Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen05g031230 Solanum pennellii HOM05D007113 ORTHO05D008859 2.3e-58 228.8 122 100.0
Solyc05g052710.3 Solanum lycopersicum HOM05D007113 ORTHO05D008859 2.5e-57 225.3 122 97.5
PGSC0003DMG400027129 Solanum tuberosum HOM05D007113 ORTHO05D008859 3.6e-56 221.5 122 97.5
CAN.G503.7 Capsicum annuum HOM05D007113 ORTHO05D008859 3.2e-44 181.8 122 82.0
Nitab4.5_0000802g0080 Nicotiana tabacum HOM05D007113 ORTHO05D008859 1.1e-41 173.3 120 80.0
Nitab4.5_0008493g0040 Nicotiana tabacum HOM05D007113 ORTHO05D008859 1.6e-40 169.5 120 78.3
Peaxi162Scf00957g00229 Petunia axillaris HOM05D011221 ORTHO05D013370 1.8e-39 166.0 112 83.9
Nitab4.5_0004338g0130 Nicotiana tabacum HOM05D007113 ORTHO05D008859 2.7e-35 152.1 118 75.4
Eucgr.K02991 Eucalyptus grandis HOM05D007113 ORTHO05D008859 8.9e-31 137.1 120 60.8
Nn8g40109 Nelumbo nucifera HOM05D007113 ORTHO05D008859 1.7e-29 132.9 120 60.0
Dinv34405 Davidia involucrata HOM05D007113 ORTHO05D008859 6.4e-29 131.0 121 65.3
CSS0048161 Camellia sinensis var. sinensis HOM05D007113 ORTHO05D008859 1.4e-28 129.8 123 62.6
CDE03G0108 Ceratophyllum demersum HOM05D007113 ORTHO05D008859 7.1e-28 127.5 120 60.8
HanXRQChr14g0460151 Helianthus annuus HOM05D007113 ORTHO05D008859 9.3e-28 127.1 108 66.7
Lsat_1_v5_gn_2_121221 Lactuca sativa HOM05D007113 ORTHO05D008859 2.7e-27 125.6 113 66.4
THA.LOC104805827 Tarenaya hassleriana HOM05D007113 ORTHO05D008859 2.7e-27 125.6 121 57.0
FAN09G0121 Fragaria x ananassa HOM05D007113 ORTHO05D008859 3.5e-27 125.2 120 57.5
Lsat_1_v5_gn_9_63261 Lactuca sativa HOM05D007113 ORTHO05D008859 3.5e-27 125.2 108 65.7
Migut.F01372 Erythranthe guttata HOM05D007113 ORTHO05D008859 4.6e-27 124.8 120 61.7
FAN14G1367 Fragaria x ananassa HOM05D007113 ORTHO05D008859 4.6e-27 124.8 120 57.5
PGR004G1045 Punica granatum HOM05D007113 ORTHO05D008859 6.0e-27 124.4 121 59.5
FAN05G2893 Fragaria x ananassa HOM05D007113 ORTHO05D008859 7.8e-27 124.0 120 57.5
FvH4_6g11730 Fragaria vesca HOM05D007113 ORTHO05D008859 1.0e-26 123.6 120 57.5
CDE04G2391 Ceratophyllum demersum HOM05D007113 ORTHO05D008859 1.7e-26 122.9 120 56.7
DCAR_028817 Daucus carota HOM05D007113 ORTHO05D008859 2.3e-26 122.5 120 58.3
ECA238G3418 Erigeron canadensis HOM05D007113 ORTHO05D008859 3.0e-26 122.1 115 60.9
Oeu028599.1 Olea europaea HOM05D007113 ORTHO05D008859 3.0e-26 122.1 121 60.3
Cc02_g06720 Coffea canephora HOM05D007113 ORTHO05D008859 6.6e-26 120.9 120 58.3
MD04G1149600 Malus domestica HOM05D007113 ORTHO05D008859 1.5e-25 119.8 120 56.7
arahy.Tifrunner.gnm1.ann1.J29A80 Arachis hypogaea HOM05D007113 ORTHO05D008859 1.9e-25 119.4 120 55.8
Gohir.D01G216000 Gossypium hirsutum HOM05D007113 ORTHO05D008859 1.9e-25 119.4 120 52.5
RcHm_v2.0_Chr3g0463511 Rosa chinensis HOM05D007113 ORTHO05D008859 2.5e-25 119.0 120 55.0
vmacro06980 Vaccinium macrocarpon HOM05D007113 ORTHO05D008859 3.3e-25 118.6 120 60.8
Hma1.2p1_0362F.1_g136060 Hydrangea macrophylla HOM05D007113 ORTHO05D008859 5.6e-25 117.9 120 56.7
TWI74G0516 Tripterygium wilfordii HOM05D007113 ORTHO05D008859 5.6e-25 117.9 121 55.4
Gorai.002G262200 Gossypium raimondii HOM05D007113 ORTHO05D008859 7.3e-25 117.5 120 51.7
Atru.chr8.2216 Acer truncatum HOM05D007113 ORTHO05D008859 9.6e-25 117.1 120 54.2
Sc11g0007190 Simmondsia chinensis HOM05D007113 ORTHO05D008859 9.6e-25 117.1 117 57.3
Gohir.A01G226400 Gossypium hirsutum HOM05D007113 ORTHO05D008859 1.3e-24 116.7 120 50.8
Aa31sc189G20 Aethionema arabicum HOM05D007113 ORTHO05D008859 1.6e-24 116.3 120 54.2
Ciclev10013049m.g Citrus clementina HOM05D007113 ORTHO05D008859 1.6e-24 116.3 120 55.0
TWI77G0060 Tripterygium wilfordii HOM05D007113 ORTHO05D008859 1.6e-24 116.3 120 53.3
GSVIVG01033979001 Vitis vinifera HOM05D007113 ORTHO05D008859 2.1e-24 115.9 120 55.0
Haze_20976 Corylus avellana HOM05D007113 ORTHO05D008859 2.8e-24 115.5 120 55.0
C04p09540 Brassica napus HOM05D007113 ORTHO05D008859 3.6e-24 115.2 120 54.2
BolC4t22560H Brassica oleracea HOM05D007113 ORTHO05D008859 3.6e-24 115.2 120 54.2
Glyma.03G063200 Glycine max HOM05D007113 ORTHO05D008859 3.6e-24 115.2 120 58.3
MD12G1164000 Malus domestica HOM05D007113 ORTHO05D008859 3.6e-24 115.2 120 54.2
ATR0618G049 Amborella trichopoda HOM05D007113 ORTHO05D008859 4.8e-24 114.8 124 54.8
AT2G38140 Arabidopsis thaliana HOM05D007113 ORTHO05D008859 4.8e-24 114.8 120 53.3
SalBow6G1146 Salvia bowleyana HOM05D007113 ORTHO05D008859 4.8e-24 114.8 122 56.6
unitig_62.g23930 Utricularia gibba HOM05D000230 ORTHO05D000176 6.2e-24 114.4 120 55.0
BraA05t19755Z Brassica rapa HOM05D007113 ORTHO05D008859 1.4e-23 113.2 120 53.3
CARHR132730 Cardamine hirsuta HOM05D007113 ORTHO05D008859 1.4e-23 113.2 120 52.5
CANSAT35G0395 Cannabis sativa HOM05D007113 ORTHO05D008859 1.8e-23 112.8 120 52.5
Phvul.010G003200 Phaseolus vulgaris HOM05D007113 ORTHO05D008859 1.8e-23 112.8 121 55.4
Phvul.004G171400 Phaseolus vulgaris HOM05D007113 ORTHO05D008859 3.1e-23 112.1 120 57.5
A05p07890 Brassica napus HOM05D007113 ORTHO05D008859 4.0e-23 111.7 120 54.2
TAR623G1648 Trochodendron aralioides HOM05D007113 ORTHO05D008859 4.0e-23 111.7 108 62.0
COL.COLO4_14561 Corchorus olitorius HOM05D007113 ORTHO05D008859 9.0e-23 110.5 120 54.2
Lj3g0022517 Lotus japonicus HOM05D007113 ORTHO05D008859 1.5e-22 109.8 122 53.3
Aqoxy4G02617 Aquilegia oxysepala HOM05D007113 ORTHO05D008859 2.6e-22 109.0 120 48.3
HPP92_019871 Vanilla planifolia HOM05D007113 ORTHO05D008859 3.4e-22 108.6 121 52.1
VMungo1127G1807 Vigna mungo HOM05D007113 ORTHO05D008859 9.9e-22 107.1 119 55.5
Hund23901 Selenicereus undatus HOM05D007113 ORTHO05D008859 1.3e-21 106.7 109 59.6
Thecc.05G019300 Theobroma cacao HOM05D007113 ORTHO05D008859 2.2e-21 105.9 120 50.0
MELO3C003245.2 Cucumis melo HOM05D007113 ORTHO05D008859 2.9e-21 105.5 120 50.0
FAN02G3283 Fragaria x ananassa HOM05D008730 ORTHO05D008859 2.9e-21 105.5 117 52.1
ClCG04G007070 Citrullus lanatus HOM05D007113 ORTHO05D008859 3.8e-21 105.1 118 50.8
PSO339G1456 Papaver somniferum HOM05D007113 ORTHO05D008859 3.8e-21 105.1 123 52.8
EL10Ac2g04810 Beta vulgaris HOM05D007113 ORTHO05D008859 4.9e-21 104.8 111 61.3
CsaV3_4G026180 Cucumis sativus L. HOM05D007113 ORTHO05D008859 6.4e-21 104.4 116 49.1
Rhsim03G0141800 Rhododendron simsii HOM05D007113 ORTHO05D008859 6.4e-21 104.4 142 49.3
Lsat_1_v5_gn_9_63281 Lactuca sativa HOM05D005832 ORTHO05D007117 1.1e-20 103.6 111 57.7
Medtr4g015540 Medicago truncatula HOM05D007113 ORTHO05D008859 1.1e-20 103.6 119 53.8
arahy.Tifrunner.gnm1.ann1.62SCQ6 Arachis hypogaea HOM05D007113 ORTHO05D008859 1.4e-20 103.2 120 51.7
Lalb_Chr07g0193491 Lupinus albus HOM05D007113 ORTHO05D008859 1.9e-20 102.8 63 73.0
PSO384G2929 Papaver somniferum HOM05D007113 ORTHO05D008859 1.9e-20 102.8 123 52.0
FAN14G0869 Fragaria x ananassa HOM05D008730 ORTHO05D010922 3.2e-20 102.1 117 51.3
Glyma.01G114800 Glycine max HOM05D007113 ORTHO05D008859 4.2e-20 101.7 120 53.3
Oeu025646.1 Olea europaea HOM05D007113 ORTHO05D008859 5.4e-20 101.3 67 73.1
Potri.016G113700 Populus trichocarpa HOM05D007113 ORTHO05D008859 5.4e-20 101.3 120 50.8
Haze_17209 Corylus avellana HOM05D007113 ORTHO05D008859 7.1e-20 100.9 110 57.3
Duzib093G1147 Durio zibethinus HOM05D007113 ORTHO05D008859 7.1e-20 100.9 120 49.2
Cfa017230 Carpinus fangiana HOM05D007113 ORTHO05D008859 1.6e-19 99.8 120 48.3
Psat7g246120 Pisum sativum HOM05D007113 ORTHO05D008859 2.1e-19 99.4 120 52.5
SGA_v2.0_scaffold78G25464 Striga asiatica HOM05D007113 ORTHO05D008859 2.7e-19 99.0 116 55.2
Manes.08G090600 Manihot esculenta HOM05D007113 ORTHO05D008859 7.9e-19 97.4 120 50.8
Sed0004762 Sechium edule HOM05D007113 ORTHO05D008859 7.9e-19 97.4 105 50.5
Ah.16g103370 Amaranthus hybridus HOM05D007113 ORTHO05D008859 3.0e-18 95.5 107 56.1
Zm00001eb144250 Zea mays HOM05D007113 ORTHO05D008859 5.1e-18 94.7 126 46.0
Actinidia29691 Actinidia chinensis HOM05D007113 ORTHO05D008859 1.1e-17 93.6 121 49.6
CiPaw.10G155700 Carya illinoinensis HOM05D007113 ORTHO05D008859 1.5e-17 93.2 122 47.5
Os05g0186000 Oryza sativa ssp. japonica HOM05D007113 ORTHO05D008859 1.9e-17 92.8 120 45.8
Sp4g20460 Schrenkiella parvula HOM05D007113 ORTHO05D008859 2.5e-17 92.4 120 46.7
SEGI_10938 Sequoiadendron giganteum HOM05D007113 ORTHO05D008859 9.6e-17 90.5 64 67.2
SEGI_38672 Sequoiadendron giganteum HOM05D007113 ORTHO05D008859 9.6e-17 90.5 64 67.2
TWI53G1153 Tripterygium wilfordii HOM05D007113 ORTHO05D008859 9.6e-17 90.5 84 57.1
Ca_20298_v3 Cicer arietinum L. HOM05D007113 ORTHO05D008859 2.8e-16 89.0 110 52.7
SGA_v2.0_scaffold20G09268 Striga asiatica HOM05D007113 ORTHO05D008859 6.2e-16 87.8 113 47.8
TPR.G13351 Trifolium pratense HOM05D007113 ORTHO05D008859 8.1e-16 87.4 121 47.1
AL4G35140 Arabidopsis lyrata HOM05D007113 ORTHO05D008859 1.2e-14 83.6 120 43.3
Thhalv10017376m.g Eutrema salsugineum HOM05D007113 ORTHO05D008859 1.5e-14 83.2 120 45.0
QL08p062975 Quercus lobata HOM05D007113 ORTHO05D008859 1.5e-14 83.2 117 46.2
Carub.0004s2011 Capsella rubella HOM05D007113 ORTHO05D008859 2.6e-14 82.4 120 43.3
arahy.Tifrunner.gnm1.ann1.C0BXE8 Arachis hypogaea HOM05D007113 ORTHO05D008859 6.4e-13 77.8 96 53.1
Mapoly0005s0194 Marchantia polymorpha HOM05D007113 ORTHO05D008859 4.2e-12 75.1 103 44.7
arahy.Tifrunner.gnm1.ann1.CDY6H8 Arachis hypogaea HOM05D007113 ORTHO05D008859 1.2e-11 73.6 96 52.1
AagrBONN_evm.TU.Sc2ySwM_362.1890 Anthoceros agrestis HOM05D007113 ORTHO05D008859 3.9e-10 68.6 111 40.5
Peaxi162Scf01313g00026 Petunia axillaris HOM05D007113 ORTHO05D008859 1.3e-08 63.5 31 96.8
Sabra16G0109100 Salix brachista HOM05D007113 ORTHO05D008859 5.3e-07 58.2 120 44.2
Pp3c15_12810 Physcomitrium patens HOM05D007113 ORTHO05D008859 6.9e-07 57.8 65 46.2
Prupe.6G274500 Prunus persica HOM05D007113 ORTHO05D008859 1.2e-06 57.0 89 41.6
Pp3c9_12290 Physcomitrium patens HOM05D007113 ORTHO05D008859 3.4e-06 55.5 94 40.4


User provided reference genes

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