Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen05g028390 Solanum pennellii HOM05D004971 ORTHO05D006289 1.5e-161 572.8 279 100.0
Solyc05g050000.3 Solanum lycopersicum HOM05D004971 ORTHO05D006289 2.7e-155 552.0 279 96.8
PGSC0003DMG400021659 Solanum tuberosum HOM05D004971 ORTHO05D006289 3.5e-147 525.0 351 77.5
CAN.G399.3 Capsicum annuum HOM05D004971 ORTHO05D006289 1.5e-126 456.4 263 85.2
Nitab4.5_0000066g0130 Nicotiana tabacum HOM05D004971 ORTHO05D006289 7.1e-124 447.6 269 79.2
Nitab4.5_0003331g0010 Nicotiana tabacum HOM05D004971 ORTHO05D006289 2.7e-123 445.7 266 78.9
Peaxi162Scf00539g00614 Petunia axillaris HOM05D004971 ORTHO05D006289 4.9e-117 424.9 276 77.2
MSTRG.19566 Avicennia marina HOM05D004971 ORTHO05D006289 4.5e-102 375.2 270 65.6
Dinv41645 Davidia involucrata HOM05D004971 ORTHO05D006289 7.9e-99 364.4 267 63.3
Oeu000366.2 Olea europaea HOM05D004971 ORTHO05D006289 1.8e-98 363.2 297 60.6
Migut.J01131 Erythranthe guttata HOM05D004971 ORTHO05D006289 2.3e-98 362.8 266 63.2
CSS0031404 Camellia sinensis var. sinensis HOM05D004971 ORTHO05D006289 3.9e-98 362.1 270 61.9
Rhsim03G0239000 Rhododendron simsii HOM05D004971 ORTHO05D006289 3.3e-97 359.0 269 63.2
SGA_v2.0_scaffold20G09148 Striga asiatica HOM05D004971 ORTHO05D006289 9.6e-97 357.5 270 63.3
SGA_v2.0_scaffold22G09903 Striga asiatica HOM05D004971 ORTHO05D006289 1.6e-96 356.7 270 63.0
Cc06_g10130 Coffea canephora HOM05D004971 ORTHO05D006289 2.6e-94 349.4 264 64.0
CANSAT56G2306 Cannabis sativa HOM05D004971 ORTHO05D006289 8.4e-93 344.4 279 59.9
HanXRQChr09g0239411 Helianthus annuus HOM05D004971 ORTHO05D006289 8.4e-93 344.4 267 61.8
GSVIVG01015340001 Vitis vinifera HOM05D004971 ORTHO05D006289 1.1e-92 344.0 271 59.8
ECA240G1764 Erigeron canadensis HOM05D004971 ORTHO05D006289 3.2e-92 342.4 264 61.7
CANSAT56G1645 Cannabis sativa HOM05D004971 ORTHO05D006289 4.6e-91 338.6 279 59.1
Lj4g0001585 Lotus japonicus HOM05D004971 ORTHO05D006289 7.9e-91 337.8 271 59.8
Lalb_Chr05g0223101 Lupinus albus HOM05D004971 ORTHO05D006289 3.9e-90 335.5 268 58.6
Lsat_1_v5_gn_7_41360 Lactuca sativa HOM05D004971 ORTHO05D006289 6.7e-90 334.7 279 59.9
Glyma.08G035500 Glycine max HOM05D004971 ORTHO05D006289 1.1e-89 334.0 268 60.1
QL01p004043 Quercus lobata HOM05D004971 ORTHO05D006289 1.1e-89 334.0 271 62.0
unitig_748.g8739 Utricularia gibba HOM05D004971 ORTHO05D006289 4.3e-89 332.0 266 59.8
CiPaw.03G227700 Carya illinoinensis HOM05D004971 ORTHO05D006289 9.6e-89 330.9 268 61.9
Phvul.002G310900 Phaseolus vulgaris HOM05D004971 ORTHO05D006289 9.6e-89 330.9 275 58.9
THA.LOC104811095 Tarenaya hassleriana HOM05D004971 ORTHO05D006289 9.6e-89 330.9 271 61.6
Prupe.7G224700 Prunus persica HOM05D004971 ORTHO05D006289 1.3e-88 330.5 268 60.4
Eucgr.C03795 Eucalyptus grandis HOM05D004971 ORTHO05D006289 3.7e-88 328.9 272 59.2
Thecc.09G104800 Theobroma cacao HOM05D004971 ORTHO05D006289 3.7e-88 328.9 270 60.0
VMungo0251G3379 Vigna mungo HOM05D004971 ORTHO05D006289 4.8e-88 328.6 275 58.2
AL8G25390 Arabidopsis lyrata HOM05D004971 ORTHO05D006289 8.2e-88 327.8 269 59.9
AT5G51130 Arabidopsis thaliana HOM05D004971 ORTHO05D006289 1.1e-87 327.4 269 59.1
RcHm_v2.0_Chr2g0091361 Rosa chinensis HOM05D004971 ORTHO05D006289 1.4e-87 327.0 272 59.9
CARHR256940 Cardamine hirsuta HOM05D004971 ORTHO05D006289 4.1e-87 325.5 270 60.0
AUR62021639 Chenopodium quinoa HOM05D004971 ORTHO05D006289 5.3e-87 325.1 271 59.8
Hund26242 Selenicereus undatus HOM05D004971 ORTHO05D006289 6.9e-87 324.7 269 56.5
Carub.0008s1117 Capsella rubella HOM05D004971 ORTHO05D006289 9.0e-87 324.3 269 58.7
Thhalv10014188m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 1.5e-86 323.6 266 59.4
Actinidia32663 Actinidia chinensis HOM05D004971 ORTHO05D006289 2.0e-86 323.2 270 57.8
Gohir.D07G007800 Gossypium hirsutum HOM05D004971 ORTHO05D006289 4.5e-86 322.0 272 58.5
Gorai.001G007500 Gossypium raimondii HOM05D004971 ORTHO05D006289 4.5e-86 322.0 272 58.5
Aa31LG3G7640 Aethionema arabicum HOM05D004971 ORTHO05D006289 2.9e-85 319.3 274 58.0
Gohir.A07G004400 Gossypium hirsutum HOM05D004971 ORTHO05D006289 5.0e-85 318.5 283 56.2
Oeu017816.1 Olea europaea HOM05D004971 ORTHO05D006289 6.5e-85 318.2 240 62.1
arahy.Tifrunner.gnm1.ann1.050WC1 Arachis hypogaea HOM05D004971 ORTHO05D006289 8.5e-85 317.8 280 57.1
Nn3g18146 Nelumbo nucifera HOM05D004971 ORTHO05D006289 1.4e-84 317.0 271 56.8
MD15G1192600 Malus domestica HOM05D004971 ORTHO05D006289 1.9e-84 316.6 266 58.6
Atru.chr7.1418 Acer truncatum HOM05D004971 ORTHO05D006289 2.5e-84 316.2 272 58.8
A02p12480 Brassica napus HOM05D004971 ORTHO05D006289 2.5e-84 316.2 260 59.2
BraA02t06311Z Brassica rapa HOM05D004971 ORTHO05D006289 2.5e-84 316.2 260 59.2
Potri.018G084700 Populus trichocarpa HOM05D004971 ORTHO05D006289 2.5e-84 316.2 280 55.4
Sp6g13340 Schrenkiella parvula HOM05D004971 ORTHO05D006289 2.5e-84 316.2 260 59.2
Medtr8g102950 Medicago truncatula HOM05D004971 ORTHO05D006289 4.2e-84 315.5 268 56.7
TPR.G23453 Trifolium pratense HOM05D004971 ORTHO05D006289 4.2e-84 315.5 271 56.1
Sc08g0007770 Simmondsia chinensis HOM05D004971 ORTHO05D006289 9.3e-84 314.3 276 55.8
FvH4_1g05710 Fragaria vesca HOM05D004971 ORTHO05D006289 2.1e-83 313.2 267 57.3
BcaC03g14623 Brassica carinata HOM05D004971 ORTHO05D006289 6.1e-83 311.6 260 58.8
BolC2t08195H Brassica oleracea HOM05D004971 ORTHO05D006289 6.1e-83 311.6 260 58.8
FAN23G0317 Fragaria x ananassa HOM05D001382 ORTHO05D006289 6.1e-83 311.6 268 57.5
Sabra18G0073100 Salix brachista HOM05D004971 ORTHO05D006289 6.1e-83 311.6 267 56.9
BcaC01g06098 Brassica carinata HOM05D004971 ORTHO05D006289 7.9e-83 311.2 266 57.5
C03p19180 Brassica napus HOM05D004971 ORTHO05D006289 7.9e-83 311.2 266 57.5
BolC3t14306H Brassica oleracea HOM05D004971 ORTHO05D006289 7.9e-83 311.2 266 57.5
FAN26G3039 Fragaria x ananassa HOM05D001382 ORTHO05D001266 7.9e-83 311.2 266 57.9
BcaB05g24018 Brassica carinata HOM05D004971 ORTHO05D006289 1.0e-82 310.8 261 58.2
BcaC01g06076 Brassica carinata HOM05D004971 ORTHO05D006289 2.3e-82 309.7 265 58.1
PGR102G0147 Punica granatum HOM05D004971 ORTHO05D006289 2.3e-82 309.7 258 58.9
FAN19G1252 Fragaria x ananassa HOM05D001382 ORTHO05D001266 3.0e-82 309.3 270 56.7
FAN28G1806 Fragaria x ananassa HOM05D001382 ORTHO05D006289 3.0e-82 309.3 266 57.1
C02p20580 Brassica napus HOM05D004971 ORTHO05D006289 6.7e-82 308.1 260 58.5
BraA03t10920Z Brassica rapa HOM05D004971 ORTHO05D006289 8.7e-82 307.8 266 56.0
A03p16290 Brassica napus HOM05D004971 ORTHO05D006289 1.1e-81 307.4 265 55.8
COL.COLO4_34800 Corchorus olitorius HOM05D004971 ORTHO05D006289 1.9e-81 306.6 245 62.9
TWI12G1172 Tripterygium wilfordii HOM05D004971 ORTHO05D006289 1.9e-81 306.6 266 56.8
TAR636G2606 Trochodendron aralioides HOM05D004971 ORTHO05D006289 2.5e-81 306.2 271 55.0
TAR626G1908 Trochodendron aralioides HOM05D001382 ORTHO05D006289 3.3e-81 305.8 271 55.0
ClCG06G008900 Citrullus lanatus HOM05D004971 ORTHO05D006289 2.8e-80 302.8 265 55.1
arahy.Tifrunner.gnm1.ann1.R8N6MQ Arachis hypogaea HOM05D004971 ORTHO05D006289 8.2e-80 301.2 284 54.6
Lj7A659G31 Lonicera japonica HOM05D004971 ORTHO05D006289 2.4e-79 299.7 247 58.3
PSO541G6366 Papaver somniferum HOM05D004971 ORTHO05D006289 2.6e-78 296.2 272 52.6
PSO675G4950 Papaver somniferum HOM05D004971 ORTHO05D006289 3.4e-78 295.8 272 52.2
Psat7g014440 Pisum sativum HOM05D004971 ORTHO05D006289 3.4e-78 295.8 253 55.7
vmacro06238 Vaccinium macrocarpon HOM05D004971 ORTHO05D006289 7.7e-78 294.7 306 50.0
Os08g0540500 Oryza sativa ssp. japonica HOM05D004971 ORTHO05D006289 1.4e-76 290.4 263 53.6
HanXRQChr03g0061421 Helianthus annuus HOM05D004971 ORTHO05D006289 2.1e-75 286.6 254 55.9
CsaV3_1G020790 Cucumis sativus L. HOM05D004971 ORTHO05D006289 6.1e-75 285.0 287 51.2
AUR62008451 Chenopodium quinoa HOM05D004971 ORTHO05D006289 1.4e-74 283.9 252 56.3
Aqoxy7G01513 Aquilegia oxysepala HOM05D004971 ORTHO05D006289 6.7e-74 281.6 271 51.3
Nitab4.5_0002165g0080 Nicotiana tabacum HOM05D004971 ORTHO05D006289 8.8e-74 281.2 275 55.3
SHI02711 Sapria himalayana HOM05D004971 ORTHO05D006289 1.1e-73 280.8 283 49.5
HPP92_012921 Vanilla planifolia HOM05D004971 ORTHO05D006289 7.4e-73 278.1 268 51.9
HPP92_012900 Vanilla planifolia HOM05D004971 ORTHO05D006289 4.8e-72 275.4 268 51.5
Manes.16G112100 Manihot esculenta HOM05D004971 ORTHO05D006289 4.1e-71 272.3 220 59.5
Sed0000382 Sechium edule HOM05D004971 ORTHO05D006289 1.5e-70 270.4 241 56.4
MELO3C024707.2 Cucumis melo HOM05D004971 ORTHO05D006289 3.4e-70 269.2 255 52.9
Ciclev10009268m.g Citrus clementina HOM05D004971 ORTHO05D006289 1.7e-69 266.9 270 51.5
Cfa003218 Carpinus fangiana HOM05D001382 ORTHO05D001266 6.1e-67 258.5 230 58.3
AagrBONN_evm.TU.Sc2ySwM_117.3390 Anthoceros agrestis HOM05D004971 ORTHO05D006289 7.9e-67 258.1 271 46.1
DCAR_028679 Daucus carota HOM05D004971 ORTHO05D006289 1.0e-66 257.7 250 53.6
Mapoly0002s0233 Marchantia polymorpha HOM05D004971 ORTHO05D006289 5.7e-65 251.9 296 41.9
SMO232G0003 Selaginella moellendorffii HOM05D004971 ORTHO05D006289 5.7e-65 251.9 274 46.4
SMO241G0030 Selaginella moellendorffii HOM05D004971 ORTHO05D006289 9.1e-63 244.6 274 46.4
CDE11G0552 Ceratophyllum demersum HOM05D004971 ORTHO05D006289 1.7e-61 240.4 268 46.6
Lalb_Chr14g0371731 Lupinus albus HOM05D004971 ORTHO05D006289 5.0e-61 238.8 257 47.1
SEGI_33858 Sequoiadendron giganteum HOM05D004971 ORTHO05D006289 6.5e-61 238.4 326 39.6
CSS0049746 Camellia sinensis var. sinensis HOM05D004971 ORTHO05D006289 2.3e-58 229.9 195 54.9
Duzib150G1337 Durio zibethinus HOM05D004971 ORTHO05D006289 4.8e-56 222.2 194 56.7
Pp3c17_15270 Physcomitrium patens HOM05D004971 ORTHO05D006289 5.9e-54 215.3 280 40.0
Thhalv10006518m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 1.0e-53 214.5 219 50.2
Thhalv10027230m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 1.0e-53 214.5 219 50.2
Thhalv10026861m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 2.1e-51 206.8 219 49.3
Thhalv10027410m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 2.3e-50 203.4 219 48.9
Thhalv10027350m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 2.2e-48 196.8 225 47.6
MD02G1058100 Malus domestica HOM05D004971 ORTHO05D006289 1.9e-44 183.7 249 41.0
Lalb_Chr24g0397391 Lupinus albus HOM05D004971 ORTHO05D006289 1.2e-43 181.0 190 46.8
ATR0315G075 Amborella trichopoda HOM05D004971 ORTHO05D006289 8.0e-43 178.3 210 43.3
CDE05G3470 Ceratophyllum demersum HOM05D004971 ORTHO05D006289 1.3e-40 171.0 123 65.0
MCO09G154 Micromonas commoda HOM05D004971 ORTHO05D006289 1.1e-39 167.9 269 35.7
CBR_g687 Chara braunii HOM05D004971 ORTHO05D006289 1.8e-39 167.2 418 27.8
Ca_17315_v3 Cicer arietinum L. HOM05D004971 ORTHO05D006289 1.6e-38 164.1 163 50.9
EL10Ac8g18422 Beta vulgaris HOM05D004971 ORTHO05D006289 3.8e-37 159.5 135 59.3
Zm00001eb198370 Zea mays HOM05D004971 ORTHO05D006289 2.3e-34 150.2 162 48.1
PRCOL_00000240 Prasinoderma coloniale HOM05D004971 ORTHO05D006289 1.5e-33 147.5 307 30.3
Haze_02526 Corylus avellana HOM05D004971 ORTHO05D006289 5.9e-30 135.6 140 55.0
Cre15.g636450 Chlamydomonas reinhardtii HOM05D004971 ORTHO05D006289 3.9e-29 132.9 395 26.6
MBI04_g02609_MAGBIO Magnolia biondii HOM05D004971 ORTHO05D000022 3.6e-27 126.3 352 28.1
Lj4g0009518 Lotus japonicus HOM05D004971 ORTHO05D006289 2.6e-25 120.2 74 70.3
arahy.Tifrunner.gnm1.ann1.D57MTL Arachis hypogaea HOM05D004971 ORTHO05D006289 2.9e-24 116.7 154 37.7
Haze_02523 Corylus avellana HOM05D004971 ORTHO05D006289 3.7e-24 116.3 129 53.5
Nitab4.5_0001706g0070 Nicotiana tabacum HOM05D004971 ORTHO05D006289 8.3e-24 115.2 103 56.3
CSS0032398 Camellia sinensis var. sinensis HOM05D004971 ORTHO05D006289 5.4e-23 112.5 58 82.8
arahy.Tifrunner.gnm1.ann1.2J0XRF Arachis hypogaea HOM05D004971 ORTHO05D006289 7.8e-22 108.6 154 35.1
Cpa.g.sc40.24 Carica papaya HOM05D004971 ORTHO05D006289 7.3e-20 102.1 53 83.0
Nitab4.5_0002165g0090 Nicotiana tabacum HOM05D004971 ORTHO05D006289 2.1e-19 100.5 57 80.7
Lalb_Chr24g0397371 Lupinus albus HOM05D004971 ORTHO05D006289 3.6e-19 99.8 139 41.7
Actinidia07401 Actinidia chinensis HOM05D004971 ORTHO05D006289 4.9e-16 89.4 56 73.2
MBI19_g42779_MAGBIO Magnolia biondii HOM05D004971 ORTHO05D006289 8.6e-13 78.6 166 30.7
MBI19_g24589_MAGBIO Magnolia biondii HOM05D004971 ORTHO05D006289 4.3e-12 76.3 195 29.7
Nitab4.5_0001706g0080 Nicotiana tabacum HOM05D004971 ORTHO05D006289 1.3e-08 64.7 29 96.6
FvH4_7g02600 Fragaria vesca HOM05D004971 ORTHO05D022553 2.9e-08 63.5 40 65.0
FvH4_7g02480 Fragaria vesca HOM05D004971 ORTHO05D022553 8.4e-08 62.0 38 65.8
MBI19_g24592_MAGBIO Magnolia biondii HOM05D004971 ORTHO05D006289 9.2e-07 58.5 38 57.9
CiPaw.05G218700 Carya illinoinensis HOM05D004971 ORTHO05D006289 4.6e-06 56.2 39 61.5


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