Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen05g029880 Solanum pennellii HOM05D008176 ORTHO05D004477 8.5e-64 246.9 130 100.0
PGSC0003DMG400016791 Solanum tuberosum HOM05D008176 ORTHO05D004477 2.7e-49 198.7 133 82.0
Sopen05g029890 Solanum pennellii HOM05D008176 ORTHO05D004477 5.2e-29 131.3 121 63.6
PGSC0003DMG400016792 Solanum tuberosum HOM05D008176 ORTHO05D004477 1.7e-24 116.3 121 62.8
Nitab4.5_0012818g0010 Nicotiana tabacum HOM05D008176 ORTHO05D004477 4.3e-23 111.7 136 55.9
Nitab4.5_0000128g0240 Nicotiana tabacum HOM05D008176 ORTHO05D004477 6.2e-22 107.8 133 55.6
Peaxi162Scf00237g00201 Petunia axillaris HOM05D008176 ORTHO05D004477 2.4e-21 105.9 127 53.5
Solyc11g010250.1 Solanum lycopersicum HOM05D008176 ORTHO05D004477 4.0e-21 105.1 128 51.6
Sopen11g005030 Solanum pennellii HOM05D008176 ORTHO05D004477 5.2e-21 104.8 127 52.0
PGSC0003DMG400016149 Solanum tuberosum HOM05D008176 ORTHO05D004477 6.8e-21 104.4 127 52.0
TAR625G0942 Trochodendron aralioides HOM05D008046 ORTHO05D004477 2.9e-11 72.4 126 42.9
Dinv13234 Davidia involucrata HOM05D008176 ORTHO05D004477 1.4e-10 70.1 132 46.2
COL.COLO4_27295 Corchorus olitorius HOM05D008176 ORTHO05D004477 4.2e-10 68.6 144 36.1
Nn5g30002 Nelumbo nucifera HOM05D008176 ORTHO05D004477 5.4e-10 68.2 120 39.2
MSTRG.23362 Avicennia marina HOM05D008176 ORTHO05D004477 1.6e-09 66.6 136 36.8
TAR381G0533 Trochodendron aralioides HOM05D008046 ORTHO05D004477 2.1e-09 66.2 127 44.9
GSVIVG01009081001 Vitis vinifera HOM05D008046 ORTHO05D004477 3.5e-09 65.5 124 44.4
Atru.chr3.1344 Acer truncatum HOM05D008176 ORTHO05D004477 7.8e-09 64.3 128 38.3
TWI74G1149 Tripterygium wilfordii HOM05D008176 ORTHO05D004477 7.8e-09 64.3 126 40.5
Ciclev10026640m.g Citrus clementina HOM05D008176 ORTHO05D004477 2.3e-08 62.8 137 42.3
Haze_24851 Corylus avellana HOM05D008176 ORTHO05D004477 2.3e-08 62.8 125 44.8
Lj4g0008028 Lotus japonicus HOM05D008176 ORTHO05D004477 2.3e-08 62.8 119 40.3
Oeu048965.1 Olea europaea HOM05D008046 ORTHO05D004477 2.3e-08 62.8 127 44.1
QL06p048130 Quercus lobata HOM05D008176 ORTHO05D004477 2.3e-08 62.8 128 39.8
Gohir.A02G129700 Gossypium hirsutum HOM05D008176 ORTHO05D004477 3.0e-08 62.4 131 37.4
Nitab4.5_0003888g0010 Nicotiana tabacum HOM05D013332 ORTHO05D004477 3.0e-08 62.4 97 47.4
CiPaw.04G103600 Carya illinoinensis HOM05D008176 ORTHO05D004477 3.9e-08 62.0 133 39.1
Gohir.D03G040500 Gossypium hirsutum HOM05D008176 ORTHO05D004477 8.7e-08 60.8 127 36.2
Gorai.003G041400 Gossypium raimondii HOM05D008176 ORTHO05D004477 8.7e-08 60.8 127 36.2
Manes.12G129900 Manihot esculenta HOM05D008176 ORTHO05D004477 8.7e-08 60.8 141 36.9
CSS0039341 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 1.5e-07 60.1 121 41.3
Cfa002600 Carpinus fangiana HOM05D008176 ORTHO05D004477 1.9e-07 59.7 127 40.9
TWI53G0271 Tripterygium wilfordii HOM05D008176 ORTHO05D004477 1.9e-07 59.7 120 35.0
CSS0034401 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 2.5e-07 59.3 121 43.0
Lsat_1_v5_gn_6_104300 Lactuca sativa HOM05D008046 ORTHO05D004477 2.5e-07 59.3 114 43.9
Nn1g05455 Nelumbo nucifera HOM05D008046 ORTHO05D004477 3.3e-07 58.9 125 40.0
Potri.005G072000 Populus trichocarpa HOM05D008176 ORTHO05D004477 3.3e-07 58.9 125 39.2
SalBow3G2508 Salvia bowleyana HOM05D029310 ORTHO05D004477 4.3e-07 58.5 126 36.5
SalBow3G3284 Salvia bowleyana HOM05D029310 ORTHO05D004477 4.3e-07 58.5 126 36.5
CSS0041686 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 7.3e-07 57.8 126 42.1
Psat7g056440 Pisum sativum HOM05D008176 ORTHO05D004477 7.3e-07 57.8 126 39.7
CSS0046665 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 9.6e-07 57.4 127 41.7
Gohir.A11G051100 Gossypium hirsutum HOM05D008176 ORTHO05D004477 9.6e-07 57.4 140 40.7
Thecc.01G095600 Theobroma cacao HOM05D008176 ORTHO05D004477 9.6e-07 57.4 127 37.8
VMungo1383G1959 Vigna mungo HOM05D008176 ORTHO05D004477 9.6e-07 57.4 124 35.5
CiPaw.03G145800 Carya illinoinensis HOM05D008176 ORTHO05D004477 1.3e-06 57.0 131 33.6
Aqoxy6G00716 Aquilegia oxysepala HOM05D008046 ORTHO05D004477 1.6e-06 56.6 137 33.6
Duzib187G0825 Durio zibethinus HOM05D008176 ORTHO05D004477 1.6e-06 56.6 130 36.2
Gorai.007G059700 Gossypium raimondii HOM05D008176 ORTHO05D004477 2.1e-06 56.2 138 36.2
TWI12G0518 Tripterygium wilfordii HOM05D008046 ORTHO05D004477 2.1e-06 56.2 138 34.1
DCAR_014203 Daucus carota HOM05D013332 ORTHO05D004477 3.6e-06 55.5 118 40.7
Cpa.g.sc55.74 Carica papaya HOM05D008176 ORTHO05D004477 4.8e-06 55.1 141 34.8
Duzib264G0386 Durio zibethinus HOM05D008176 ORTHO05D004477 4.8e-06 55.1 131 32.1
Potri.005G161700 Populus trichocarpa HOM05D008046 ORTHO05D004477 4.8e-06 55.1 122 41.8
TAR628G0226 Trochodendron aralioides HOM05D008046 ORTHO05D004477 6.2e-06 54.7 120 43.3
Glyma.11G242100 Glycine max HOM05D008176 ORTHO05D004477 8.1e-06 54.3 117 32.5
Potri.002G100500 Populus trichocarpa HOM05D008046 ORTHO05D004477 8.1e-06 54.3 136 33.8


User provided reference genes

Program Settings