Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen05g030630 Solanum pennellii HOM05D003010 ORTHO05D003623 1.7e-51 205.7 101 100.0
Solyc05g052080.1 Solanum lycopersicum HOM05D003010 ORTHO05D003623 1.2e-41 172.9 94 92.6
Nitab4.5_0002211g0010 Nicotiana tabacum HOM05D003010 ORTHO05D003623 2.5e-31 138.7 89 73.0
Peaxi162Scf00167g01022 Petunia axillaris HOM05D003010 ORTHO05D003623 4.3e-31 137.9 89 71.9
Nitab4.5_0002236g0070 Nicotiana tabacum HOM05D003010 ORTHO05D003623 3.7e-30 134.8 89 71.9
Cc02_g04820 Coffea canephora HOM05D003010 ORTHO05D003623 4.1e-21 104.8 92 58.7
Potri.001G080500 Populus trichocarpa HOM05D003010 ORTHO05D003623 9.1e-21 103.6 82 61.0
PGR042G0835 Punica granatum HOM05D003010 ORTHO05D003623 1.1e-18 96.7 96 56.2
Actinidia01040 Actinidia chinensis HOM05D000255 ORTHO05D000935 2.5e-18 95.5 62 74.2
Thhalv10015492m.g Eutrema salsugineum HOM05D003010 ORTHO05D003623 4.2e-18 94.7 62 71.0
THA.LOC104801625 Tarenaya hassleriana HOM05D003010 ORTHO05D003623 5.5e-18 94.4 62 71.0
Atru.chr1.925 Acer truncatum HOM05D003010 ORTHO05D003623 9.4e-18 93.6 88 50.0
AL6G17794 Arabidopsis lyrata HOM05D003010 ORTHO05D003623 9.4e-18 93.6 62 69.4
AT5G07490 Arabidopsis thaliana HOM05D003010 ORTHO05D003623 9.4e-18 93.6 62 69.4
Aa31LG3G18910 Aethionema arabicum HOM05D003010 ORTHO05D003623 1.2e-17 93.2 62 69.4
Cpa.g.sc13.241 Carica papaya HOM05D003010 ORTHO05D003623 1.6e-17 92.8 70 64.3
DCAR_020169 Daucus carota HOM05D003010 ORTHO05D003623 2.1e-17 92.4 70 60.0
Prupe.2G271700 Prunus persica HOM05D003010 ORTHO05D003623 2.7e-17 92.0 73 60.3
BcaB01g05695 Brassica carinata HOM05D003010 ORTHO05D003623 3.6e-17 91.7 100 52.0
Sabra01G0057700 Salix brachista HOM05D000255 ORTHO05D000935 4.7e-17 91.3 67 64.2
Sp6g35370 Schrenkiella parvula HOM05D003010 ORTHO05D003623 7.9e-17 90.5 62 67.7
Thecc.03G147400 Theobroma cacao HOM05D003010 ORTHO05D003623 7.9e-17 90.5 91 51.6
Actinidia31768 Actinidia chinensis HOM05D003010 ORTHO05D003623 1.0e-16 90.1 84 56.0
BcaB01g06045 Brassica carinata HOM05D003010 ORTHO05D003623 1.0e-16 90.1 62 69.4
BolC3t12913H Brassica oleracea HOM05D003010 ORTHO05D003623 1.0e-16 90.1 62 69.4
CARHR275430 Cardamine hirsuta HOM05D003010 ORTHO05D003623 1.4e-16 89.7 98 50.0
BcaB01g05694 Brassica carinata HOM05D003010 ORTHO05D003623 1.8e-16 89.4 66 66.7
A03p03330 Brassica napus HOM05D003010 ORTHO05D003623 1.8e-16 89.4 87 55.2
BraA03t09685Z Brassica rapa HOM05D003010 ORTHO05D003623 1.8e-16 89.4 87 55.2
MD07G1247700 Malus domestica HOM05D003010 ORTHO05D003623 1.8e-16 89.4 95 50.5
BcaC06g33261 Brassica carinata HOM05D003010 ORTHO05D003623 2.3e-16 89.0 62 66.1
A03p47240 Brassica napus HOM05D003010 ORTHO05D003623 2.3e-16 89.0 62 66.1
C07p45350 Brassica napus HOM05D003010 ORTHO05D003623 2.3e-16 89.0 62 66.1
BolC7t45056H Brassica oleracea HOM05D003010 ORTHO05D003623 2.3e-16 89.0 62 66.1
BraA03t13851Z Brassica rapa HOM05D003010 ORTHO05D003623 2.3e-16 89.0 62 66.1
Gohir.A09G248900 Gossypium hirsutum HOM05D003010 ORTHO05D003623 2.3e-16 89.0 73 60.3
Lj1A974G32 Lonicera japonica HOM05D003010 ORTHO05D003623 3.0e-16 88.6 83 56.6
CARHR205640 Cardamine hirsuta HOM05D003010 ORTHO05D003623 3.9e-16 88.2 62 66.1
Thhalv10005478m.g Eutrema salsugineum HOM05D003010 ORTHO05D003623 3.9e-16 88.2 62 66.1
SalBow3G0012 Salvia bowleyana HOM05D003010 ORTHO05D003623 3.9e-16 88.2 84 54.8
SalBow3G1605 Salvia bowleyana HOM05D003010 ORTHO05D003623 3.9e-16 88.2 84 54.8
AL8G38370 Arabidopsis lyrata HOM05D003010 ORTHO05D003623 5.1e-16 87.8 62 64.5
AT5G61630 Arabidopsis thaliana HOM05D003010 ORTHO05D003623 5.1e-16 87.8 62 64.5
CiPaw.07G184100 Carya illinoinensis HOM05D003010 ORTHO05D003623 5.1e-16 87.8 72 58.3
Gohir.D09G249800 Gossypium hirsutum HOM05D003010 ORTHO05D003623 5.1e-16 87.8 73 58.9
Gorai.006G274200 Gossypium raimondii HOM05D003010 ORTHO05D003623 5.1e-16 87.8 73 58.9
Migut.F00533 Erythranthe guttata HOM05D003010 ORTHO05D003623 6.7e-16 87.4 75 60.0
Rhsim09G0189200 Rhododendron simsii HOM05D003010 ORTHO05D003623 8.8e-16 87.0 64 59.4
SGA_v2.0_scaffold60G20833 Striga asiatica HOM05D003010 ORTHO05D003623 8.8e-16 87.0 85 55.3
C03p03770 Brassica napus HOM05D003010 ORTHO05D003623 1.1e-15 86.7 62 67.7
Carub.0008s2233 Capsella rubella HOM05D003010 ORTHO05D003623 1.1e-15 86.7 93 51.6
Sp2g24840 Schrenkiella parvula HOM05D003010 ORTHO05D003623 1.1e-15 86.7 62 64.5
RcHm_v2.0_Chr1g0373521 Rosa chinensis HOM05D003010 ORTHO05D003623 1.5e-15 86.3 73 57.5
TWI39G0461 Tripterygium wilfordii HOM05D003010 ORTHO05D003623 2.0e-15 85.9 88 52.3
BcaC06g33143 Brassica carinata HOM05D003010 ORTHO05D003623 2.6e-15 85.5 62 62.9
ClCG07G017110 Citrullus lanatus HOM05D003010 ORTHO05D003623 3.3e-15 85.1 73 54.8
Duzib205G1260 Durio zibethinus HOM05D003010 ORTHO05D003623 4.4e-15 84.7 91 52.7
Eucgr.A02926 Eucalyptus grandis HOM05D003010 ORTHO05D003623 4.4e-15 84.7 77 58.4
Lj5g0011838 Lotus japonicus HOM05D003010 ORTHO05D003623 4.4e-15 84.7 94 46.8
Lalb_Chr06g0169801 Lupinus albus HOM05D003010 ORTHO05D003623 7.4e-15 84.0 90 46.7
FAN01G3086 Fragaria x ananassa HOM05D003010 ORTHO05D003623 9.7e-15 83.6 73 57.5
Phvul.007G138100 Phaseolus vulgaris HOM05D003010 ORTHO05D003623 9.7e-15 83.6 77 51.9
BcaC03g18078 Brassica carinata HOM05D003010 ORTHO05D003623 1.3e-14 83.2 62 61.3
A02p41560 Brassica napus HOM05D003010 ORTHO05D003623 1.3e-14 83.2 62 61.3
C02p61500 Brassica napus HOM05D003010 ORTHO05D003623 1.3e-14 83.2 62 61.3
BolC2t12200H Brassica oleracea HOM05D003010 ORTHO05D003623 1.3e-14 83.2 62 61.3
BraA02t09098Z Brassica rapa HOM05D003010 ORTHO05D003623 1.3e-14 83.2 62 61.3
TAR636G0256 Trochodendron aralioides HOM05D003010 ORTHO05D003623 1.7e-14 82.8 82 54.9
COL.COLO4_37328 Corchorus olitorius HOM05D000255 ORTHO05D000935 2.2e-14 82.4 62 59.7
Glyma.10G193700 Glycine max HOM05D003010 ORTHO05D003623 2.2e-14 82.4 73 53.4
Medtr1g090200 Medicago truncatula HOM05D003010 ORTHO05D003623 2.2e-14 82.4 73 53.4
FAN03G0814 Fragaria x ananassa HOM05D000255 ORTHO05D003623 2.8e-14 82.0 73 57.5
FAN10G3636 Fragaria x ananassa HOM05D003010 ORTHO05D003623 2.8e-14 82.0 73 56.2
vmacro09926 Vaccinium macrocarpon HOM05D003010 ORTHO05D003623 2.8e-14 82.0 64 57.8
FvH4_7g26830 Fragaria vesca HOM05D003010 ORTHO05D003623 3.7e-14 81.6 73 57.5
Glyma.20G196700 Glycine max HOM05D003010 ORTHO05D003623 3.7e-14 81.6 73 53.4
Nn6g33810 Nelumbo nucifera HOM05D003010 ORTHO05D003623 3.7e-14 81.6 83 51.8
arahy.Tifrunner.gnm1.ann1.I909QJ Arachis hypogaea HOM05D003010 ORTHO05D003623 1.1e-13 80.1 77 50.6
GSVIVG01013867001 Vitis vinifera HOM05D003010 ORTHO05D003623 1.1e-13 80.1 58 63.8
MELO3C017634.2 Cucumis melo HOM05D003010 ORTHO05D003623 1.8e-13 79.3 60 55.0
FAN06G5032 Fragaria x ananassa HOM05D000255 ORTHO05D000935 3.1e-13 78.6 73 56.2
QL09p027705 Quercus lobata HOM05D003010 ORTHO05D003623 7.0e-13 77.4 73 50.7
Aqoxy3G02705 Aquilegia oxysepala HOM05D003010 ORTHO05D003623 1.2e-12 76.6 79 48.1
TAR629G3508 Trochodendron aralioides HOM05D003010 ORTHO05D003623 1.6e-12 76.3 85 51.8
Ca_10413_v3 Cicer arietinum L. HOM05D003010 ORTHO05D000523 2.0e-12 75.9 67 50.7
Carub.0006s0648 Capsella rubella HOM05D003010 ORTHO05D003623 3.5e-12 75.1 64 59.4
Sed0025535 Sechium edule HOM05D003010 ORTHO05D003623 4.5e-12 74.7 73 46.6
Cfa013595 Carpinus fangiana HOM05D000255 ORTHO05D000935 5.9e-12 74.3 62 54.8
CANSAT56G3417 Cannabis sativa HOM05D003010 ORTHO05D003623 7.7e-12 73.9 73 53.4
Manes.06G130601 Manihot esculenta HOM05D003010 ORTHO05D003623 7.7e-12 73.9 84 50.0
arahy.Tifrunner.gnm1.ann1.Y5VFEC Arachis hypogaea HOM05D003010 ORTHO05D003623 2.2e-11 72.4 77 48.1
Haze_22213 Corylus avellana HOM05D000255 ORTHO05D000935 6.5e-11 70.9 62 51.6
Ah.12g054120 Amaranthus hybridus HOM05D003010 ORTHO05D003623 1.5e-10 69.7 92 44.6
CsaV3_4G004320 Cucumis sativus L. HOM05D003010 ORTHO05D003623 1.5e-10 69.7 64 48.4
Manes.14G039600 Manihot esculenta HOM05D003010 ORTHO05D003623 1.5e-10 69.7 56 55.4
Hund14501 Selenicereus undatus HOM05D003010 ORTHO05D003623 2.5e-10 68.9 65 49.2
PSO782G2859 Papaver somniferum HOM05D003010 ORTHO05D003623 5.5e-10 67.8 60 51.7
vmacro00038 Vaccinium macrocarpon HOM05D003010 ORTHO05D003623 5.5e-10 67.8 79 41.8
Actinidia25899 Actinidia chinensis HOM05D003010 ORTHO05D003623 6.1e-09 64.3 64 46.9
Hund11331 Selenicereus undatus HOM05D003010 ORTHO05D003623 8.0e-09 63.9 80 43.8
EL10Ac5g12296 Beta vulgaris HOM05D003010 ORTHO05D003623 1.0e-08 63.5 86 41.9
HPP92_023172 Vanilla planifolia HOM05D003010 ORTHO05D003623 1.0e-08 63.5 75 42.7
Sc07g0009120 Simmondsia chinensis HOM05D003010 ORTHO05D003623 1.8e-08 62.8 70 50.0
Sc01g0008150 Simmondsia chinensis HOM05D003010 ORTHO05D003623 2.3e-08 62.4 96 38.5
TPR.G13393 Trifolium pratense HOM05D003010 ORTHO05D003623 5.2e-08 61.2 34 76.5
ECA238G2786 Erigeron canadensis HOM05D003010 ORTHO05D003623 6.7e-08 60.8 61 47.5
Ciclev10007152m.g Citrus clementina HOM05D003010 ORTHO05D003623 2.0e-07 59.3 34 73.5
Lj8C48T14 Lonicera japonica HOM05D003010 ORTHO05D003623 2.0e-07 59.3 35 68.6
Hma1.2p1_1014F.1_g248010 Hydrangea macrophylla HOM05D003010 ORTHO05D003623 2.6e-07 58.9 34 73.5
Hma1.2p1_1305F.1_g274559 Hydrangea macrophylla HOM05D003010 ORTHO05D003623 2.6e-07 58.9 34 73.5
GSVIVG01007344001 Vitis vinifera HOM05D003010 ORTHO05D003623 3.3e-07 58.5 64 46.9
HanXRQChr14g0461131 Helianthus annuus HOM05D003010 ORTHO05D003623 7.5e-07 57.4 57 47.4
MBI04_g29855_MAGBIO Magnolia biondii HOM05D005914 ORTHO05D007361 9.7e-07 57.0 56 46.4
Nn1g00825 Nelumbo nucifera HOM05D003010 ORTHO05D003623 9.7e-07 57.0 35 65.7
Dinv16875 Davidia involucrata HOM05D003010 ORTHO05D003623 2.2e-06 55.8 37 64.9
PSO801G0586 Papaver somniferum HOM05D003010 ORTHO05D003623 2.8e-06 55.5 86 37.2
Thecc.03G243800 Theobroma cacao HOM05D003010 ORTHO05D003623 3.7e-06 55.1 34 64.7
PSO063G3783 Papaver somniferum HOM05D003010 ORTHO05D003623 4.8e-06 54.7 51 51.0
RcHm_v2.0_Chr7g0204931 Rosa chinensis HOM05D003010 ORTHO05D003623 6.3e-06 54.3 34 67.6
Migut.F01206 Erythranthe guttata HOM05D003010 ORTHO05D003623 8.2e-06 53.9 34 67.6


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