Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen05g029530 Solanum pennellii HOM05D008174 ORTHO05D010206 2.3e-101 372.5 223 100.0
Solyc05g051080.3 Solanum lycopersicum HOM05D008174 ORTHO05D010206 8.6e-64 247.7 215 77.2
PGSC0003DMG400039569 Solanum tuberosum HOM05D008174 ORTHO05D010206 1.9e-58 229.9 206 77.7
Solyc06g051770.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 4.6e-25 119.0 207 36.2
CAN.G998.16 Capsicum annuum HOM05D008174 ORTHO05D010206 6.0e-25 118.6 211 37.0
Sopen06g017730 Solanum pennellii HOM05D000014 ORTHO05D010206 1.0e-24 117.9 199 37.7
Sopen10g018310 Solanum pennellii HOM05D008174 ORTHO05D010206 1.3e-24 117.5 206 36.9
CAN.G112.8 Capsicum annuum HOM05D008174 ORTHO05D010206 4.3e-23 112.5 202 36.6
Solyc10g047720.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 7.4e-23 111.7 206 35.9
Nitab4.5_0002222g0010 Nicotiana tabacum HOM05D008174 ORTHO05D010206 1.6e-22 110.5 193 36.8
PGSC0003DMG400039877 Solanum tuberosum HOM05D008174 ORTHO05D010206 1.6e-22 110.5 212 34.4
PGSC0003DMG400038972 Solanum tuberosum HOM05D018142 ORTHO05D010206 3.6e-22 109.4 199 37.2
PGSC0003DMG400021782 Solanum tuberosum HOM05D008174 ORTHO05D010206 8.1e-22 108.2 202 36.6
Peaxi162Scf00424g00033 Petunia axillaris HOM05D008174 ORTHO05D010206 1.8e-21 107.1 201 36.3
CAN.G1363.12 Capsicum annuum HOM05D008174 ORTHO05D010206 6.9e-21 105.1 199 38.2
Solyc05g051120.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 1.2e-20 104.4 209 34.4
Sopen05g028810 Solanum pennellii HOM05D008174 ORTHO05D010206 1.5e-20 104.0 205 34.1
PGSC0003DMG400042098 Solanum tuberosum HOM05D018142 ORTHO05D010206 2.6e-20 103.2 198 33.8
PGSC0003DMG400038058 Solanum tuberosum HOM05D008174 ORTHO05D010206 3.4e-20 102.8 202 35.1
PGSC0003DMG400044185 Solanum tuberosum HOM05D008174 ORTHO05D010206 3.4e-20 102.8 196 33.2
Sopen05g028850 Solanum pennellii HOM05D008174 ORTHO05D010206 5.8e-20 102.1 204 34.3
Nitab4.5_0000777g0110 Nicotiana tabacum HOM05D008174 ORTHO05D010206 9.9e-20 101.3 202 34.2
Sopen05g028860 Solanum pennellii HOM05D000002 ORTHO05D000001 1.3e-19 100.9 129 43.4
PGSC0003DMG400007047 Solanum tuberosum HOM05D008174 ORTHO05D010206 2.2e-19 100.1 197 34.5
PGSC0003DMG400041587 Solanum tuberosum HOM05D018142 ORTHO05D010206 6.4e-19 98.6 198 32.3
Solyc05g050640.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 8.4e-19 98.2 197 34.0
PGSC0003DMG400007040 Solanum tuberosum HOM05D008174 ORTHO05D010206 2.4e-18 96.7 199 35.7
PGSC0003DMG400043206 Solanum tuberosum HOM05D008174 ORTHO05D010206 7.9e-17 91.7 113 41.6
Nitab4.5_0004165g0040 Nicotiana tabacum HOM05D008174 ORTHO05D010206 1.8e-16 90.5 197 31.5
Nitab4.5_0000647g0270 Nicotiana tabacum HOM05D008174 ORTHO05D010206 2.3e-16 90.1 197 31.5
Dinv44264 Davidia involucrata HOM05D008174 ORTHO05D010206 3.9e-16 89.4 199 29.6
PGSC0003DMG400045106 Solanum tuberosum HOM05D018142 ORTHO05D010206 1.1e-15 87.8 192 32.8
PGSC0003DMG400043955 Solanum tuberosum HOM05D008174 ORTHO05D010206 1.9e-15 87.0 183 34.4
Solyc05g051160.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 3.3e-15 86.3 111 40.5
PGSC0003DMG400007005 Solanum tuberosum HOM05D008174 ORTHO05D010206 1.3e-14 84.3 108 38.9
CAN.G305.63 Capsicum annuum HOM05D008174 ORTHO05D010206 1.6e-14 84.0 197 32.0
Solyc05g050660.1 Solanum lycopersicum HOM05D018142 ORTHO05D010206 3.7e-14 82.8 185 34.6
Dinv15598 Davidia involucrata HOM05D008174 ORTHO05D010206 4.8e-14 82.4 196 28.6
PGSC0003DMG400041985 Solanum tuberosum HOM05D008174 ORTHO05D010206 1.4e-13 80.9 197 26.9
PGSC0003DMG400007003 Solanum tuberosum HOM05D008174 ORTHO05D010206 1.8e-13 80.5 108 38.9
CAN.G1086.6 Capsicum annuum HOM05D008174 ORTHO05D010206 2.4e-13 80.1 197 28.9
Sopen05g029070 Solanum pennellii HOM05D018142 ORTHO05D010206 4.0e-13 79.3 185 34.6
PGSC0003DMG400047299 Solanum tuberosum HOM05D008174 ORTHO05D010206 4.5e-12 75.9 171 33.9
PGSC0003DMG400037637 Solanum tuberosum HOM05D008174 ORTHO05D010206 5.8e-12 75.5 79 53.2
PGSC0003DMG400038868 Solanum tuberosum HOM05D008174 ORTHO05D010206 3.8e-11 72.8 79 44.3
Hma1.2p1_0013F.1_g008300 Hydrangea macrophylla HOM05D008174 ORTHO05D010206 1.9e-10 70.5 204 29.9
Peaxi162Scf00424g00035 Petunia axillaris HOM05D008174 ORTHO05D010206 7.1e-10 68.6 174 29.9
Migut.J01515 Erythranthe guttata HOM05D008174 ORTHO05D010206 7.9e-09 65.1 120 32.5
Rhsim06G0163600 Rhododendron simsii HOM05D008174 ORTHO05D010206 7.9e-09 65.1 198 25.8
Solyc05g051090.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 3.9e-08 62.8 154 33.1
Manes.11G074200 Manihot esculenta HOM05D008174 ORTHO05D010206 6.7e-08 62.0 201 24.4
Solyc03g044540.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 2.5e-07 60.1 111 30.6
SalBow6G6908 Salvia bowleyana HOM05D008174 ORTHO05D010206 3.3e-07 59.7 111 31.5
SGA_v2.0_scaffold48G18023 Striga asiatica HOM05D008174 ORTHO05D010206 4.3e-07 59.3 111 34.2
Sopen08g009710 Solanum pennellii HOM05D000004 ORTHO05D000034 3.7e-06 56.2 119 29.4


User provided reference genes

Program Settings