Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen05g028850 Solanum pennellii HOM05D008174 ORTHO05D010206 6.2e-102 374.0 175 100.0
PGSC0003DMG400007047 Solanum tuberosum HOM05D008174 ORTHO05D010206 1.0e-91 340.1 172 92.4
Solyc05g050640.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 2.2e-91 339.0 166 92.2
PGSC0003DMG400007040 Solanum tuberosum HOM05D008174 ORTHO05D010206 6.3e-86 320.9 166 90.4
PGSC0003DMG400021782 Solanum tuberosum HOM05D008174 ORTHO05D010206 1.5e-66 256.5 172 70.9
Sopen10g018310 Solanum pennellii HOM05D008174 ORTHO05D010206 4.2e-66 255.0 172 68.0
CAN.G112.8 Capsicum annuum HOM05D008174 ORTHO05D010206 6.1e-65 251.1 172 66.9
Solyc05g051120.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 6.1e-65 251.1 171 69.6
PGSC0003DMG400038058 Solanum tuberosum HOM05D008174 ORTHO05D010206 1.0e-64 250.4 172 69.2
PGSC0003DMG400007005 Solanum tuberosum HOM05D008174 ORTHO05D010206 2.0e-63 246.1 131 87.8
PGSC0003DMG400039877 Solanum tuberosum HOM05D008174 ORTHO05D010206 2.2e-62 242.7 172 64.0
Solyc06g051770.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 4.8e-62 241.5 170 65.9
Solyc10g047720.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 1.4e-61 240.0 172 64.0
Sopen06g017730 Solanum pennellii HOM05D000014 ORTHO05D010206 2.4e-61 239.2 169 65.1
Sopen05g028810 Solanum pennellii HOM05D008174 ORTHO05D010206 4.1e-61 238.4 171 62.0
Nitab4.5_0000777g0110 Nicotiana tabacum HOM05D008174 ORTHO05D010206 1.3e-59 233.4 172 60.5
CAN.G998.16 Capsicum annuum HOM05D008174 ORTHO05D010206 1.1e-58 230.3 172 62.2
PGSC0003DMG400043955 Solanum tuberosum HOM05D008174 ORTHO05D010206 1.2e-57 226.9 151 72.2
CAN.G1363.12 Capsicum annuum HOM05D008174 ORTHO05D010206 8.8e-56 220.7 162 64.2
Solyc05g051080.3 Solanum lycopersicum HOM05D008174 ORTHO05D010206 8.8e-56 220.7 173 60.7
PGSC0003DMG400007003 Solanum tuberosum HOM05D008174 ORTHO05D010206 1.5e-55 219.9 118 85.6
PGSC0003DMG400044185 Solanum tuberosum HOM05D008174 ORTHO05D010206 1.5e-55 219.9 164 60.4
Peaxi162Scf00424g00033 Petunia axillaris HOM05D008174 ORTHO05D010206 5.7e-55 218.0 171 61.4
Nitab4.5_0002222g0010 Nicotiana tabacum HOM05D008174 ORTHO05D010206 8.3e-54 214.2 159 61.0
PGSC0003DMG400041985 Solanum tuberosum HOM05D008174 ORTHO05D010206 1.6e-49 199.9 168 51.2
PGSC0003DMG400047299 Solanum tuberosum HOM05D008174 ORTHO05D010206 3.6e-49 198.7 139 64.7
Nitab4.5_0004165g0040 Nicotiana tabacum HOM05D008174 ORTHO05D010206 4.7e-49 198.4 163 54.0
Nitab4.5_0000647g0270 Nicotiana tabacum HOM05D008174 ORTHO05D010206 6.1e-49 198.0 163 54.0
Solyc05g051090.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 1.8e-48 196.4 122 73.8
CAN.G1086.6 Capsicum annuum HOM05D008174 ORTHO05D010206 4.0e-48 195.3 163 54.0
CAN.G305.63 Capsicum annuum HOM05D008174 ORTHO05D010206 8.3e-46 187.6 163 52.8
Dinv44264 Davidia involucrata HOM05D008174 ORTHO05D010206 1.4e-45 186.8 167 51.5
Solyc05g051160.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 1.0e-43 180.6 126 65.1
PGSC0003DMG400034441 Solanum tuberosum HOM05D008174 ORTHO05D010206 6.6e-43 177.9 112 76.8
Dinv15598 Davidia involucrata HOM05D008174 ORTHO05D010206 5.2e-40 168.3 161 46.0
Peaxi162Scf00424g00035 Petunia axillaris HOM05D008174 ORTHO05D010206 4.9e-38 161.8 137 55.5
Rhsim06G0163600 Rhododendron simsii HOM05D008174 ORTHO05D010206 2.4e-37 159.5 166 44.0
Hma1.2p1_0013F.1_g008300 Hydrangea macrophylla HOM05D008174 ORTHO05D010206 1.2e-36 157.1 171 46.8
Actinidia06986 Actinidia chinensis HOM05D000001 ORTHO05D000003 6.6e-35 151.4 162 46.3
Dinv39722 Davidia involucrata HOM05D008174 ORTHO05D010206 6.6e-35 151.4 155 44.5
Migut.J01515 Erythranthe guttata HOM05D008174 ORTHO05D010206 1.9e-34 149.8 166 41.0
PGSC0003DMG400043206 Solanum tuberosum HOM05D008174 ORTHO05D010206 5.6e-34 148.3 114 62.3
Migut.C00177 Erythranthe guttata HOM05D008174 ORTHO05D010206 1.6e-33 146.7 173 39.9
Solyc05g050660.1 Solanum lycopersicum HOM05D018142 ORTHO05D010206 4.0e-32 142.1 151 52.3
Sopen05g029070 Solanum pennellii HOM05D018142 ORTHO05D010206 7.5e-31 137.9 151 52.3
SGA_v2.0_scaffold66G22408 Striga asiatica HOM05D008174 ORTHO05D010206 3.7e-30 135.6 168 39.9
PGSC0003DMG400038972 Solanum tuberosum HOM05D018142 ORTHO05D010206 1.9e-29 133.3 145 49.7
Manes.11G074200 Manihot esculenta HOM05D008174 ORTHO05D010206 5.4e-29 131.7 165 40.0
Sopen05g028860 Solanum pennellii HOM05D000002 ORTHO05D000001 1.7e-27 126.7 145 48.3
SalBow6G6908 Salvia bowleyana HOM05D008174 ORTHO05D010206 1.1e-26 124.0 130 44.6
SGA_v2.0_scaffold48G18023 Striga asiatica HOM05D008174 ORTHO05D010206 2.5e-26 122.9 168 41.1
Ciclev10026971m.g Citrus clementina HOM05D008174 ORTHO05D010206 1.1e-24 117.5 147 38.1
PGSC0003DMG400041587 Solanum tuberosum HOM05D018142 ORTHO05D010206 3.1e-24 115.9 163 41.1
PGSC0003DMG400042098 Solanum tuberosum HOM05D018142 ORTHO05D010206 5.2e-24 115.2 146 46.6
PGSC0003DMG400045106 Solanum tuberosum HOM05D018142 ORTHO05D010206 5.8e-23 111.7 164 42.7
Sopen05g029530 Solanum pennellii HOM05D008174 ORTHO05D010206 4.9e-22 108.6 204 34.3
TAR625G0216 Trochodendron aralioides HOM05D008174 ORTHO05D010206 1.2e-20 104.0 161 34.2
PGSC0003DMG400039569 Solanum tuberosum HOM05D008174 ORTHO05D010206 2.1e-20 103.2 189 36.0
PGSC0003DMG400038868 Solanum tuberosum HOM05D008174 ORTHO05D010206 7.8e-20 101.3 79 60.8
Solyc08g028980.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 6.2e-17 91.7 122 36.9
Ah.08g216590 Amaranthus hybridus HOM05D008174 ORTHO05D010206 8.1e-17 91.3 155 36.1
Solyc03g044540.1 Solanum lycopersicum HOM05D008174 ORTHO05D010206 1.8e-16 90.1 117 35.0
Peaxi162Scf00164g00103 Petunia axillaris HOM05D008174 ORTHO05D010206 6.8e-16 88.2 70 52.9
CSS0024620 Camellia sinensis var. sinensis HOM05D008174 ORTHO05D010206 5.8e-15 85.1 87 43.7
Sopen08g009710 Solanum pennellii HOM05D000004 ORTHO05D000034 7.6e-15 84.7 119 36.1
Peaxi162Scf00095g00111 Petunia axillaris HOM05D008174 ORTHO05D010206 1.9e-13 80.1 56 62.5
PGSC0003DMG400037637 Solanum tuberosum HOM05D008174 ORTHO05D010206 2.4e-13 79.7 97 42.3
Sc06g0009580 Simmondsia chinensis HOM05D002024 ORTHO05D007288 1.6e-12 77.0 113 33.6
CAN.G945.6 Capsicum annuum HOM05D008174 ORTHO05D010206 2.7e-12 76.3 122 31.1
Nn4g25547 Nelumbo nucifera HOM05D001713 ORTHO05D001669 1.3e-11 73.9 170 32.4
FAN10G2415 Fragaria x ananassa HOM05D008174 ORTHO05D010206 2.3e-11 73.2 156 30.8
PGSC0003DMG400007042 Solanum tuberosum HOM05D008174 ORTHO05D010206 6.6e-11 71.6 71 54.9
Actinidia24475 Actinidia chinensis HOM05D008174 ORTHO05D010206 1.5e-10 70.5 69 49.3
Nitab4.5_0009187g0030 Nicotiana tabacum HOM05D008174 ORTHO05D010206 2.5e-10 69.7 41 68.3
CSS0035206 Camellia sinensis var. sinensis HOM05D001713 ORTHO05D001669 4.3e-10 68.9 173 30.1
Nitab4.5_0002222g0090 Nicotiana tabacum HOM05D008174 ORTHO05D010206 4.7e-09 65.5 90 32.2
Aqoxy2G01010 Aquilegia oxysepala HOM05D001713 ORTHO05D001669 1.4e-08 63.9 168 31.0
Actinidia09720 Actinidia chinensis HOM05D008174 ORTHO05D010206 4.0e-08 62.4 69 40.6
TWI34G0085 Tripterygium wilfordii HOM05D001713 ORTHO05D001669 2.6e-07 59.7 179 26.3
Hma1.2p1_2547F.1_g324190 Hydrangea macrophylla HOM05D001713 ORTHO05D001669 3.4e-07 59.3 122 32.0
Hma1.2p1_2547F.1_g324191 Hydrangea macrophylla HOM05D001713 ORTHO05D001669 3.4e-07 59.3 122 32.0
Hma1.2p1_2547F.1_g324193 Hydrangea macrophylla HOM05D001713 ORTHO05D001669 3.4e-07 59.3 122 32.0
QL08p058986 Quercus lobata HOM05D001713 ORTHO05D001669 2.2e-06 56.6 162 28.4
THA.LOC109116201 Tarenaya hassleriana HOM05D001713 ORTHO05D001669 3.8e-06 55.8 120 30.8


User provided reference genes

Program Settings