Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen05g033610 Solanum pennellii HOM05D007571 ORTHO05D009439 3.7e-61 238.0 120 100.0
Solyc05g150152.1 Solanum lycopersicum HOM05D007571 ORTHO05D009439 1.1e-60 236.5 120 99.2
CAN.G1433.5 Capsicum annuum HOM05D007571 ORTHO05D009439 3.9e-47 191.4 122 84.4
Nitab4.5_0000687g0180 Nicotiana tabacum HOM05D007571 ORTHO05D009439 4.3e-46 188.0 120 79.2
Nitab4.5_0017347g0020 Nicotiana tabacum HOM05D007571 ORTHO05D009439 4.8e-45 184.5 120 77.5
Peaxi162Scf00519g00423 Petunia axillaris HOM05D007571 ORTHO05D009439 3.0e-39 165.2 120 75.0
Cc02_g09420 Coffea canephora HOM05D007571 ORTHO05D009439 3.9e-31 138.3 105 66.7
vmacro19538 Vaccinium macrocarpon HOM05D007571 ORTHO05D009439 7.0e-28 127.5 85 72.9
CSS0048413 Camellia sinensis var. sinensis HOM05D007571 ORTHO05D009439 1.2e-27 126.7 89 71.9
Dinv15820 Davidia involucrata HOM05D007571 ORTHO05D009439 1.2e-27 126.7 92 68.5
Potri.001G292000 Populus trichocarpa HOM05D007571 ORTHO05D009439 4.5e-27 124.8 124 55.6
Haze_10272 Corylus avellana HOM05D007571 ORTHO05D009439 2.2e-26 122.5 113 60.2
Oeu024805.1 Olea europaea HOM05D007571 ORTHO05D009439 2.9e-26 122.1 108 60.2
QL11p029955 Quercus lobata HOM05D007571 ORTHO05D009439 6.5e-26 120.9 114 56.1
ECA238G3778 Erigeron canadensis HOM05D007571 ORTHO05D009439 1.1e-25 120.2 86 69.8
EL10Ac9g22184 Beta vulgaris HOM05D007571 ORTHO05D009439 2.5e-25 119.0 107 60.7
MD10G1108300 Malus domestica HOM05D007571 ORTHO05D009439 3.2e-25 118.6 114 55.3
Actinidia04391 Actinidia chinensis HOM05D007571 ORTHO05D009439 4.2e-25 118.2 92 66.3
TAR628G1270 Trochodendron aralioides HOM05D007571 ORTHO05D009439 5.5e-25 117.9 131 53.4
Thecc.02G118900 Theobroma cacao HOM05D007571 ORTHO05D009439 7.2e-25 117.5 86 69.8
Lsat_1_v5_gn_2_105800 Lactuca sativa HOM05D007571 ORTHO05D009439 9.4e-25 117.1 86 72.1
PGSC0003DMG400023397 Solanum tuberosum HOM05D007571 ORTHO05D009439 1.2e-24 116.7 59 98.3
GSVIVG01037807001 Vitis vinifera HOM05D007571 ORTHO05D009439 1.2e-24 116.7 116 58.6
Prupe.8G147200 Prunus persica HOM05D007571 ORTHO05D009439 1.6e-24 116.3 114 55.3
Glyma.10G256000 Glycine max HOM05D007571 ORTHO05D009439 2.7e-24 115.5 118 55.1
Ciclev10029547m.g Citrus clementina HOM05D007571 ORTHO05D009439 4.7e-24 114.8 123 53.7
FvH4_2g03581 Fragaria vesca HOM05D007571 ORTHO05D009439 4.7e-24 114.8 115 54.8
FAN20G2923 Fragaria x ananassa HOM05D007571 ORTHO05D009439 4.7e-24 114.8 115 54.8
Atru.chr5.2324 Acer truncatum HOM05D007571 ORTHO05D009439 6.1e-24 114.4 113 56.6
MSTRG.417 Avicennia marina HOM05D007571 ORTHO05D009439 6.1e-24 114.4 108 62.0
RcHm_v2.0_Chr6g0252541 Rosa chinensis HOM05D007571 ORTHO05D009439 6.1e-24 114.4 114 54.4
Lj5g0013426 Lotus japonicus HOM05D007571 ORTHO05D009439 1.8e-23 112.8 85 67.1
Actinidia27996 Actinidia chinensis HOM05D007571 ORTHO05D009439 3.0e-23 112.1 95 61.1
arahy.Tifrunner.gnm1.ann1.A1M8SQ Arachis hypogaea HOM05D007571 ORTHO05D009439 3.0e-23 112.1 86 64.0
arahy.Tifrunner.gnm1.ann1.I40GDJ Arachis hypogaea HOM05D007571 ORTHO05D009439 3.0e-23 112.1 86 64.0
CANSAT25G0272 Cannabis sativa HOM05D007571 ORTHO05D009439 4.0e-23 111.7 80 65.0
CANSAT25G2750 Cannabis sativa HOM05D007571 ORTHO05D009439 4.0e-23 111.7 80 65.0
DCAR_028375 Daucus carota HOM05D007571 ORTHO05D009439 5.2e-23 111.3 104 61.5
HanXRQChr02g0053531 Helianthus annuus HOM05D007571 ORTHO05D009439 5.2e-23 111.3 86 66.3
Nn6g34507 Nelumbo nucifera HOM05D007571 ORTHO05D009439 6.7e-23 110.9 78 67.9
Phvul.007G046800 Phaseolus vulgaris HOM05D007571 ORTHO05D009439 6.7e-23 110.9 103 57.3
COL.COLO4_32496 Corchorus olitorius HOM05D007571 ORTHO05D009439 8.8e-23 110.5 86 65.1
Lalb_Chr21g0308001 Lupinus albus HOM05D007571 ORTHO05D009439 1.2e-22 110.2 111 50.5
Rhsim05G0092500 Rhododendron simsii HOM05D007571 ORTHO05D009439 1.2e-22 110.2 86 62.8
TWI59G0511 Tripterygium wilfordii HOM05D007571 ORTHO05D009439 1.2e-22 110.2 115 49.6
Eucgr.G01203 Eucalyptus grandis HOM05D007571 ORTHO05D009439 1.5e-22 109.8 76 67.1
Duzib052G0547 Durio zibethinus HOM05D007571 ORTHO05D009439 2.0e-22 109.4 86 62.8
Gohir.A12G018900 Gossypium hirsutum HOM05D007571 ORTHO05D009439 4.4e-22 108.2 90 58.9
SalBow6G2573 Salvia bowleyana HOM05D007571 ORTHO05D009439 4.4e-22 108.2 99 60.6
PGR042G0328 Punica granatum HOM05D007571 ORTHO05D009439 5.7e-22 107.8 87 65.5
Gohir.D12G019350 Gossypium hirsutum HOM05D007571 ORTHO05D009439 9.7e-22 107.1 90 58.9
Sc05g0005590 Simmondsia chinensis HOM05D007571 ORTHO05D009439 9.7e-22 107.1 89 66.3
TPR.G21146 Trifolium pratense HOM05D007571 ORTHO05D009439 9.7e-22 107.1 112 50.9
Sabra16G0182000 Salix brachista HOM05D007571 ORTHO05D009439 2.2e-21 105.9 156 42.3
AUR62030860 Chenopodium quinoa HOM05D007571 ORTHO05D009439 2.8e-21 105.5 73 69.9
Thhalv10011862m.g Eutrema salsugineum HOM05D007571 ORTHO05D009439 2.8e-21 105.5 112 52.7
Hund06510 Selenicereus undatus HOM05D007571 ORTHO05D009439 2.8e-21 105.5 97 57.7
CDE04G1832 Ceratophyllum demersum HOM05D007571 ORTHO05D009439 3.7e-21 105.1 86 65.1
MELO3C018528.2 Cucumis melo HOM05D007571 ORTHO05D009439 4.8e-21 104.8 90 61.1
CsaV3_7G007730 Cucumis sativus L. HOM05D007571 ORTHO05D009439 4.8e-21 104.8 113 50.4
Ah.01g007010 Amaranthus hybridus HOM05D007571 ORTHO05D009439 8.3e-21 104.0 92 59.8
Migut.F01585 Erythranthe guttata HOM05D007571 ORTHO05D009439 1.4e-20 103.2 70 75.7
Sed0007395 Sechium edule HOM05D007571 ORTHO05D009439 1.8e-20 102.8 113 52.2
Medtr1g106075 Medicago truncatula HOM05D007571 ORTHO05D009439 5.3e-20 101.3 114 50.9
Os03g0731100 Oryza sativa ssp. japonica HOM05D007571 ORTHO05D009439 7.0e-20 100.9 111 53.2
PSO675G4064 Papaver somniferum HOM05D007571 ORTHO05D009439 9.1e-20 100.5 90 57.8
Aqoxy6G02559 Aquilegia oxysepala HOM05D007571 ORTHO05D009439 1.6e-19 99.8 82 63.4
Carub.0001s3916 Capsella rubella HOM05D007571 ORTHO05D009439 3.5e-19 98.6 107 53.3
PSO541G4064 Papaver somniferum HOM05D007571 ORTHO05D009439 3.5e-19 98.6 90 56.7
AT1G49975 Arabidopsis thaliana HOM05D007571 ORTHO05D009439 4.5e-19 98.2 112 50.0
AL1G57530 Arabidopsis lyrata HOM05D007571 ORTHO05D009439 5.9e-19 97.8 112 50.0
Sp1g36830 Schrenkiella parvula HOM05D007571 ORTHO05D009439 7.7e-19 97.4 112 49.1
THA.LOC104825387 Tarenaya hassleriana HOM05D007571 ORTHO05D009439 1.7e-18 96.3 86 60.5
Medtr3g008630 Medicago truncatula HOM05D007571 ORTHO05D009439 3.8e-18 95.1 114 48.2
MBI16_g39621_MAGBIO Magnolia biondii HOM05D007571 ORTHO05D009439 6.5e-18 94.4 88 58.0
MBI16_g43666_MAGBIO Magnolia biondii HOM05D007571 ORTHO05D009439 6.5e-18 94.4 88 58.0
CiPaw.05G019300 Carya illinoinensis HOM05D000470 ORTHO05D000348 1.5e-17 93.2 60 71.7
VMungo0720G0585 Vigna mungo HOM05D007571 ORTHO05D009439 2.5e-17 92.4 97 49.5
CARHR040010 Cardamine hirsuta HOM05D007571 ORTHO05D009439 3.2e-17 92.0 83 59.0
ClCG02G007100 Citrullus lanatus HOM05D007571 ORTHO05D009439 4.2e-17 91.7 69 68.1
BcaC08g43171 Brassica carinata HOM05D007571 ORTHO05D009439 5.5e-17 91.3 65 72.3
A06p03470 Brassica napus HOM05D007571 ORTHO05D009439 5.5e-17 91.3 65 72.3
C06p04720 Brassica napus HOM05D007571 ORTHO05D009439 5.5e-17 91.3 65 72.3
BraA06t23555Z Brassica rapa HOM05D007571 ORTHO05D009439 5.5e-17 91.3 65 72.3
SGA_v2.0_scaffold62G21311 Striga asiatica HOM05D007002 ORTHO05D008602 7.2e-17 90.9 58 79.3
BcaB07g33447 Brassica carinata HOM05D007571 ORTHO05D009439 1.2e-16 90.1 65 70.8
ATR0739G046 Amborella trichopoda HOM05D007571 ORTHO05D009439 2.1e-16 89.4 66 68.2
Zm00001eb056210 Zea mays HOM05D007571 ORTHO05D009439 2.7e-16 89.0 81 59.3
Gorai.008G019700 Gossypium raimondii HOM05D005832 ORTHO05D007117 4.7e-16 88.2 79 55.7
Gohir.D12G019400 Gossypium hirsutum HOM05D005832 ORTHO05D007117 2.3e-15 85.9 73 57.5
SEGI_38446 Sequoiadendron giganteum HOM05D007571 ORTHO05D009439 2.0e-14 82.8 79 53.2
CBR_g6736 Chara braunii HOM05D007571 ORTHO05D009439 3.7e-13 78.6 67 58.2
BolC6t35600H Brassica oleracea HOM05D007571 ORTHO05D009439 2.4e-12 75.9 94 50.0
AagrBONN_evm.TU.Sc2ySwM_228.3762 Anthoceros agrestis HOM05D007571 ORTHO05D009439 1.6e-11 73.2 66 51.5
SalBow6G2452 Salvia bowleyana HOM05D007571 ORTHO05D009439 2.3e-10 69.3 46 76.1
Pp3c17_8360 Physcomitrium patens HOM05D007571 ORTHO05D009439 6.1e-08 61.2 63 47.6


User provided reference genes

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