4
Glyma.08G348101 Glycine max HOM05D005417 ORTHO05D002591 5.2e-33 146.0 126 61.9
Gorai.007G156400 Gossypium raimondii HOM05D005417 ORTHO05D002591 5.2e-33 146.0 426 35.4
Sopen06g034710 Solanum pennellii HOM05D005417 ORTHO05D002591 5.2e-33 146.0 193 44.6
Thecc.01G219200 Theobroma cacao HOM05D005417 ORTHO05D002591 1.2e-32 144.8 122 61.5
CiPaw.13G049000 Carya illinoinensis HOM05D005417 ORTHO05D002591 2.0e-32 144.1 243 41.2
Gohir.A07G092900 Gossypium hirsutum HOM05D005417 ORTHO05D002591 3.4e-32 143.3 309 41.1
Ca_03471_v3 Cicer arietinum L. HOM05D005417 ORTHO05D002591 1.3e-31 141.4 209 45.5
Lj1g0009273 Lotus japonicus HOM05D005417 ORTHO05D002591 1.3e-31 141.4 405 33.3
Glyma.18G159700 Glycine max HOM05D005417 ORTHO05D002591 2.9e-31 140.2 126 60.3
TAR365G0760 Trochodendron aralioides HOM05D005417 ORTHO05D002591 2.9e-31 140.2 455 34.3
Aqoxy2G03972 Aquilegia oxysepala HOM05D005417 ORTHO05D002591 3.7e-31 139.8 248 41.5
Manes.13G049800 Manihot esculenta HOM05D005417 ORTHO05D002591 6.4e-31 139.0 250 42.4
Migut.D02505 Erythranthe guttata HOM05D005417 ORTHO05D002591 1.4e-30 137.9 158 52.5
Aa31sc95G70 Aethionema arabicum HOM05D005417 ORTHO05D002591 1.9e-30 137.5 344 35.8
PGR083G2240 Punica granatum HOM05D005417 ORTHO05D002591 3.2e-30 136.7 356 32.9
TAR636G0419 Trochodendron aralioides HOM05D005417 ORTHO05D002591 3.2e-30 136.7 108 65.7
HanXRQChr10g0279531 Helianthus annuus HOM05D005417 ORTHO05D002591 5.4e-30 136.0 137 55.5
BcaC06g35784 Brassica carinata HOM05D005417 ORTHO05D002591 9.2e-30 135.2 391 33.0
BolC7t41558H Brassica oleracea HOM05D005417 ORTHO05D002591 9.2e-30 135.2 391 33.0
ClCG07G002110 Citrullus lanatus HOM05D005417 ORTHO05D002591 9.2e-30 135.2 126 57.1
MELO3C022719.2 Cucumis melo HOM05D005417 ORTHO05D002591 9.2e-30 135.2 261 39.5
ECA247G2945 Erigeron canadensis HOM05D005417 ORTHO05D002591 1.2e-29 134.8 283 38.2
Atru.chr6.1429 Acer truncatum HOM05D005417 ORTHO05D002591 2.1e-29 134.0 280 40.4
vmacro02785 Vaccinium macrocarpon HOM05D005417 ORTHO05D002591 2.1e-29 134.0 386 32.1
Ciclev10024373m.g Citrus clementina HOM05D005417 ORTHO05D002591 2.7e-29 133.7 134 56.0
C07p10920 Brassica napus HOM05D005417 ORTHO05D002591 4.6e-29 132.9 391 32.2
Gohir.D07G097400 Gossypium hirsutum HOM05D005417 ORTHO05D002591 4.6e-29 132.9 306 38.6
VMungo1383G0191 Vigna mungo HOM05D005417 ORTHO05D002591 1.3e-28 131.3 445 30.8
RcHm_v2.0_Chr6g0284001 Rosa chinensis HOM05D005417 ORTHO05D002591 3.0e-28 130.2 136 56.6
MD05G1170600 Malus domestica HOM05D005417 ORTHO05D002591 3.9e-28 129.8 407 30.5
EL10Ac7g17913 Beta vulgaris HOM05D005417 ORTHO05D002591 5.1e-28 129.4 366 35.0
FAN27G1148 Fragaria x ananassa HOM05D005417 ORTHO05D002591 6.6e-28 129.0 137 54.7
Phvul.008G132000 Phaseolus vulgaris HOM05D005417 ORTHO05D002591 1.1e-27 128.3 468 29.9
Gorai.001G104900 Gossypium raimondii HOM05D005417 ORTHO05D002591 1.9e-27 127.5 292 39.4
ECA248G2280 Erigeron canadensis HOM05D005417 ORTHO05D002591 3.3e-27 126.7 319 35.4
BraA07t28509Z Brassica rapa HOM05D005417 ORTHO05D002591 1.2e-26 124.8 387 31.3
A07p07230 Brassica napus HOM05D005417 ORTHO05D002591 2.8e-26 123.6 385 31.4
Sc05g0001930 Simmondsia chinensis HOM05D005417 ORTHO05D002591 2.8e-26 123.6 369 34.1
FvH4_2g18490 Fragaria vesca HOM05D005417 ORTHO05D002591 4.7e-26 122.9 210 41.4
FAN24G0779 Fragaria x ananassa HOM05D005417 ORTHO05D002591 4.7e-26 122.9 210 41.4
FAN15G1498 Fragaria x ananassa HOM05D005417 ORTHO05D002591 6.2e-26 122.5 231 40.7
vmacro14737 Vaccinium macrocarpon HOM05D005417 ORTHO05D002591 1.1e-25 121.7 139 49.6
Nn1g07983 Nelumbo nucifera HOM05D005417 ORTHO05D002591 1.8e-25 120.9 402 36.1
AL3G40820 Arabidopsis lyrata HOM05D005417 ORTHO05D002591 1.2e-24 118.2 397 35.8
PSO063G3464 Papaver somniferum HOM05D005417 ORTHO05D002591 2.6e-24 117.1 402 30.1
PSO017G4959 Papaver somniferum HOM05D005417 ORTHO05D002591 3.4e-24 116.7 189 42.9
Sp3g22720 Schrenkiella parvula HOM05D005417 ORTHO05D002591 3.4e-24 116.7 407 31.0
PGR044G1095 Punica granatum HOM05D005417 ORTHO05D002591 2.2e-23 114.0 403 32.0
MSTRG.20970 Avicennia marina HOM05D005417 ORTHO05D002591 6.4e-23 112.5 137 46.7
AT3G25130 Arabidopsis thaliana HOM05D005417 ORTHO05D002591 1.4e-22 111.3 388 34.3
HanXRQChr01g0015481 Helianthus annuus HOM05D005417 ORTHO05D002591 2.4e-22 110.5 194 39.7
SGA_v2.0_scaffold3G01638 Striga asiatica HOM05D005417 ORTHO05D002591 4.1e-22 109.8 190 42.6
HPP92_009946 Vanilla planifolia HOM05D005417 ORTHO05D002591 5.4e-22 109.4 130 50.8
MBI11_g07415_MAGBIO Magnolia biondii HOM05D005417 ORTHO05D002591 7.1e-22 109.0 301 33.2
Sed0010610 Sechium edule HOM05D005417 ORTHO05D002591 1.6e-21 107.8 130 52.3
BcaB06g26721 Brassica carinata HOM05D005417 ORTHO05D002591 4.6e-21 106.3 148 45.3
ATR0561G108 Amborella trichopoda HOM05D005417 ORTHO05D002591 1.0e-20 105.1 180 41.7
MD10G1158800 Malus domestica HOM05D005417 ORTHO05D002591 1.0e-20 105.1 399 29.8
Nn3g20048 Nelumbo nucifera HOM05D005417 ORTHO05D002591 5.1e-20 102.8 388 33.0
Nn3g20049 Nelumbo nucifera HOM05D005417 ORTHO05D002591 5.1e-20 102.8 388 33.0
MBI07_g27364_MAGBIO Magnolia biondii HOM05D005417 ORTHO05D002591 6.6e-20 102.4 127 51.2
CARHR101450 Cardamine hirsuta HOM05D005417 ORTHO05D002591 1.1e-19 101.7 306 31.0
Haze_03369 Corylus avellana HOM05D005417 ORTHO05D002591 1.1e-19 101.7 259 39.8
Carub.0003s2546 Capsella rubella HOM05D005417 ORTHO05D002591 2.5e-19 100.5 391 35.0
Gohir.D07G164700 Gossypium hirsutum HOM05D005417 ORTHO05D002591 7.3e-19 99.0 322 39.1
THA.LOC104804626 Tarenaya hassleriana HOM05D005417 ORTHO05D002591 1.4e-17 94.7 282 29.1
SalBow5G5435 Salvia bowleyana HOM05D005417 ORTHO05D002591 1.2e-16 91.7 165 39.4
TPR.G6388 Trifolium pratense HOM05D005417 ORTHO05D002591 7.6e-16 89.0 58 72.4
unitig_899.g15407 Utricularia gibba HOM05D005417 ORTHO05D002591 4.2e-14 83.2 117 46.2
TPR.G976 Trifolium pratense HOM05D005417 ORTHO05D002591 7.1e-14 82.4 375 29.6
unitig_749.g13592 Utricularia gibba HOM05D005417 ORTHO05D002591 6.0e-13 79.3 322 27.3
ClCG09G008640 Citrullus lanatus HOM05D005417 ORTHO05D002591 1.4e-09 68.2 197 31.5
Os11g0458100 Oryza sativa ssp. japonica HOM05D005417 ORTHO05D002591 1.4e-09 68.2 147 36.1
Zm00001eb090480 Zea mays HOM05D005417 ORTHO05D002591 2.4e-09 67.4 286 25.5
MELO3C021078.2 Cucumis melo HOM05D005417 ORTHO05D002591 3.1e-09 67.0 339 27.4
AUR62016544 Chenopodium quinoa HOM05D005417 ORTHO05D002591 2.6e-08 63.9 215 30.7
Lj5g0025661 Lotus japonicus HOM05D005417 ORTHO05D002591 1.7e-07 61.2 139 34.5
SEGI_26671 Sequoiadendron giganteum HOM05D038370 ORTHO05D037583 7.1e-06 55.8 84 42.9


User provided reference genes

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