Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen05g026950 Solanum pennellii HOM05D003329 ORTHO05D006664 7.3e-116 421.0 289 100.0
Sopen05g011420 Solanum pennellii HOM05D003329 ORTHO05D006664 1.7e-72 276.9 296 72.6
Sopen12g026120 Solanum pennellii HOM05D000004 ORTHO05D006664 1.5e-68 263.8 269 57.6
Sopen10g024270 Solanum pennellii HOM05D003329 ORTHO05D006664 5.2e-53 212.2 232 58.2
Sopen05g018130 Solanum pennellii HOM05D003329 ORTHO05D006664 9.8e-36 154.8 207 50.2
PGSC0003DMG400036256 Solanum tuberosum HOM05D003329 ORTHO05D006664 2.1e-30 137.1 152 55.3
Solyc12g062227.1 Solanum lycopersicum HOM05D003329 ORTHO05D006664 4.6e-25 119.4 124 65.3
CAN.G178.9 Capsicum annuum HOM05D003329 ORTHO05D006664 1.7e-24 117.5 136 50.7
PGSC0003DMG400037928 Solanum tuberosum HOM05D003329 ORTHO05D006664 9.5e-23 111.7 92 68.5
Solyc04g050445.1 Solanum lycopersicum HOM05D003329 ORTHO05D006664 1.4e-21 107.8 110 71.8
Sopen04g021240 Solanum pennellii HOM05D000017 ORTHO05D000013 1.5e-20 104.4 76 64.5
PGSC0003DMG400034400 Solanum tuberosum HOM05D003329 ORTHO05D006664 1.7e-19 100.9 114 66.7
CAN.G78.125 Capsicum annuum HOM05D003329 ORTHO05D006664 2.2e-19 100.5 186 39.8
PGSC0003DMG400037742 Solanum tuberosum HOM05D003329 ORTHO05D006664 3.7e-19 99.8 61 88.5
CAN.G1799.5 Capsicum annuum HOM05D003329 ORTHO05D006664 8.3e-19 98.6 123 48.8
CAN.G65.137 Capsicum annuum HOM05D000017 ORTHO05D010801 5.4e-18 95.9 92 57.6
CAN.G907.5 Capsicum annuum HOM05D003329 ORTHO05D006664 3.9e-16 89.7 123 48.0
CAN.G625.83 Capsicum annuum HOM05D005540 ORTHO05D006932 1.5e-15 87.8 93 52.7
Nitab4.5_0000348g0070 Nicotiana tabacum HOM05D003329 ORTHO05D000013 1.4e-13 81.3 58 60.3
Nitab4.5_0000105g0230 Nicotiana tabacum HOM05D000017 ORTHO05D000013 1.5e-12 77.8 60 53.3
Sopen05g030950 Solanum pennellii HOM05D000017 ORTHO05D000013 2.0e-12 77.4 58 55.2
Sopen12g014770 Solanum pennellii HOM05D000017 ORTHO05D013101 2.6e-12 77.0 51 60.8
CAN.G821.5 Capsicum annuum HOM05D003329 ORTHO05D006664 1.3e-11 74.7 108 46.3
Sopen03g028620 Solanum pennellii HOM05D001851 ORTHO05D013101 1.7e-11 74.3 51 58.8
Sopen05g008290 Solanum pennellii HOM05D000002 ORTHO05D001349 1.7e-11 74.3 51 58.8
Sopen03g025320 Solanum pennellii HOM05D000017 ORTHO05D000013 2.9e-11 73.6 60 50.0
Sopen04g014920 Solanum pennellii HOM05D000017 ORTHO05D000013 2.9e-11 73.6 60 50.0
Sopen06g004260 Solanum pennellii HOM05D000017 ORTHO05D000013 2.9e-11 73.6 60 50.0
Sopen07g006850 Solanum pennellii HOM05D000017 ORTHO05D000013 2.9e-11 73.6 60 50.0
Sopen07g012470 Solanum pennellii HOM05D000017 ORTHO05D000013 2.9e-11 73.6 60 50.0
Sopen09g011110 Solanum pennellii HOM05D000017 ORTHO05D011910 2.9e-11 73.6 60 48.3
Sopen09g030880 Solanum pennellii HOM05D000017 ORTHO05D000013 2.9e-11 73.6 60 50.0
Sopen10g031980 Solanum pennellii HOM05D000017 ORTHO05D000013 2.9e-11 73.6 60 50.0
Sopen02g011340 Solanum pennellii HOM05D000017 ORTHO05D000013 3.8e-11 73.2 170 30.6
Sopen06g014720 Solanum pennellii HOM05D000017 ORTHO05D013101 6.4e-11 72.4 51 58.8
Sopen05g029250 Solanum pennellii HOM05D000017 ORTHO05D001349 8.4e-11 72.0 60 50.0
PGSC0003DMG400008529 Solanum tuberosum HOM05D003329 ORTHO05D006664 1.4e-10 71.2 53 73.6
Sopen09g007310 Solanum pennellii HOM05D000017 ORTHO05D009185 2.4e-10 70.5 60 50.0
Sopen01g006400 Solanum pennellii HOM05D000017 ORTHO05D000013 5.4e-10 69.3 51 56.9
PGSC0003DMG400022546 Solanum tuberosum HOM05D003329 ORTHO05D006664 5.4e-10 69.3 53 73.6
Nitab4.5_0002850g0060 Nicotiana tabacum HOM05D000017 ORTHO05D000013 7.1e-10 68.9 54 55.6
Nitab4.5_0001567g0070 Nicotiana tabacum HOM05D000017 ORTHO05D001349 9.3e-10 68.6 61 47.5
PGSC0003DMG400034347 Solanum tuberosum HOM05D003329 ORTHO05D006664 1.2e-09 68.2 98 49.0
Sopen04g015180 Solanum pennellii HOM05D000004 ORTHO05D011910 1.6e-09 67.8 60 45.0
Sopen08g001370 Solanum pennellii HOM05D000017 ORTHO05D000013 1.6e-09 67.8 60 45.0
Sopen09g011090 Solanum pennellii HOM05D000017 ORTHO05D009561 1.6e-09 67.8 60 45.0
Sopen09g015990 Solanum pennellii HOM05D000017 ORTHO05D000013 1.6e-09 67.8 60 45.0
Sopen11g013980 Solanum pennellii HOM05D000017 ORTHO05D009561 1.6e-09 67.8 60 45.0
Sopen11g026090 Solanum pennellii HOM05D000017 ORTHO05D000013 1.6e-09 67.8 60 45.0
Sopen12g005860 Solanum pennellii HOM05D000017 ORTHO05D000013 1.6e-09 67.8 60 45.0
Sopen01g026860 Solanum pennellii HOM05D000017 ORTHO05D000013 2.1e-09 67.4 58 46.6
Nitab4.5_0002244g0050 Nicotiana tabacum HOM05D000017 ORTHO05D000013 2.7e-09 67.0 47 57.4
Sopen02g010790 Solanum pennellii HOM05D000017 ORTHO05D009561 2.7e-09 67.0 60 45.0
Sopen05g012450 Solanum pennellii HOM05D000017 ORTHO05D009561 2.7e-09 67.0 59 45.8
Sopen06g017430 Solanum pennellii HOM05D000017 ORTHO05D000013 2.7e-09 67.0 60 45.0
Sopen10g013120 Solanum pennellii HOM05D000017 ORTHO05D000013 3.5e-09 66.6 60 43.3
Sopen05g012050 Solanum pennellii HOM05D000017 ORTHO05D000013 4.6e-09 66.2 60 43.3
Nitab4.5_0000239g0130 Nicotiana tabacum HOM05D000017 ORTHO05D000013 7.8e-09 65.5 59 50.8
Sopen02g009320 Solanum pennellii HOM05D000017 ORTHO05D011910 7.8e-09 65.5 60 45.0
Sopen02g014660 Solanum pennellii HOM05D000017 ORTHO05D011910 7.8e-09 65.5 60 45.0
Sopen03g017650 Solanum pennellii HOM05D000017 ORTHO05D000013 7.8e-09 65.5 43 60.5
Sopen05g004820 Solanum pennellii HOM05D000072 ORTHO05D011910 7.8e-09 65.5 60 45.0
Sopen07g020390 Solanum pennellii HOM05D000017 ORTHO05D011910 7.8e-09 65.5 60 45.0
Sopen08g008550 Solanum pennellii HOM05D004064 ORTHO05D011910 7.8e-09 65.5 60 45.0
Sopen11g024710 Solanum pennellii HOM05D000002 ORTHO05D000001 7.8e-09 65.5 60 43.3
Sopen05g008970 Solanum pennellii HOM05D004064 ORTHO05D011910 1.3e-08 64.7 59 45.8
Sopen05g016400 Solanum pennellii HOM05D000017 ORTHO05D011910 1.7e-08 64.3 60 45.0
Sopen12g016630 Solanum pennellii HOM05D000017 ORTHO05D000013 1.7e-08 64.3 184 31.0
Sopen10g005830 Solanum pennellii HOM05D000017 ORTHO05D011910 2.3e-08 63.9 63 44.4
Sopen11g010850 Solanum pennellii HOM05D000017 ORTHO05D009561 3.9e-08 63.2 57 43.9
Sopen12g026480 Solanum pennellii HOM05D000017 ORTHO05D009561 3.9e-08 63.2 60 45.0
PGR042G0573 Punica granatum HOM05D000017 ORTHO05D000013 5.1e-08 62.8 60 45.0
Nitab4.5_0006080g0030 Nicotiana tabacum HOM05D000017 ORTHO05D001349 6.6e-08 62.4 41 63.4
Sopen01g020720 Solanum pennellii HOM05D004064 ORTHO05D011910 6.6e-08 62.4 63 42.9
Sopen10g022390 Solanum pennellii HOM05D000017 ORTHO05D000013 6.6e-08 62.4 183 30.6
PGSC0003DMG400017483 Solanum tuberosum HOM05D000017 ORTHO05D009909 6.6e-08 62.4 142 34.5
CAN.G945.1 Capsicum annuum HOM05D002944 ORTHO05D003377 1.1e-07 61.6 99 40.4
Sopen10g017570 Solanum pennellii HOM05D000017 ORTHO05D009561 1.1e-07 61.6 60 41.7
Sopen04g022370 Solanum pennellii HOM05D000017 ORTHO05D011910 1.9e-07 60.8 60 41.7
Nitab4.5_0000092g0290 Nicotiana tabacum HOM05D003329 ORTHO05D006664 2.5e-07 60.5 125 37.6
Sopen05g013990 Solanum pennellii HOM05D000017 ORTHO05D009185 2.5e-07 60.5 181 29.3
Sopen12g011170 Solanum pennellii HOM05D000017 ORTHO05D009561 3.3e-07 60.1 60 40.0
THA.LOC104803158 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 3.3e-07 60.1 60 46.7
Nitab4.5_0000529g0050 Nicotiana tabacum HOM05D003329 ORTHO05D006664 4.3e-07 59.7 116 37.1
Sopen01g027250 Solanum pennellii HOM05D000017 ORTHO05D000013 4.3e-07 59.7 60 43.3
Sopen02g003610 Solanum pennellii HOM05D000017 ORTHO05D000013 4.3e-07 59.7 60 43.3
Sopen02g013230 Solanum pennellii HOM05D000017 ORTHO05D000013 4.3e-07 59.7 60 43.3
Sopen02g036070 Solanum pennellii HOM05D000017 ORTHO05D000013 4.3e-07 59.7 60 43.3
Sopen04g019600 Solanum pennellii HOM05D000017 ORTHO05D000013 4.3e-07 59.7 60 43.3
Sopen04g025160 Solanum pennellii HOM05D000017 ORTHO05D000013 4.3e-07 59.7 60 43.3
Sopen05g015150 Solanum pennellii HOM05D000017 ORTHO05D000013 4.3e-07 59.7 60 43.3
Sopen05g025220 Solanum pennellii HOM05D000017 ORTHO05D000013 4.3e-07 59.7 60 43.3
Sopen06g011350 Solanum pennellii HOM05D000017 ORTHO05D009185 4.3e-07 59.7 60 43.3
Sopen08g008450 Solanum pennellii HOM05D000017 ORTHO05D000013 4.3e-07 59.7 60 43.3
Sopen08g012130 Solanum pennellii HOM05D000017 ORTHO05D000013 4.3e-07 59.7 60 43.3
Sopen08g021210 Solanum pennellii HOM05D000017 ORTHO05D000013 4.3e-07 59.7 60 43.3
Sopen08g030170 Solanum pennellii HOM05D000017 ORTHO05D000013 4.3e-07 59.7 60 43.3
Sopen09g020620 Solanum pennellii HOM05D000017 ORTHO05D000013 4.3e-07 59.7 60 43.3
Sopen10g014100 Solanum pennellii HOM05D000017 ORTHO05D000013 4.3e-07 59.7 57 42.1
Sopen10g027160 Solanum pennellii HOM05D000017 ORTHO05D000013 4.3e-07 59.7 60 43.3
Sopen12g021170 Solanum pennellii HOM05D000017 ORTHO05D000013 4.3e-07 59.7 60 43.3
Sopen12g026920 Solanum pennellii HOM05D000017 ORTHO05D000013 4.3e-07 59.7 60 43.3
Nitab4.5_0009435g0040 Nicotiana tabacum HOM05D003329 ORTHO05D006664 9.6e-07 58.5 125 36.8
Sopen08g010420 Solanum pennellii HOM05D000017 ORTHO05D009561 9.6e-07 58.5 78 39.7
Sopen10g021400 Solanum pennellii HOM05D000017 ORTHO05D009561 1.6e-06 57.8 51 47.1
PGSC0003DMG400044674 Solanum tuberosum HOM05D052737 ORTHO05D051087 1.6e-06 57.8 38 52.6
Nitab4.5_0001759g0100 Nicotiana tabacum HOM05D003329 ORTHO05D006664 2.1e-06 57.4 125 36.8
Nitab4.5_0012297g0030 Nicotiana tabacum HOM05D000017 ORTHO05D000308 2.1e-06 57.4 62 43.5
Sopen10g006650 Solanum pennellii HOM05D000017 ORTHO05D000013 2.1e-06 57.4 59 44.1
Sopen12g020620 Solanum pennellii HOM05D000017 ORTHO05D000013 2.8e-06 57.0 60 41.7
PGSC0003DMG400043322 Solanum tuberosum HOM05D003329 ORTHO05D398053 2.8e-06 57.0 62 64.5
Nitab4.5_0000189g0160 Nicotiana tabacum HOM05D000017 ORTHO05D000013 3.6e-06 56.6 57 42.1
Nitab4.5_0000682g0030 Nicotiana tabacum HOM05D003329 ORTHO05D006664 3.6e-06 56.6 126 35.7
Peaxi162Scf00127g00194 Petunia axillaris HOM05D003329 ORTHO05D001349 3.6e-06 56.6 119 38.7
Peaxi162Scf00825g00013 Petunia axillaris HOM05D003329 ORTHO05D001349 3.6e-06 56.6 119 38.7
Peaxi162Scf00839g00021 Petunia axillaris HOM05D003329 ORTHO05D001349 3.6e-06 56.6 119 38.7
AUR62042663 Chenopodium quinoa HOM05D000107 ORTHO05D000062 4.8e-06 56.2 58 44.8
ECA236G4679 Erigeron canadensis HOM05D000017 ORTHO05D000013 4.8e-06 56.2 60 45.0
Nitab4.5_0002330g0170 Nicotiana tabacum HOM05D003329 ORTHO05D006664 4.8e-06 56.2 125 36.0
CAN.G26.38 Capsicum annuum HOM05D000208 ORTHO05D000130 6.2e-06 55.8 41 56.1
Sopen07g022780 Solanum pennellii HOM05D000017 ORTHO05D000013 6.2e-06 55.8 60 40.0
Nitab4.5_0000543g0190 Nicotiana tabacum HOM05D000017 ORTHO05D000308 8.1e-06 55.5 79 34.2
Peaxi162Scf00476g00629 Petunia axillaris HOM05D000017 ORTHO05D000308 8.1e-06 55.5 74 36.5
Solyc03g059315.1 Solanum lycopersicum HOM05D000017 ORTHO05D000308 8.1e-06 55.5 61 41.0


User provided reference genes

Program Settings