Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen05g031350 Solanum pennellii HOM05D005879 ORTHO05D007432 4.0e-193 677.9 351 100.0
Solyc05g052840.1 Solanum lycopersicum HOM05D005879 ORTHO05D007432 2.8e-186 655.2 345 98.6
PGSC0003DMG400027189 Solanum tuberosum HOM05D005879 ORTHO05D007432 8.2e-186 653.7 353 96.3
Nitab4.5_0009581g0010 Nicotiana tabacum HOM05D005879 ORTHO05D007432 4.8e-154 548.1 360 79.4
CAN.G151.26 Capsicum annuum HOM05D005879 ORTHO05D007432 4.7e-141 505.0 355 76.6
Peaxi162Scf00054g00186 Petunia axillaris HOM05D005879 ORTHO05D007432 1.2e-136 490.3 363 75.2
Dinv21896 Davidia involucrata HOM05D005879 ORTHO05D007432 7.6e-115 417.9 349 64.8
Cc07_g15080 Coffea canephora HOM05D005879 ORTHO05D007432 6.0e-112 408.3 343 65.9
Migut.L00135 Erythranthe guttata HOM05D005879 ORTHO05D007432 2.8e-109 399.4 342 62.3
Hma1.2p1_0308F.1_g120270 Hydrangea macrophylla HOM05D005879 ORTHO05D007432 2.8e-109 399.4 351 64.7
SGA_v2.0_scaffold115G32189 Striga asiatica HOM05D005879 ORTHO05D007432 4.0e-108 395.6 351 62.7
MSTRG.3773 Avicennia marina HOM05D005879 ORTHO05D007432 8.9e-108 394.4 354 62.1
SGA_v2.0_scaffold334G49051 Striga asiatica HOM05D005879 ORTHO05D007432 2.0e-107 393.3 354 62.4
Nn2g14007 Nelumbo nucifera HOM05D005879 ORTHO05D007432 4.2e-105 385.6 359 57.9
Cfa017077 Carpinus fangiana HOM05D005879 ORTHO05D007432 2.7e-104 382.9 354 58.2
TAR381G0927 Trochodendron aralioides HOM05D005879 ORTHO05D007432 7.8e-104 381.3 359 57.9
PSO339G2019 Papaver somniferum HOM05D005879 ORTHO05D007432 1.3e-103 380.6 357 58.3
Sc05g0001510 Simmondsia chinensis HOM05D005879 ORTHO05D007432 3.0e-103 379.4 333 61.6
Haze_24910 Corylus avellana HOM05D005879 ORTHO05D007432 1.1e-102 377.5 332 61.7
Haze_24914 Corylus avellana HOM05D005879 ORTHO05D007432 1.1e-102 377.5 332 61.7
Gohir.A11G202400 Gossypium hirsutum HOM05D005879 ORTHO05D007432 1.1e-102 377.5 358 61.7
Oeu032409.1 Olea europaea HOM05D005879 ORTHO05D007432 1.5e-102 377.1 335 62.7
PSO801G0022 Papaver somniferum HOM05D005879 ORTHO05D007432 1.5e-102 377.1 358 57.5
HanXRQChr17g0554861 Helianthus annuus HOM05D005879 ORTHO05D007432 4.3e-102 375.6 344 58.7
TWI77G0137 Tripterygium wilfordii HOM05D005879 ORTHO05D007432 4.3e-102 375.6 337 60.8
CsaV3_4G004590 Cucumis sativus L. HOM05D005879 ORTHO05D007432 3.6e-101 372.5 360 57.2
CsaV3_UNG120970 Cucumis sativus L. HOM05D005879 ORTHO05D007432 3.6e-101 372.5 360 57.2
CsaV3_UNG160200 Cucumis sativus L. HOM05D005879 ORTHO05D007432 3.6e-101 372.5 360 57.2
CsaV3_UNG223580 Cucumis sativus L. HOM05D005879 ORTHO05D007432 3.6e-101 372.5 360 57.2
RcHm_v2.0_Chr2g0113151 Rosa chinensis HOM05D005879 ORTHO05D007432 3.6e-101 372.5 356 58.1
CiPaw.03G142700 Carya illinoinensis HOM05D005879 ORTHO05D007432 4.8e-101 372.1 333 63.1
QL06p049237 Quercus lobata HOM05D005879 ORTHO05D007432 8.1e-101 371.3 359 58.8
Rhsim01G0133800 Rhododendron simsii HOM05D005879 ORTHO05D007432 1.4e-100 370.5 377 56.2
RhsimUnG0233600 Rhododendron simsii HOM05D005879 ORTHO05D007432 1.4e-100 370.5 377 56.2
DCAR_003483 Daucus carota HOM05D005879 ORTHO05D007432 1.8e-100 370.2 336 59.2
MD05G1043000 Malus domestica HOM05D005879 ORTHO05D007432 3.1e-100 369.4 338 59.8
Gohir.D11G220800 Gossypium hirsutum HOM05D005879 ORTHO05D007432 4.0e-100 369.0 350 61.4
unitig_32.g10701 Utricularia gibba HOM05D005879 ORTHO05D007432 4.0e-100 369.0 351 58.4
Lalb_Chr06g0163471 Lupinus albus HOM05D005879 ORTHO05D007432 5.3e-100 368.6 348 59.5
vmacro12962 Vaccinium macrocarpon HOM05D005879 ORTHO05D007432 5.3e-100 368.6 372 55.4
ClCG07G017360 Citrullus lanatus HOM05D005879 ORTHO05D007432 1.5e-99 367.1 360 57.5
FAN26G1261 Fragaria x ananassa HOM05D005879 ORTHO05D007432 1.5e-99 367.1 337 58.5
FvH4_1g20700 Fragaria vesca HOM05D005879 ORTHO05D007432 2.0e-99 366.7 338 58.6
Ciclev10020973m.g Citrus clementina HOM05D005879 ORTHO05D007432 2.6e-99 366.3 337 60.2
Prupe.6G188100 Prunus persica HOM05D005879 ORTHO05D007432 2.6e-99 366.3 340 59.4
THA.LOC104807688 Tarenaya hassleriana HOM05D005879 ORTHO05D007432 2.6e-99 366.3 351 57.3
Aqoxy3G00238 Aquilegia oxysepala HOM05D005879 ORTHO05D007432 5.8e-99 365.2 356 57.3
Gorai.007G237000 Gossypium raimondii HOM05D005879 ORTHO05D007432 5.8e-99 365.2 350 60.9
MELO3C017607.2 Cucumis melo HOM05D005879 ORTHO05D007432 9.9e-99 364.4 346 58.4
Ah.11g050680 Amaranthus hybridus HOM05D005879 ORTHO05D007432 2.2e-98 363.2 357 54.9
ECA233G0618 Erigeron canadensis HOM05D005879 ORTHO05D007432 2.2e-98 363.2 331 57.4
Cpa.g.sc615.1 Carica papaya HOM05D005879 ORTHO05D007432 3.8e-98 362.5 333 60.7
Eucgr.B03900 Eucalyptus grandis HOM05D005879 ORTHO05D007432 4.9e-98 362.1 345 60.0
Lsat_1_v5_gn_8_137181 Lactuca sativa HOM05D005879 ORTHO05D007432 6.4e-98 361.7 331 58.3
Manes.12G134100 Manihot esculenta HOM05D005879 ORTHO05D007432 8.4e-98 361.3 331 57.7
EL10Ac5g10569 Beta vulgaris HOM05D005879 ORTHO05D007432 1.1e-97 360.9 350 55.7
arahy.Tifrunner.gnm1.ann1.Y76I0L Arachis hypogaea HOM05D005879 ORTHO05D007432 1.9e-97 360.1 339 59.3
Sed0022481 Sechium edule HOM05D005879 ORTHO05D007432 1.9e-97 360.1 336 58.3
CARHR246770 Cardamine hirsuta HOM05D005879 ORTHO05D007432 2.4e-97 359.8 351 57.0
TWI81G0999 Tripterygium wilfordii HOM05D005879 ORTHO05D007432 5.4e-97 358.6 337 59.3
Medtr8g090180 Medicago truncatula HOM05D005879 ORTHO05D007432 1.6e-96 357.1 338 57.4
Ca_17743_v3 Cicer arietinum L. HOM05D005879 ORTHO05D007432 2.1e-96 356.7 346 57.5
Lj4g0026645 Lotus japonicus HOM05D005879 ORTHO05D007432 2.1e-96 356.7 341 58.1
Glyma.08G134800 Glycine max HOM05D005879 ORTHO05D007432 2.7e-96 356.3 327 59.6
Potri.005G074700 Populus trichocarpa HOM05D005879 ORTHO05D007432 6.0e-96 355.1 337 57.6
VMungo0251G0721 Vigna mungo HOM05D005879 ORTHO05D007432 7.8e-96 354.8 332 59.3
AL7G12180 Arabidopsis lyrata HOM05D005879 ORTHO05D007432 1.0e-95 354.4 351 55.3
Sabra05G0061500 Salix brachista HOM05D005879 ORTHO05D007432 1.0e-95 354.4 343 56.9
AUR62028624 Chenopodium quinoa HOM05D005879 ORTHO05D007432 1.7e-95 353.6 333 55.9
Carub.0007s0187 Capsella rubella HOM05D005879 ORTHO05D007432 3.9e-95 352.4 353 55.5
PSO170G2230 Papaver somniferum HOM05D005879 ORTHO05D007432 8.7e-95 351.3 333 57.4
Atru.chr7.1487 Acer truncatum HOM05D005879 ORTHO05D007432 1.9e-94 350.1 333 57.7
AUR62008049 Chenopodium quinoa HOM05D005879 ORTHO05D007432 3.3e-94 349.4 333 55.3
TPR.G6200 Trifolium pratense HOM05D005879 ORTHO05D007432 2.1e-93 346.7 371 55.0
Aa31LG6G15340 Aethionema arabicum HOM05D005879 ORTHO05D007432 2.8e-93 346.3 351 54.1
arahy.Tifrunner.gnm1.ann1.F9QSZL Arachis hypogaea HOM05D005879 ORTHO05D007432 4.8e-93 345.5 349 56.4
AT4G39920 Arabidopsis thaliana HOM05D005879 ORTHO05D007432 8.1e-93 344.7 344 54.1
Phvul.002G256800 Phaseolus vulgaris HOM05D005879 ORTHO05D007432 1.8e-92 343.6 332 58.1
MBI05_g37046_MAGBIO Magnolia biondii HOM05D005879 ORTHO05D007432 5.3e-92 342.0 348 54.3
COL.COLO4_27255 Corchorus olitorius HOM05D005879 ORTHO05D007432 6.9e-92 341.7 317 59.6
Glyma.05G177800 Glycine max HOM05D005879 ORTHO05D007432 6.9e-92 341.7 331 58.0
Sp7g35960 Schrenkiella parvula HOM05D005879 ORTHO05D007432 2.0e-91 340.1 349 52.7
ATR0584G053 Amborella trichopoda HOM05D005879 ORTHO05D007432 9.9e-91 337.8 348 52.6
Thhalv10025595m.g Eutrema salsugineum HOM05D005879 ORTHO05D007432 2.2e-90 336.7 349 54.7
A03p65800 Brassica napus HOM05D005879 ORTHO05D007432 3.2e-89 332.8 349 52.7
BraA03t15633Z Brassica rapa HOM05D005879 ORTHO05D007432 3.2e-89 332.8 349 52.7
SalBow7G4497 Salvia bowleyana HOM05D005879 ORTHO05D007432 4.2e-89 332.4 333 55.9
BolC7t46692H Brassica oleracea HOM05D005879 ORTHO05D007432 1.3e-87 327.4 347 52.4
Duzib147G1529 Durio zibethinus HOM05D005879 ORTHO05D007432 3.3e-86 322.8 357 53.2
vmacro17311 Vaccinium macrocarpon HOM05D005879 ORTHO05D007432 8.1e-85 318.2 325 53.5
C07p62780 Brassica napus HOM05D005879 ORTHO05D007432 3.1e-84 316.2 350 51.4
Thecc.01G100600 Theobroma cacao HOM05D005879 ORTHO05D007432 2.0e-83 313.5 351 51.9
FAN19G0980 Fragaria x ananassa HOM05D005879 ORTHO05D007432 7.6e-83 311.6 330 52.7
CDE04G0616 Ceratophyllum demersum HOM05D005879 ORTHO05D007432 1.0e-79 301.2 331 49.2
PGR102G2441 Punica granatum HOM05D005879 ORTHO05D007432 3.9e-79 299.3 334 52.1
Os02g0557000 Oryza sativa ssp. japonica HOM05D005879 ORTHO05D007432 1.4e-76 290.8 345 50.4
HPP92_013925 Vanilla planifolia HOM05D005879 ORTHO05D007432 1.5e-75 287.3 361 46.8
Zm00001eb243870 Zea mays HOM05D005879 ORTHO05D007432 2.6e-75 286.6 349 47.3
Hma1.2p1_0308F.1_g120280 Hydrangea macrophylla HOM05D005879 ORTHO05D007432 7.4e-70 268.5 194 71.6
VMungo0540G1211 Vigna mungo HOM05D005879 ORTHO05D007432 1.9e-65 253.8 209 62.2
SMO143G0283 Selaginella moellendorffii HOM05D005879 ORTHO05D007432 7.9e-64 248.4 336 42.6
AagrBONN_evm.TU.Sc2ySwM_117.1918 Anthoceros agrestis HOM05D005879 ORTHO05D007432 3.0e-63 246.5 344 41.3
Pp3c13_2250 Physcomitrium patens HOM05D005879 ORTHO05D007432 9.7e-62 241.5 339 42.8
Atru.chr11.1549 Acer truncatum HOM05D005879 ORTHO05D007432 1.4e-60 237.7 180 63.9
Mapoly0002s0046 Marchantia polymorpha HOM05D005879 ORTHO05D007432 1.3e-58 231.1 350 40.6
FAN23G0004 Fragaria x ananassa HOM05D005879 ORTHO05D007432 2.7e-56 223.4 132 79.5
arahy.Tifrunner.gnm1.ann1.DH96WI Arachis hypogaea HOM05D005879 ORTHO05D007432 5.1e-55 219.2 304 45.7
Psat7g055120 Pisum sativum HOM05D005879 ORTHO05D007432 9.1e-52 208.4 329 42.9
SEGI_25682 Sequoiadendron giganteum HOM05D005879 ORTHO05D007432 9.1e-52 208.4 210 53.8
CBR_g8978 Chara braunii HOM05D006002 ORTHO05D007651 3.2e-49 199.9 377 35.0
Atru.chr7.1491 Acer truncatum HOM05D005879 ORTHO05D007432 2.7e-48 196.8 247 48.2
MD01G1031400 Malus domestica HOM05D005879 ORTHO05D007432 1.0e-47 194.9 129 71.3
Potri.007G093800 Populus trichocarpa HOM05D005879 ORTHO05D007432 1.5e-46 191.0 344 38.4
C03p78540 Brassica napus HOM05D005879 ORTHO05D007432 1.1e-44 184.9 323 40.9
Actinidia28237 Actinidia chinensis HOM05D005879 ORTHO05D007432 5.0e-42 176.0 322 38.8
MCO11G662 Micromonas commoda HOM05D005879 ORTHO05D007432 2.3e-39 167.2 357 32.8
BolC3t20106H Brassica oleracea HOM05D005879 ORTHO05D007432 1.8e-36 157.5 321 37.7
BcaB03g12293 Brassica carinata HOM05D005879 ORTHO05D007432 7.7e-35 152.1 211 47.4
PRCOL_00003435 Prasinoderma coloniale HOM05D005879 ORTHO05D007432 2.9e-34 150.2 344 32.8
HPP92_014012 Vanilla planifolia HOM05D005879 ORTHO05D007432 2.1e-32 144.1 258 39.9
Migut.L00117 Erythranthe guttata HOM05D005879 ORTHO05D007432 2.6e-30 137.1 86 75.6
Cre03.g200150 Chlamydomonas reinhardtii HOM05D005879 ORTHO05D007432 2.7e-27 127.1 329 27.7
GSVIVG01004856001 Vitis vinifera HOM05D005879 ORTHO05D007432 3.5e-27 126.7 148 52.0
MBI15_g14577_MAGBIO Magnolia biondii HOM05D005879 ORTHO05D007432 7.2e-25 119.0 85 63.5
BcaNung02300 Brassica carinata HOM05D005879 ORTHO05D007432 1.8e-23 114.4 151 47.0
BraA08t34278Z Brassica rapa HOM05D005879 ORTHO05D007432 6.4e-21 105.9 62 77.4
Hma1.2p1_0297F.1_g117050 Hydrangea macrophylla HOM05D005879 ORTHO05D007432 1.7e-18 97.8 99 54.5
SEGI_41531 Sequoiadendron giganteum HOM05D005879 ORTHO05D007432 3.3e-17 93.6 139 41.7
PRCOL_00004923 Prasinoderma coloniale HOM05D005879 ORTHO05D034414 7.3e-17 92.4 134 33.6
A08p23210 Brassica napus HOM05D005879 ORTHO05D007432 3.1e-15 87.0 60 66.7
BcaC01g00330 Brassica carinata HOM05D005879 ORTHO05D007432 3.3e-09 67.0 130 39.2
Cfa025806 Carpinus fangiana HOM05D005879 ORTHO05D123935 1.1e-07 62.0 110 30.0
Pp3c4_21480 Physcomitrium patens HOM05D005879 ORTHO05D007432 1.2e-06 58.5 58 55.2
MCO14G569 Micromonas commoda HOM05D033910 ORTHO05D034414 4.4e-06 56.6 189 22.2


User provided reference genes

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