Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen06g002040 Solanum pennellii HOM05D004233 ORTHO05D003507 1.0e-67 260.0 140 100.0
Solyc06g006090.1 Solanum lycopersicum HOM05D004233 ORTHO05D003507 8.9e-67 256.9 140 99.3
PGSC0003DMG400004152 Solanum tuberosum HOM05D004233 ORTHO05D003507 2.8e-60 235.3 140 91.4
CAN.G780.3 Capsicum annuum HOM05D004233 ORTHO05D003507 1.2e-52 209.9 141 83.0
Nitab4.5_0000102g0150 Nicotiana tabacum HOM05D004233 ORTHO05D003507 9.9e-42 173.7 142 74.6
Peaxi162Scf00056g00201 Petunia axillaris HOM05D004233 ORTHO05D003507 8.1e-28 127.5 140 62.1
Oeu045519.1 Olea europaea HOM05D004233 ORTHO05D003507 4.9e-17 91.7 139 46.8
Cc01_g13980 Coffea canephora HOM05D004233 ORTHO05D003507 3.2e-16 89.0 138 44.9
Lsat_1_v5_gn_9_20140 Lactuca sativa HOM05D004233 ORTHO05D003507 1.2e-15 87.0 113 48.7
Actinidia25149 Actinidia chinensis HOM05D004233 ORTHO05D003507 2.1e-15 86.3 139 42.4
Hma1.2p1_0227F.1_g096330 Hydrangea macrophylla HOM05D004233 ORTHO05D003507 1.3e-12 77.0 139 40.3
Ciclev10013109m.g Citrus clementina HOM05D004233 ORTHO05D003507 2.1e-12 76.3 87 47.1
Dinv37074 Davidia involucrata HOM05D004233 ORTHO05D003507 3.7e-12 75.5 87 47.1
Cfa017246 Carpinus fangiana HOM05D004233 ORTHO05D003507 6.3e-12 74.7 88 47.7
QL07p036016 Quercus lobata HOM05D004233 ORTHO05D003507 2.4e-11 72.8 85 47.1
Atru.chr8.2208 Acer truncatum HOM05D004233 ORTHO05D003507 6.9e-11 71.2 88 47.7
Potri.016G112700 Populus trichocarpa HOM05D004233 ORTHO05D003507 1.2e-10 70.5 87 43.7
Hma1.2p1_0763F.1_g214800 Hydrangea macrophylla HOM05D004233 ORTHO05D003507 1.5e-10 70.1 89 44.9
Manes.09G103100 Manihot esculenta HOM05D004233 ORTHO05D003507 3.4e-10 68.9 87 43.7
Sabra16G0108400 Salix brachista HOM05D004233 ORTHO05D003507 4.5e-10 68.6 90 42.2
Duzib150G0257 Durio zibethinus HOM05D004233 ORTHO05D003507 5.9e-10 68.2 123 40.7
Rhsim13G0071800 Rhododendron simsii HOM05D004233 ORTHO05D003507 7.6e-10 67.8 140 39.3
Ciclev10029412m.g Citrus clementina HOM05D004233 ORTHO05D003507 1.0e-09 67.4 138 33.3
Gohir.A01G225900 Gossypium hirsutum HOM05D004233 ORTHO05D003507 5.0e-09 65.1 76 46.1
TAR623G0525 Trochodendron aralioides HOM05D004233 ORTHO05D003507 5.0e-09 65.1 89 42.7
AT1G07300 Arabidopsis thaliana HOM05D005325 ORTHO05D003507 8.5e-09 64.3 139 32.4
COL.COLO4_14571 Corchorus olitorius HOM05D004233 ORTHO05D003507 8.5e-09 64.3 100 36.0
AL1G17450 Arabidopsis lyrata HOM05D005325 ORTHO05D003507 1.1e-08 63.9 100 42.0
Gohir.D07G106900 Gossypium hirsutum HOM05D004233 ORTHO05D003507 1.1e-08 63.9 124 36.3
CAN.G394.108 Capsicum annuum HOM05D034108 ORTHO05D003507 1.4e-08 63.5 74 58.1
Gohir.D01G215600 Gossypium hirsutum HOM05D004233 ORTHO05D003507 1.4e-08 63.5 76 44.7
Gorai.002G261800 Gossypium raimondii HOM05D004233 ORTHO05D003507 1.4e-08 63.5 76 44.7
Duzib106G0630 Durio zibethinus HOM05D004233 ORTHO05D003507 1.9e-08 63.2 102 37.3
Glyma.03G078400 Glycine max HOM05D004233 ORTHO05D003507 2.5e-08 62.8 114 40.4
PGR004G1616 Punica granatum HOM05D004233 ORTHO05D003507 2.5e-08 62.8 76 46.1
QL01p037420 Quercus lobata HOM05D004233 ORTHO05D003507 2.5e-08 62.8 89 42.7
Carub.0001s0660 Capsella rubella HOM05D005325 ORTHO05D003507 3.2e-08 62.4 128 36.7
Gohir.A05G089700 Gossypium hirsutum HOM05D004233 ORTHO05D003507 3.2e-08 62.4 102 44.1
Gorai.001G115000 Gossypium raimondii HOM05D004233 ORTHO05D003507 3.2e-08 62.4 122 36.1
Sp1g06050 Schrenkiella parvula HOM05D005325 ORTHO05D003507 3.2e-08 62.4 141 34.8
Thecc.05G020400 Theobroma cacao HOM05D004233 ORTHO05D003507 3.2e-08 62.4 103 38.8
VMungo0331G0885 Vigna mungo HOM05D004233 ORTHO05D003507 3.2e-08 62.4 90 41.1
Gohir.A07G102900 Gossypium hirsutum HOM05D004233 ORTHO05D003507 4.2e-08 62.0 124 36.3
PGSC0003DMG400030486 Solanum tuberosum HOM05D034108 ORTHO05D003507 4.2e-08 62.0 113 47.8
Aa31LG5G6840 Aethionema arabicum HOM05D005325 ORTHO05D003507 5.5e-08 61.6 139 32.4
CiPaw.09G207200 Carya illinoinensis HOM05D004233 ORTHO05D003507 5.5e-08 61.6 88 44.3
MSTRG.10228 Avicennia marina HOM05D004233 ORTHO05D003507 9.3e-08 60.8 90 44.4
CARHR007020 Cardamine hirsuta HOM05D005325 ORTHO05D003507 9.3e-08 60.8 93 39.8
Gohir.D05G090600 Gossypium hirsutum HOM05D004233 ORTHO05D003507 9.3e-08 60.8 102 44.1
Gorai.009G093100 Gossypium raimondii HOM05D004233 ORTHO05D003507 9.3e-08 60.8 102 44.1
Sabra06G0075200 Salix brachista HOM05D004233 ORTHO05D003507 9.3e-08 60.8 102 37.3
Sopen06g033170 Solanum pennellii HOM05D034108 ORTHO05D003507 9.3e-08 60.8 100 46.0
MELO3C009185.2 Cucumis melo HOM05D004233 ORTHO05D003507 1.2e-07 60.5 87 40.2
Thhalv10009101m.g Eutrema salsugineum HOM05D005325 ORTHO05D003507 1.2e-07 60.5 98 35.7
Nn2g13635 Nelumbo nucifera HOM05D004233 ORTHO05D003507 1.2e-07 60.5 131 34.4
Potri.006G097700 Populus trichocarpa HOM05D004233 ORTHO05D003507 1.2e-07 60.5 102 36.3
Sp4g12360 Schrenkiella parvula HOM05D005325 ORTHO05D003507 1.2e-07 60.5 91 38.5
A10p05870 Brassica napus HOM05D005325 ORTHO05D003507 1.6e-07 60.1 90 37.8
Haze_24266 Corylus avellana HOM05D004233 ORTHO05D003507 1.6e-07 60.1 89 39.3
ClCG10G021920 Citrullus lanatus HOM05D004233 ORTHO05D003507 2.1e-07 59.7 87 40.2
BcaC07g42009 Brassica carinata HOM05D005325 ORTHO05D003507 2.7e-07 59.3 114 36.8
BcaC07g42458 Brassica carinata HOM05D005325 ORTHO05D003507 2.7e-07 59.3 94 39.4
BolC5t29309H Brassica oleracea HOM05D005325 ORTHO05D003507 2.7e-07 59.3 94 39.4
BraA09t41987Z Brassica rapa HOM05D005325 ORTHO05D003507 2.7e-07 59.3 142 35.2
DCAR_007388 Daucus carota HOM05D004233 ORTHO05D003507 2.7e-07 59.3 130 34.6
Phvul.010G005000 Phaseolus vulgaris HOM05D004233 ORTHO05D003507 2.7e-07 59.3 91 38.5
TWI79G1354 Tripterygium wilfordii HOM05D004233 ORTHO05D003507 2.7e-07 59.3 122 38.5
Glyma.01G113100 Glycine max HOM05D004233 ORTHO05D003507 3.6e-07 58.9 111 38.7
Gohir.A09G163800 Gossypium hirsutum HOM05D004233 ORTHO05D003507 3.6e-07 58.9 139 33.8
Nn1g02891 Nelumbo nucifera HOM05D004233 ORTHO05D003507 3.6e-07 58.9 113 38.9
C05p05370 Brassica napus HOM05D005325 ORTHO05D003507 4.6e-07 58.5 91 40.7
Gohir.D09G159300 Gossypium hirsutum HOM05D004233 ORTHO05D003507 4.6e-07 58.5 139 33.8
Gorai.006G181000 Gossypium raimondii HOM05D004233 ORTHO05D003507 4.6e-07 58.5 139 33.8
BraA10t42849Z Brassica rapa HOM05D005325 ORTHO05D003507 6.1e-07 58.2 91 39.6
CiPaw.13G080500 Carya illinoinensis HOM05D004233 ORTHO05D003507 6.1e-07 58.2 112 36.6
Duzib093G0978 Durio zibethinus HOM05D004233 ORTHO05D003507 6.1e-07 58.2 102 37.3
Duzib128G0556 Durio zibethinus HOM05D004233 ORTHO05D003507 6.1e-07 58.2 102 37.3
Migut.N00891 Erythranthe guttata HOM05D004233 ORTHO05D003507 6.1e-07 58.2 115 40.9
Eucgr.K02995 Eucalyptus grandis HOM05D004233 ORTHO05D003507 6.1e-07 58.2 103 39.8
Prupe.6G271900 Prunus persica HOM05D004233 ORTHO05D003507 6.1e-07 58.2 76 40.8
Gohir.A04G088850 Gossypium hirsutum HOM05D004233 ORTHO05D003507 7.9e-07 57.8 86 43.0
Gohir.D04G129214 Gossypium hirsutum HOM05D004233 ORTHO05D003507 1.0e-06 57.4 86 43.0
Gorai.012G112300 Gossypium raimondii HOM05D004233 ORTHO05D003507 1.0e-06 57.4 86 43.0
Potri.009G043501 Populus trichocarpa HOM05D004233 ORTHO05D003507 1.0e-06 57.4 89 47.2
SalBow4G0303 Salvia bowleyana HOM05D004233 ORTHO05D003507 1.0e-06 57.4 87 41.4
TWI77G0758 Tripterygium wilfordii HOM05D004233 ORTHO05D003507 1.0e-06 57.4 103 38.8
TAR369G1066 Trochodendron aralioides HOM05D004233 ORTHO05D003507 1.0e-06 57.4 89 41.6
C08p50660 Brassica napus HOM05D005325 ORTHO05D003507 1.3e-06 57.0 114 36.0
BolC8t52594H Brassica oleracea HOM05D005325 ORTHO05D003507 1.3e-06 57.0 114 36.0
Cpa.g.sc163.4 Carica papaya HOM05D004233 ORTHO05D003507 1.3e-06 57.0 92 40.2
THA.LOC104823286 Tarenaya hassleriana HOM05D004233 ORTHO05D003507 1.3e-06 57.0 80 42.5
CsaV3_3G034080 Cucumis sativus L. HOM05D004233 ORTHO05D003507 1.8e-06 56.6 87 39.1
Psat3g130680 Pisum sativum HOM05D004233 ORTHO05D003507 1.8e-06 56.6 86 43.0
CiPaw.14G060900 Carya illinoinensis HOM05D004233 ORTHO05D003507 2.3e-06 56.2 114 39.5
SalBow2G0796 Salvia bowleyana HOM05D004233 ORTHO05D003507 2.3e-06 56.2 77 42.9
Aa31LG1G6560 Aethionema arabicum HOM05D005325 ORTHO05D003507 3.0e-06 55.8 139 32.4
Sed0021305 Sechium edule HOM05D004233 ORTHO05D003507 6.7e-06 54.7 87 37.9
Glyma.07G146500 Glycine max HOM05D004233 ORTHO05D003507 8.7e-06 54.3 86 38.4


User provided reference genes

Program Settings