Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen06g001340 Solanum pennellii HOM05D007176 ORTHO05D009050 1.4e-137 493.4 347 100.0
Solyc06g005380.3 Solanum lycopersicum HOM05D007176 ORTHO05D009050 2.4e-113 412.9 347 90.2
PGSC0003DMG400029168 Solanum tuberosum HOM05D007176 ORTHO05D009050 1.2e-112 410.6 347 89.0
CAN.G111.5 Capsicum annuum HOM05D007176 ORTHO05D009050 3.0e-108 396.0 346 87.3
Duzib106G0399 Durio zibethinus HOM05D007176 ORTHO05D009050 9.5e-102 374.4 343 69.7
Dinv16365 Davidia involucrata HOM05D007176 ORTHO05D009050 8.9e-100 367.9 344 69.2
Thecc.05G178200 Theobroma cacao HOM05D007176 ORTHO05D009050 1.5e-99 367.1 343 66.5
Peaxi162Scf00258g00925 Petunia axillaris HOM05D007176 ORTHO05D009050 9.8e-99 364.4 342 82.5
Gohir.A04G053500 Gossypium hirsutum HOM05D007176 ORTHO05D009050 2.7e-96 356.3 343 69.4
RcHm_v2.0_Chr3g0478871 Rosa chinensis HOM05D007176 ORTHO05D009050 7.8e-96 354.8 344 66.0
BcaC07g40246 Brassica carinata HOM05D007176 ORTHO05D009050 7.5e-91 338.2 344 66.6
COL.COLO4_29390 Corchorus olitorius HOM05D007176 ORTHO05D009050 9.8e-91 337.8 320 77.5
Aa31LG10G13110 Aethionema arabicum HOM05D007176 ORTHO05D009050 5.4e-89 332.0 344 64.5
Nitab4.5_0008255g0020 Nicotiana tabacum HOM05D007176 ORTHO05D009050 3.0e-87 326.2 346 62.7
A09p51090 Brassica napus HOM05D007176 ORTHO05D009050 3.9e-87 325.9 368 61.7
THA.LOC104802720 Tarenaya hassleriana HOM05D007176 ORTHO05D009050 7.3e-86 321.6 345 61.4
Migut.K00028 Erythranthe guttata HOM05D007176 ORTHO05D009050 1.2e-85 320.9 347 65.7
QL07p025011 Quercus lobata HOM05D007176 ORTHO05D009050 2.8e-85 319.7 344 67.2
GSVIVG01033441001 Vitis vinifera HOM05D007176 ORTHO05D009050 1.4e-84 317.4 319 71.5
C08p33910 Brassica napus HOM05D007176 ORTHO05D009050 4.0e-84 315.8 344 64.0
MD14G1051600 Malus domestica HOM05D007176 ORTHO05D009050 4.0e-84 315.8 344 64.0
TAR633G1141 Trochodendron aralioides HOM05D007176 ORTHO05D009050 5.2e-84 315.5 344 67.2
Cfa020128 Carpinus fangiana HOM05D007176 ORTHO05D009050 1.2e-83 314.3 345 52.8
TAR633G0683 Trochodendron aralioides HOM05D007176 ORTHO05D009050 2.0e-83 313.5 344 66.9
CiPaw.09G027300 Carya illinoinensis HOM05D007176 ORTHO05D009050 3.4e-83 312.8 345 67.0
FvH4_6g21620 Fragaria vesca HOM05D007176 ORTHO05D009050 4.4e-83 312.4 347 64.0
FAN14G2546 Fragaria x ananassa HOM05D007176 ORTHO05D009050 7.5e-83 311.6 347 64.0
Manes.09G039600 Manihot esculenta HOM05D007176 ORTHO05D009050 9.8e-83 311.2 341 63.9
FAN02G0922 Fragaria x ananassa HOM05D007176 ORTHO05D009050 3.7e-82 309.3 347 63.7
FAN09G2372 Fragaria x ananassa HOM05D007176 ORTHO05D009050 1.1e-81 307.8 347 63.1
Nn2g15783 Nelumbo nucifera HOM05D007176 ORTHO05D009050 1.2e-80 304.3 341 60.4
Hma1.2p1_0645F.1_g194890 Hydrangea macrophylla HOM05D007176 ORTHO05D009050 1.6e-80 303.9 344 65.7
Lju124C23T17 Lonicera japonica HOM05D007176 ORTHO05D009050 6.0e-80 302.0 332 67.2
Eucgr.K01865 Eucalyptus grandis HOM05D007176 ORTHO05D009050 2.3e-79 300.1 344 64.2
Rhsim04G0094400 Rhododendron simsii HOM05D007176 ORTHO05D009050 3.9e-79 299.3 342 70.8
Cc06_g15630 Coffea canephora HOM05D007176 ORTHO05D009050 6.6e-79 298.5 346 72.8
CARHR168930 Cardamine hirsuta HOM05D007176 ORTHO05D009050 2.5e-78 296.6 344 60.2
Haze_20048 Corylus avellana HOM05D007176 ORTHO05D009050 4.3e-78 295.8 380 53.9
Haze_20055 Corylus avellana HOM05D007176 ORTHO05D009050 4.3e-78 295.8 380 53.9
HanXRQChr10g0300591 Helianthus annuus HOM05D007176 ORTHO05D009050 4.3e-78 295.8 347 63.7
CSS0044198 Camellia sinensis var. sinensis HOM05D007176 ORTHO05D009050 7.3e-78 295.0 344 71.2
FAN05G5781 Fragaria x ananassa HOM05D007176 ORTHO05D009050 7.3e-78 295.0 353 61.8
EL10Ac3g06857 Beta vulgaris HOM05D007176 ORTHO05D009050 1.2e-77 294.3 341 61.3
Prupe.7G084400 Prunus persica HOM05D007176 ORTHO05D009050 5.2e-76 288.9 346 63.3
ECA247G1245 Erigeron canadensis HOM05D007176 ORTHO05D009050 6.8e-76 288.5 344 63.1
Lsat_1_v5_gn_9_26900 Lactuca sativa HOM05D007176 ORTHO05D009050 1.3e-74 284.3 346 60.7
Sp5g04340 Schrenkiella parvula HOM05D007176 ORTHO05D009050 3.7e-74 282.7 344 57.0
vmacro22113 Vaccinium macrocarpon HOM05D007176 ORTHO05D009050 5.4e-73 278.9 373 49.6
Potri.006G195800 Populus trichocarpa HOM05D007176 ORTHO05D009050 4.6e-72 275.8 343 62.4
MD12G1053200 Malus domestica HOM05D007176 ORTHO05D009050 5.1e-71 272.3 344 62.2
Actinidia17284 Actinidia chinensis HOM05D007176 ORTHO05D009050 6.6e-71 271.9 344 61.3
Sabra06G0150500 Salix brachista HOM05D007176 ORTHO05D009050 6.6e-71 271.9 343 62.1
Cpa.g.sc85.35 Carica papaya HOM05D007176 ORTHO05D009050 8.6e-71 271.6 347 62.0
SalBow1G6257 Salvia bowleyana HOM05D007176 ORTHO05D009050 8.6e-71 271.6 353 60.6
Lj5g0009846 Lotus japonicus HOM05D007176 ORTHO05D009050 7.3e-70 268.5 344 59.9
arahy.Tifrunner.gnm1.ann1.5B5G66 Arachis hypogaea HOM05D007176 ORTHO05D009050 2.1e-69 266.9 351 57.8
Os02g0281150 Oryza sativa ssp. japonica HOM05D007176 ORTHO05D009050 3.6e-69 266.2 346 61.0
Nitab4.5_0000009g0020 Nicotiana tabacum HOM05D007176 ORTHO05D009050 1.1e-68 264.6 415 50.1
CANSAT64G0938 Cannabis sativa HOM05D007176 ORTHO05D009050 3.1e-68 263.1 343 58.9
MBI01_g44281_MAGBIO Magnolia biondii HOM05D007176 ORTHO05D009050 6.8e-68 261.9 331 47.4
Gohir.D04G094700 Gossypium hirsutum HOM05D007176 ORTHO05D009050 1.5e-67 260.8 277 69.3
CSS0035640 Camellia sinensis var. sinensis HOM05D007176 ORTHO05D009050 2.0e-67 260.4 344 66.3
Sc13g0002490 Simmondsia chinensis HOM05D007176 ORTHO05D009050 2.6e-67 260.0 345 57.1
BolC8t50987H Brassica oleracea HOM05D000032 ORTHO05D001620 2.2e-66 256.9 277 67.9
SGA_v2.0_scaffold274G46490 Striga asiatica HOM05D007176 ORTHO05D009050 4.9e-66 255.8 161 76.4
arahy.Tifrunner.gnm1.ann1.I5CDLA Arachis hypogaea HOM05D007176 ORTHO05D009050 1.4e-65 254.2 364 55.2
Gorai.009G392400 Gossypium raimondii HOM05D007176 ORTHO05D009050 1.9e-65 253.8 310 65.2
AL5G40300 Arabidopsis lyrata HOM05D007176 ORTHO05D009050 1.2e-64 251.1 344 56.4
Lalb_Chr02g0153821 Lupinus albus HOM05D007176 ORTHO05D009050 1.2e-64 251.1 348 67.0
DCAR_019856 Daucus carota HOM05D007176 ORTHO05D009050 1.6e-64 250.8 326 44.2
TPR.G19346 Trifolium pratense HOM05D007176 ORTHO05D009050 2.1e-64 250.4 378 56.6
Thhalv10006065m.g Eutrema salsugineum HOM05D007176 ORTHO05D009050 3.0e-63 246.5 344 55.8
PGR142G3952 Punica granatum HOM05D007176 ORTHO05D009050 3.9e-63 246.1 344 56.4
Atru.BG.213.p Acer truncatum HOM05D007176 ORTHO05D009050 6.6e-63 245.4 342 59.9
Aqoxy279s002 Aquilegia oxysepala HOM05D007176 ORTHO05D009050 4.8e-61 239.2 343 65.3
Aqoxy2G00051 Aquilegia oxysepala HOM05D007176 ORTHO05D009050 4.8e-61 239.2 343 65.3
Carub.0005s2528 Capsella rubella HOM05D007176 ORTHO05D009050 4.8e-61 239.2 344 55.2
AT3G58530 Arabidopsis thaliana HOM05D007176 ORTHO05D009050 6.2e-61 238.8 344 55.2
Ciclev10012430m.g Citrus clementina HOM05D007176 ORTHO05D009050 9.0e-60 235.0 164 67.1
CDE04G3485 Ceratophyllum demersum HOM05D007176 ORTHO05D009050 5.8e-59 232.3 341 54.5
Zm00001eb237210 Zea mays HOM05D007176 ORTHO05D009050 2.9e-58 229.9 346 62.4
Medtr1g054625 Medicago truncatula HOM05D007176 ORTHO05D009050 2.7e-56 223.4 344 56.4
BraA09t40553Z Brassica rapa HOM05D000032 ORTHO05D001620 4.6e-56 222.6 278 61.9
PSO675G7508 Papaver somniferum HOM05D007176 ORTHO05D009050 4.6e-56 222.6 288 62.8
Glyma.09G105500 Glycine max HOM05D007176 ORTHO05D009050 7.3e-54 215.3 348 54.9
AUR62032747 Chenopodium quinoa HOM05D007176 ORTHO05D009050 9.6e-54 214.9 319 54.5
PSO541G4948 Papaver somniferum HOM05D007176 ORTHO05D009050 3.6e-53 213.0 288 62.5
Hma1.2p1_0645F.1_g194900 Hydrangea macrophylla HOM05D007176 ORTHO05D009050 8.1e-53 211.8 286 63.3
VMungo0720G0788 Vigna mungo HOM05D007176 ORTHO05D009050 8.1e-53 211.8 166 60.8
Ca_03573_v3 Cicer arietinum L. HOM05D007176 ORTHO05D009050 2.4e-52 210.3 350 54.3
Ah.13g075580 Amaranthus hybridus HOM05D007176 ORTHO05D009050 3.8e-50 203.0 283 58.3
unitig_736.g22301 Utricularia gibba HOM05D007176 ORTHO05D009050 1.3e-45 188.0 394 54.1
HPP92_010126 Vanilla planifolia HOM05D007176 ORTHO05D009050 1.9e-41 174.1 281 55.2
Phvul.007G261900 Phaseolus vulgaris HOM05D007176 ORTHO05D009050 7.1e-41 172.2 141 61.7
Psat6g088000 Pisum sativum HOM05D007176 ORTHO05D009050 1.6e-40 171.0 297 64.0
BcaC02g10014 Brassica carinata HOM05D007176 ORTHO05D009050 3.5e-40 169.9 296 52.0
AagrBONN_evm.TU.Sc2ySwM_228.1251 Anthoceros agrestis HOM05D007176 ORTHO05D009050 5.1e-39 166.0 344 52.0
SMO118G0524 Selaginella moellendorffii HOM05D007176 ORTHO05D009050 5.7e-38 162.5 340 42.1
SEGI_09769 Sequoiadendron giganteum HOM05D007176 ORTHO05D009050 5.3e-36 156.0 289 52.2
ATR0001G043 Amborella trichopoda HOM05D007176 ORTHO05D009050 6.9e-36 155.6 267 61.8
Atru.chr8.1185 Acer truncatum HOM05D007176 ORTHO05D009050 1.5e-35 154.5 142 56.3
BolC4t24963H Brassica oleracea HOM05D000032 ORTHO05D001620 2.9e-34 150.2 300 50.0
C04p33960 Brassica napus HOM05D007176 ORTHO05D009050 5.0e-34 149.4 300 50.3
Pp3c23_2930 Physcomitrium patens HOM05D007176 ORTHO05D009050 9.3e-33 145.2 341 39.9
arahy.Tifrunner.gnm1.ann1.0S64XP Arachis hypogaea HOM05D007176 ORTHO05D009050 2.3e-31 140.6 276 53.3
Hund24819 Selenicereus undatus HOM05D007176 ORTHO05D001610 3.2e-25 120.2 120 77.5
A04p02540 Brassica napus HOM05D000032 ORTHO05D001620 6.1e-24 115.9 277 37.2
Hund24823 Selenicereus undatus HOM05D007176 ORTHO05D009050 3.3e-22 110.2 229 32.3
HanXRQChr05g0140621 Helianthus annuus HOM05D007176 ORTHO05D009050 7.7e-19 99.0 215 40.9
HanXRQChr10g0316231 Helianthus annuus HOM05D007176 ORTHO05D009050 7.7e-19 99.0 215 40.9
PRCOL_00005880 Prasinoderma coloniale HOM05D007176 ORTHO05D009050 3.6e-16 90.1 273 26.7
Mapoly0209s0007 Marchantia polymorpha HOM05D007176 ORTHO05D009050 2.2e-10 70.9 124 33.9
AUR62028939 Chenopodium quinoa HOM05D003317 ORTHO05D003696 3.0e-07 60.5 177 24.3
PSO573G0021 Papaver somniferum HOM05D005998 ORTHO05D007664 5.7e-06 56.2 97 32.0


User provided reference genes

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