Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen05g029070 Solanum pennellii HOM05D018142 ORTHO05D010206 0.0e+00 1250.0 605 100.0
Solyc05g050660.1 Solanum lycopersicum HOM05D018142 ORTHO05D010206 0.0e+00 1184.5 599 95.8
PGSC0003DMG400041587 Solanum tuberosum HOM05D018142 ORTHO05D010206 6.1e-181 638.3 473 70.2
PGSC0003DMG400042098 Solanum tuberosum HOM05D018142 ORTHO05D010206 2.4e-177 626.3 457 70.9
PGSC0003DMG400038972 Solanum tuberosum HOM05D018142 ORTHO05D010206 1.8e-140 503.8 465 58.3
PGSC0003DMG400045106 Solanum tuberosum HOM05D018142 ORTHO05D010206 8.7e-111 405.2 299 68.6
Sopen05g028860 Solanum pennellii HOM05D000002 ORTHO05D000001 3.8e-90 336.7 311 56.6
PGSC0003DMG400039877 Solanum tuberosum HOM05D008174 ORTHO05D010206 6.0e-35 153.3 265 40.8
Solyc05g051080.3 Solanum lycopersicum HOM05D008174 ORTHO05D010206 2.3e-34 151.4 327 34.3
PGSC0003DMG400007047 Solanum tuberosum HOM05D008174 ORTHO05D010206 2.6e-30 137.9 152 53.3
Sopen05g028850 Solanum pennellii HOM05D008174 ORTHO05D010206 5.8e-30 136.7 151 52.3
PGSC0003DMG400007040 Solanum tuberosum HOM05D008174 ORTHO05D010206 8.4e-29 132.9 150 52.0
Solyc05g050640.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 2.4e-28 131.3 151 50.3
PGSC0003DMG400007039 Solanum tuberosum HOM05D018142 ORTHO05D010544 7.1e-28 129.8 112 62.5
Nitab4.5_0000777g0110 Nicotiana tabacum HOM05D008174 ORTHO05D010206 2.1e-27 128.3 174 44.8
Solyc05g051120.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 4.6e-27 127.1 148 48.6
CAN.G112.8 Capsicum annuum HOM05D008174 ORTHO05D010206 6.0e-27 126.7 175 45.1
PGSC0003DMG400021782 Solanum tuberosum HOM05D008174 ORTHO05D010206 1.3e-26 125.6 151 48.3
PGSC0003DMG400038058 Solanum tuberosum HOM05D008174 ORTHO05D010206 5.1e-26 123.6 151 48.3
CAN.G1363.12 Capsicum annuum HOM05D008174 ORTHO05D010206 1.1e-25 122.5 164 48.2
CAN.G998.16 Capsicum annuum HOM05D008174 ORTHO05D010206 3.3e-25 120.9 174 45.4
Sopen10g018310 Solanum pennellii HOM05D008174 ORTHO05D010206 4.3e-25 120.6 152 48.0
PGSC0003DMG400044185 Solanum tuberosum HOM05D008174 ORTHO05D010206 3.1e-23 114.4 150 47.3
Sopen05g028810 Solanum pennellii HOM05D008174 ORTHO05D010206 5.2e-23 113.6 149 45.0
Peaxi162Scf00424g00033 Petunia axillaris HOM05D008174 ORTHO05D010206 6.9e-23 113.2 148 41.9
Solyc06g051770.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 9.0e-23 112.8 152 47.4
Solyc10g047720.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 1.5e-22 112.1 152 44.7
PGSC0003DMG400007005 Solanum tuberosum HOM05D008174 ORTHO05D010206 4.4e-22 110.5 131 47.3
Sopen06g017730 Solanum pennellii HOM05D000014 ORTHO05D010206 9.9e-22 109.4 161 45.3
PGSC0003DMG400041985 Solanum tuberosum HOM05D008174 ORTHO05D010206 1.7e-21 108.6 151 38.4
Nitab4.5_0002222g0010 Nicotiana tabacum HOM05D008174 ORTHO05D010206 1.9e-20 105.1 143 40.6
PGSC0003DMG400007003 Solanum tuberosum HOM05D008174 ORTHO05D010206 2.1e-19 101.7 114 53.5
Nitab4.5_0004165g0040 Nicotiana tabacum HOM05D008174 ORTHO05D010206 2.7e-19 101.3 150 38.7
Solyc05g051160.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 3.5e-19 100.9 128 46.9
Peaxi162Scf00424g00035 Petunia axillaris HOM05D008174 ORTHO05D010206 7.8e-19 99.8 126 46.0
CAN.G305.63 Capsicum annuum HOM05D008174 ORTHO05D010206 3.0e-18 97.8 152 38.8
Nitab4.5_0000647g0270 Nicotiana tabacum HOM05D008174 ORTHO05D010206 3.9e-18 97.4 150 36.7
PGSC0003DMG400043955 Solanum tuberosum HOM05D008174 ORTHO05D010206 3.9e-18 97.4 151 39.7
CAN.G1086.6 Capsicum annuum HOM05D008174 ORTHO05D010206 1.5e-17 95.5 150 36.0
PGSC0003DMG400043206 Solanum tuberosum HOM05D008174 ORTHO05D010206 4.3e-17 94.0 113 46.9
Dinv15598 Davidia involucrata HOM05D008174 ORTHO05D010206 1.1e-15 89.4 149 36.9
PGSC0003DMG400038868 Solanum tuberosum HOM05D008174 ORTHO05D010206 4.0e-15 87.4 172 35.5
Actinidia06986 Actinidia chinensis HOM05D000001 ORTHO05D000003 2.0e-14 85.1 147 35.4
Sopen05g029530 Solanum pennellii HOM05D008174 ORTHO05D010206 3.4e-14 84.3 185 34.6
Dinv39722 Davidia involucrata HOM05D008174 ORTHO05D010206 4.5e-14 84.0 150 32.7
PGSC0003DMG400047299 Solanum tuberosum HOM05D008174 ORTHO05D010206 7.6e-14 83.2 114 44.7
PGSC0003DMG400039569 Solanum tuberosum HOM05D008174 ORTHO05D010206 9.9e-14 82.8 118 41.5
PGSC0003DMG400034441 Solanum tuberosum HOM05D008174 ORTHO05D010206 2.2e-13 81.6 88 50.0
Solyc05g051090.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 8.4e-13 79.7 87 48.3
SGA_v2.0_scaffold48G18023 Striga asiatica HOM05D008174 ORTHO05D010206 1.4e-12 79.0 158 31.0
Ciclev10026971m.g Citrus clementina HOM05D008174 ORTHO05D010206 1.2e-11 75.9 134 31.3
Manes.11G074200 Manihot esculenta HOM05D008174 ORTHO05D010206 1.2e-11 75.9 137 30.7
SalBow6G6908 Salvia bowleyana HOM05D008174 ORTHO05D010206 1.2e-11 75.9 123 35.8
PGSC0003DMG400037637 Solanum tuberosum HOM05D008174 ORTHO05D010206 4.6e-11 73.9 82 48.8
Hma1.2p1_0013F.1_g008300 Hydrangea macrophylla HOM05D008174 ORTHO05D010206 1.3e-10 72.4 118 31.4
Migut.J01515 Erythranthe guttata HOM05D008174 ORTHO05D010206 1.8e-10 72.0 143 28.7
Dinv44264 Davidia involucrata HOM05D008174 ORTHO05D010206 3.0e-10 71.2 145 29.0
Rhsim06G0163600 Rhododendron simsii HOM05D008174 ORTHO05D010206 5.1e-10 70.5 119 37.8
Migut.C00177 Erythranthe guttata HOM05D008174 ORTHO05D010206 3.3e-09 67.8 110 36.4
SGA_v2.0_scaffold66G22408 Striga asiatica HOM05D008174 ORTHO05D010206 8.1e-08 63.2 130 28.5
CAN.G945.6 Capsicum annuum HOM05D008174 ORTHO05D010206 9.0e-07 59.7 115 31.3
Nn4g25547 Nelumbo nucifera HOM05D001713 ORTHO05D001669 4.5e-06 57.4 168 27.4


User provided reference genes

Program Settings