Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen05g030830 Solanum pennellii HOM05D002277 ORTHO05D001770 1.3e-99 366.7 221 100.0
PGSC0003DMG400011651 Solanum tuberosum HOM05D002277 ORTHO05D001770 2.4e-90 335.9 227 91.6
Peaxi162Scf00167g00134 Petunia axillaris HOM05D002277 ORTHO05D001770 1.5e-44 183.7 224 62.1
Nitab4.5_0000263g0230 Nicotiana tabacum HOM05D002277 ORTHO05D001770 2.0e-33 146.7 205 52.2
Nitab4.5_0004650g0010 Nicotiana tabacum HOM05D002277 ORTHO05D001770 2.5e-31 139.8 204 50.5
Peaxi162Scf00464g00005 Petunia axillaris HOM05D002277 ORTHO05D001770 1.1e-21 107.8 181 49.2
PGSC0003DMG400029071 Solanum tuberosum HOM05D002277 ORTHO05D001770 1.4e-13 80.9 164 43.9
Cc02_g05610 Coffea canephora HOM05D002277 ORTHO05D001770 2.3e-13 80.1 203 36.9
Oeu058656.1 Olea europaea HOM05D002277 ORTHO05D001770 2.0e-12 77.0 217 35.9
Solyc06g050370.1 Solanum lycopersicum HOM05D002277 ORTHO05D001770 1.3e-11 74.3 162 38.9
MSTRG.8902 Avicennia marina HOM05D002277 ORTHO05D001770 6.4e-11 72.0 198 38.4
Sopen06g015870 Solanum pennellii HOM05D002277 ORTHO05D001770 8.4e-11 71.6 162 38.3
TAR636G1485 Trochodendron aralioides HOM05D002277 ORTHO05D001770 2.1e-09 67.0 218 35.3
Duzib128G0618 Durio zibethinus HOM05D002277 ORTHO05D001770 3.5e-09 66.2 235 34.0
PSO384G4841 Papaver somniferum HOM05D002277 ORTHO05D001770 3.5e-09 66.2 124 38.7
TAR629G0672 Trochodendron aralioides HOM05D002277 ORTHO05D001770 3.5e-09 66.2 218 35.3
Medtr4g029130 Medicago truncatula HOM05D002277 ORTHO05D001770 4.6e-09 65.9 200 33.0
Actinidia29050 Actinidia chinensis HOM05D002277 ORTHO05D001770 6.0e-09 65.5 208 35.1
CiPaw.09G218200 Carya illinoinensis HOM05D002277 ORTHO05D001770 6.0e-09 65.5 132 38.6
Rhsim09G0183700 Rhododendron simsii HOM05D002277 ORTHO05D001770 6.0e-09 65.5 187 36.9
HanXRQChr11g0337191 Helianthus annuus HOM05D002277 ORTHO05D001770 7.8e-09 65.1 129 33.3
Hma1.2p1_1052F.1_g252370 Hydrangea macrophylla HOM05D002277 ORTHO05D001770 7.8e-09 65.1 199 32.7
COL.COLO4_30002 Corchorus olitorius HOM05D002277 ORTHO05D001770 1.0e-08 64.7 67 53.7
Glyma.03G037600 Glycine max HOM05D002277 ORTHO05D001770 1.7e-08 63.9 67 53.7
MSTRG.5517 Avicennia marina HOM05D002277 ORTHO05D001770 2.3e-08 63.5 207 31.4
Manes.08G172400 Manihot esculenta HOM05D002277 ORTHO05D001770 2.3e-08 63.5 176 36.4
Manes.09G115500 Manihot esculenta HOM05D002277 ORTHO05D001770 2.3e-08 63.5 178 37.1
Potri.006G107200 Populus trichocarpa HOM05D002277 ORTHO05D001770 2.3e-08 63.5 183 35.5
QL07p032796 Quercus lobata HOM05D002277 ORTHO05D001770 2.3e-08 63.5 201 34.3
TAR623G1362 Trochodendron aralioides HOM05D002277 ORTHO05D001770 3.0e-08 63.2 209 33.0
MSTRG.27280 Avicennia marina HOM05D002277 ORTHO05D001770 3.9e-08 62.8 195 36.9
Manes.07G138400 Manihot esculenta HOM05D002277 ORTHO05D001770 3.9e-08 62.8 159 35.8
PGR031G1525 Punica granatum HOM05D002277 ORTHO05D001770 3.9e-08 62.8 120 37.5
Nitab4.5_0002279g0120 Nicotiana tabacum HOM05D002277 ORTHO05D001770 5.1e-08 62.4 35 91.4
Phvul.010G067300 Phaseolus vulgaris HOM05D002277 ORTHO05D001770 5.1e-08 62.4 78 46.2
Ciclev10033390m.g Citrus clementina HOM05D002277 ORTHO05D001770 6.6e-08 62.0 240 32.9
Thecc.04G155300 Theobroma cacao HOM05D002277 ORTHO05D001770 6.6e-08 62.0 171 33.9
VMungo0331G0789 Vigna mungo HOM05D002277 ORTHO05D001770 6.6e-08 62.0 78 46.2
Actinidia33883 Actinidia chinensis HOM05D002277 ORTHO05D001770 8.6e-08 61.6 178 29.8
CSS0032322 Camellia sinensis var. sinensis HOM05D002277 ORTHO05D001770 1.1e-07 61.2 206 32.0
Glyma.01G131200 Glycine max HOM05D002277 ORTHO05D001770 1.1e-07 61.2 114 40.4
Lsat_1_v5_gn_5_148320 Lactuca sativa HOM05D002277 ORTHO05D001770 1.5e-07 60.8 212 30.2
Duzib268G1048 Durio zibethinus HOM05D002277 ORTHO05D001770 1.9e-07 60.5 187 35.8
Cpa.g.sc19.91 Carica papaya HOM05D002277 ORTHO05D001770 2.5e-07 60.1 125 36.8
Sabra06G0083400 Salix brachista HOM05D002277 ORTHO05D001770 2.5e-07 60.1 194 34.0
TAR633G2754 Trochodendron aralioides HOM05D002277 ORTHO05D001770 3.3e-07 59.7 216 33.3
CSS0043215 Camellia sinensis var. sinensis HOM05D002277 ORTHO05D001770 4.3e-07 59.3 182 33.0
QL08p064469 Quercus lobata HOM05D002277 ORTHO05D001770 4.3e-07 59.3 195 31.8
Sed0026001 Sechium edule HOM05D002277 ORTHO05D001770 5.6e-07 58.9 213 37.1
arahy.Tifrunner.gnm1.ann1.H4MVMY Arachis hypogaea HOM05D002277 ORTHO05D001770 7.3e-07 58.5 65 49.2
CiPaw.01G304400 Carya illinoinensis HOM05D002277 ORTHO05D001770 7.3e-07 58.5 196 32.1
Duzib212G0079 Durio zibethinus HOM05D002277 ORTHO05D001770 7.3e-07 58.5 175 34.9
Gohir.A10G181050 Gossypium hirsutum HOM05D002277 ORTHO05D001770 7.3e-07 58.5 226 33.2
Gorai.011G210700 Gossypium raimondii HOM05D002277 ORTHO05D001770 9.6e-07 58.2 229 32.8
Lj1g0022794 Lotus japonicus HOM05D002277 ORTHO05D001770 9.6e-07 58.2 67 49.3
Phvul.005G105700 Phaseolus vulgaris HOM05D002277 ORTHO05D001770 9.6e-07 58.2 67 49.3
Psat7g229920 Pisum sativum HOM05D002277 ORTHO05D001770 9.6e-07 58.2 192 33.3
Sabra04G0150900 Salix brachista HOM05D002277 ORTHO05D001770 9.6e-07 58.2 125 36.0
Cfa017063 Carpinus fangiana HOM05D002277 ORTHO05D001770 1.2e-06 57.8 173 32.9
Haze_21138 Corylus avellana HOM05D002277 ORTHO05D001770 1.2e-06 57.8 127 36.2
Haze_21144 Corylus avellana HOM05D002277 ORTHO05D001770 1.2e-06 57.8 127 36.2
Haze_21148 Corylus avellana HOM05D002277 ORTHO05D001770 1.2e-06 57.8 127 36.2
Gohir.D10G187900 Gossypium hirsutum HOM05D002277 ORTHO05D001770 1.2e-06 57.8 226 32.3
Lalb_Chr07g0190701 Lupinus albus HOM05D002277 ORTHO05D001770 1.2e-06 57.8 67 50.7
Phvul.008G218400 Phaseolus vulgaris HOM05D002277 ORTHO05D001770 1.2e-06 57.8 206 31.1
Ca_24067_v3 Cicer arietinum L. HOM05D002277 ORTHO05D001770 1.6e-06 57.4 202 31.7
Gohir.D10G117600 Gossypium hirsutum HOM05D002277 ORTHO05D001770 1.6e-06 57.4 122 38.5
Potri.016G133200 Populus trichocarpa HOM05D002277 ORTHO05D001770 1.6e-06 57.4 179 34.6
ATR0681G220 Amborella trichopoda HOM05D002277 ORTHO05D001770 2.1e-06 57.0 67 44.8
CSS0000970 Camellia sinensis var. sinensis HOM05D002277 ORTHO05D001770 2.1e-06 57.0 182 32.4
Ca_19777_v3 Cicer arietinum L. HOM05D002277 ORTHO05D001770 2.1e-06 57.0 203 36.9
Glyma.09G277500 Glycine max HOM05D002277 ORTHO05D001770 2.1e-06 57.0 128 39.1
Glyma.14G053500 Glycine max HOM05D002277 ORTHO05D001770 2.1e-06 57.0 134 35.1
Nn2g13334 Nelumbo nucifera HOM05D002277 ORTHO05D001770 2.1e-06 57.0 130 36.2
Gohir.A10G149200 Gossypium hirsutum HOM05D002277 ORTHO05D001770 2.8e-06 56.6 165 33.9
Lj3g0001226 Lotus japonicus HOM05D002277 ORTHO05D001770 2.8e-06 56.6 191 34.6
Lalb_Chr19g0124091 Lupinus albus HOM05D002277 ORTHO05D001770 2.8e-06 56.6 174 36.2
Manes.10G005600 Manihot esculenta HOM05D002277 ORTHO05D001770 2.8e-06 56.6 65 44.6
Psat3g121440 Pisum sativum HOM05D002277 ORTHO05D001770 2.8e-06 56.6 73 45.2
TWI09G0487 Tripterygium wilfordii HOM05D002277 ORTHO05D001770 2.8e-06 56.6 123 40.7
Atru.chr12.148 Acer truncatum HOM05D002277 ORTHO05D001770 3.6e-06 56.2 65 47.7
CANSAT56G3800 Cannabis sativa HOM05D002277 ORTHO05D001770 3.6e-06 56.2 66 43.9
Gorai.013G006000 Gossypium raimondii HOM05D002277 ORTHO05D001770 3.6e-06 56.2 193 31.1
TPR.G4419 Trifolium pratense HOM05D002277 ORTHO05D001770 3.6e-06 56.2 78 42.3
VMungo1383G3736 Vigna mungo HOM05D002277 ORTHO05D001770 3.6e-06 56.2 184 35.3
Gohir.A13G005650 Gossypium hirsutum HOM05D002277 ORTHO05D001770 4.7e-06 55.8 143 34.3
Gohir.D13G005350 Gossypium hirsutum HOM05D002277 ORTHO05D001770 4.7e-06 55.8 194 32.0
Hma1.2p1_1240F.1_g269550 Hydrangea macrophylla HOM05D002277 ORTHO05D001770 4.7e-06 55.8 120 37.5
Medtr7g072540 Medicago truncatula HOM05D002277 ORTHO05D001770 4.7e-06 55.8 78 42.3
Gorai.011G129500 Gossypium raimondii HOM05D002277 ORTHO05D001770 6.2e-06 55.5 127 42.5
TPR.G649 Trifolium pratense HOM05D002277 ORTHO05D001770 6.2e-06 55.5 65 44.6
CDE07G2070 Ceratophyllum demersum HOM05D002277 ORTHO05D001770 8.1e-06 55.1 62 46.8
Cc06_g00560 Coffea canephora HOM05D002277 ORTHO05D001770 8.1e-06 55.1 125 36.8
CsaV3_6G002200 Cucumis sativus L. HOM05D002277 ORTHO05D001770 8.1e-06 55.1 71 45.1
Glyma.18G211300 Glycine max HOM05D002277 ORTHO05D001770 8.1e-06 55.1 178 32.6
Oeu024724.1 Olea europaea HOM05D002277 ORTHO05D001770 8.1e-06 55.1 209 31.6


User provided reference genes

Program Settings