Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc06g005610.1 Solanum lycopersicum HOM05D018369 ORTHO05D001075 1.6e-36 156.0 106 100.0
Sopen06g001570 Solanum pennellii HOM05D018369 ORTHO05D001075 1.6e-36 156.0 106 100.0
PGSC0003DMG400002141 Solanum tuberosum HOM05D018369 ORTHO05D001075 1.6e-36 156.0 106 100.0
CAN.G141.1 Capsicum annuum HOM05D018369 ORTHO05D001075 6.1e-36 154.1 106 94.3
Cc01_g13180 Coffea canephora HOM05D001415 ORTHO05D001075 4.1e-16 88.2 106 74.5
CAN.G394.70 Capsicum annuum HOM05D018369 ORTHO05D001075 1.3e-14 83.2 121 60.3
Solyc06g076320.1 Solanum lycopersicum HOM05D001415 ORTHO05D001075 2.5e-13 79.0 121 61.2
Nitab4.5_0008249g0010 Nicotiana tabacum HOM05D018369 ORTHO05D001075 5.6e-13 77.8 39 97.4
Nitab4.5_0015123g0010 Nicotiana tabacum HOM05D018369 ORTHO05D001075 1.2e-12 76.6 39 94.9
HanXRQChr11g0327601 Helianthus annuus HOM05D001415 ORTHO05D001075 4.7e-12 74.7 106 65.1
MSTRG.21203 Avicennia marina HOM05D001415 ORTHO05D001075 6.2e-12 74.3 115 56.5
HanXRQChr01g0010481 Helianthus annuus HOM05D001415 ORTHO05D001075 6.8e-11 70.9 117 42.7
Duzib168G2106 Durio zibethinus HOM05D001415 ORTHO05D001075 3.4e-10 68.6 111 51.4
Gohir.A05G093900 Gossypium hirsutum HOM05D001415 ORTHO05D001075 4.4e-10 68.2 111 55.9
Gohir.D05G094400 Gossypium hirsutum HOM05D001415 ORTHO05D001075 4.4e-10 68.2 111 55.9
Gorai.009G097500 Gossypium raimondii HOM05D001415 ORTHO05D001075 4.4e-10 68.2 111 55.9
Lsat_1_v5_gn_9_24441 Lactuca sativa HOM05D008503 ORTHO05D001075 7.6e-10 67.4 106 65.1
Oeu045612.1 Olea europaea HOM05D001415 ORTHO05D001075 9.9e-10 67.0 111 46.8
Oeu053887.1 Olea europaea HOM05D001415 ORTHO05D001075 1.7e-09 66.2 111 51.4
Duzib150G0909 Durio zibethinus HOM05D001415 ORTHO05D001075 2.2e-09 65.9 110 58.2
Lsat_1_v5_gn_5_169241 Lactuca sativa HOM05D001415 ORTHO05D001075 2.2e-09 65.9 121 47.1
RcHm_v2.0_Chr5g0065921 Rosa chinensis HOM05D001415 ORTHO05D001075 2.9e-09 65.5 99 59.6
TWI79G1693 Tripterygium wilfordii HOM05D001415 ORTHO05D001075 3.8e-09 65.1 107 43.9
Ciclev10030229m.g Citrus clementina HOM05D001415 ORTHO05D001075 6.4e-09 64.3 108 51.9
Duzib170G0931 Durio zibethinus HOM05D001415 ORTHO05D001075 3.2e-08 62.0 111 52.3
Thecc.09G317800 Theobroma cacao HOM05D001415 ORTHO05D001075 4.1e-08 61.6 112 58.9
TWI31G0218 Tripterygium wilfordii HOM05D001415 ORTHO05D001075 7.1e-08 60.8 106 38.7
Potri.001G242800 Populus trichocarpa HOM05D001415 ORTHO05D001075 9.2e-08 60.5 106 59.4
unitig_899.g15255 Utricularia gibba HOM05D001415 ORTHO05D001075 2.1e-07 59.3 105 62.9
Lalb_Chr19g0137921 Lupinus albus HOM05D001415 ORTHO05D001075 2.7e-07 58.9 108 44.4
SalBow3G1548 Salvia bowleyana HOM05D001415 ORTHO05D001075 3.5e-07 58.5 111 39.6
Atru.chr3.3969 Acer truncatum HOM05D001415 ORTHO05D001075 4.6e-07 58.2 107 51.4
A04p22250 Brassica napus HOM05D008503 ORTHO05D001075 4.6e-07 58.2 118 46.6
BraA04t17777Z Brassica rapa HOM05D008503 ORTHO05D001075 4.6e-07 58.2 118 46.6
BcaB06g28285 Brassica carinata HOM05D001415 ORTHO05D001075 6.0e-07 57.8 118 51.7
BcaB06g28286 Brassica carinata HOM05D001415 ORTHO05D001075 6.0e-07 57.8 118 51.7
CiPaw.13G091000 Carya illinoinensis HOM05D001415 ORTHO05D001075 6.0e-07 57.8 36 72.2
COL.COLO4_18559 Corchorus olitorius HOM05D001415 ORTHO05D001075 6.0e-07 57.8 107 53.3
Medtr4g064520 Medicago truncatula HOM05D001415 ORTHO05D001075 6.0e-07 57.8 102 55.9
Sed0008013 Sechium edule HOM05D001415 ORTHO05D001075 6.0e-07 57.8 113 38.9
unitig_746.g26724 Utricularia gibba HOM05D001415 ORTHO05D001075 6.0e-07 57.8 103 48.5
Potri.009G034300 Populus trichocarpa HOM05D001415 ORTHO05D001075 7.8e-07 57.4 106 57.5
Hma1.2p1_0757F.1_g213305 Hydrangea macrophylla HOM05D001415 ORTHO05D001075 1.0e-06 57.0 99 63.6
Hma1.2p1_0757F.1_g213310 Hydrangea macrophylla HOM05D001415 ORTHO05D001075 1.0e-06 57.0 99 63.6
Sc12g0001300 Simmondsia chinensis HOM05D001415 ORTHO05D001075 1.0e-06 57.0 39 66.7
Glyma.12G061000 Glycine max HOM05D008503 ORTHO05D001075 1.3e-06 56.6 114 40.4
TPR.G23565 Trifolium pratense HOM05D001415 ORTHO05D001075 1.7e-06 56.2 102 42.2
Cpa.g.sc81.113 Carica papaya HOM05D001415 ORTHO05D001075 2.3e-06 55.8 36 69.4
Cfa011527 Carpinus fangiana HOM05D001415 ORTHO05D001075 2.3e-06 55.8 36 69.4
Haze_24132 Corylus avellana HOM05D001415 ORTHO05D001075 2.3e-06 55.8 36 69.4
Manes.01G170700 Manihot esculenta HOM05D001415 ORTHO05D001075 2.3e-06 55.8 106 52.8
Phvul.011G062700 Phaseolus vulgaris HOM05D001415 ORTHO05D001075 2.3e-06 55.8 109 54.1
CiPaw.14G067100 Carya illinoinensis HOM05D001415 ORTHO05D001075 3.0e-06 55.5 106 61.3
MELO3C020615.2 Cucumis melo HOM05D001415 ORTHO05D001075 3.0e-06 55.5 110 43.6
Glyma.18G076400 Glycine max HOM05D001415 ORTHO05D001075 3.0e-06 55.5 37 67.6
Lalb_Chr03g0026501 Lupinus albus HOM05D001415 ORTHO05D001075 5.1e-06 54.7 106 61.3
Sc21g0005940 Simmondsia chinensis HOM05D001415 ORTHO05D001075 5.1e-06 54.7 118 55.1
MD03G1087500 Malus domestica HOM05D001415 ORTHO05D001075 6.6e-06 54.3 100 52.0
Manes.02G130200 Manihot esculenta HOM05D001415 ORTHO05D001075 6.6e-06 54.3 106 47.2
CSS0027316 Camellia sinensis var. sinensis HOM05D001415 ORTHO05D001075 8.6e-06 53.9 120 47.5
Gohir.A13G227216 Gossypium hirsutum HOM05D001415 ORTHO05D001075 8.6e-06 53.9 36 66.7
Gohir.D13G232500 Gossypium hirsutum HOM05D001415 ORTHO05D001075 8.6e-06 53.9 36 66.7
Gorai.013G263300 Gossypium raimondii HOM05D001415 ORTHO05D001075 8.6e-06 53.9 36 66.7


User provided reference genes

Program Settings