Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen05g026070 Solanum pennellii HOM05D007930 ORTHO05D007166 3.2e-87 325.1 168 100.0
Sopen12g018140 Solanum pennellii HOM05D007930 ORTHO05D007166 5.8e-73 277.7 159 88.7
Sopen06g013750 Solanum pennellii HOM05D007930 ORTHO05D007166 5.5e-71 271.2 158 86.7
Sopen01g016030 Solanum pennellii HOM05D000014 ORTHO05D000016 1.5e-68 263.1 159 85.5
Sopen07g016830 Solanum pennellii HOM05D007930 ORTHO05D007166 3.3e-68 261.9 146 91.8
Sopen05g019850 Solanum pennellii HOM05D007930 ORTHO05D007166 1.6e-67 259.6 154 86.4
Sopen10g014360 Solanum pennellii HOM05D007930 ORTHO05D007166 1.6e-67 259.6 150 88.0
Sopen04g019100 Solanum pennellii HOM05D007930 ORTHO05D007166 1.8e-66 256.1 163 82.8
Sopen08g008350 Solanum pennellii HOM05D007930 ORTHO05D007166 6.9e-66 254.2 146 89.0
Sopen08g007710 Solanum pennellii HOM05D007930 ORTHO05D007166 4.5e-65 251.5 150 85.3
Sopen00g009310 Solanum pennellii HOM05D007930 ORTHO05D007166 2.9e-64 248.8 163 79.8
Sopen08g009350 Solanum pennellii HOM05D007930 ORTHO05D007166 2.9e-64 248.8 142 89.4
Sopen11g018950 Solanum pennellii HOM05D000107 ORTHO05D000062 5.0e-64 248.1 155 83.9
PGSC0003DMG400004241 Solanum tuberosum HOM05D007930 ORTHO05D007166 3.2e-63 245.4 144 86.1
Sopen08g011060 Solanum pennellii HOM05D007930 ORTHO05D007166 2.1e-62 242.7 148 83.8
Sopen05g024480 Solanum pennellii HOM05D007930 ORTHO05D007166 1.8e-61 239.6 148 83.1
Sopen02g001050 Solanum pennellii HOM05D007930 ORTHO05D007166 3.0e-61 238.8 150 82.0
Sopen01g007980 Solanum pennellii HOM05D007930 ORTHO05D007166 8.7e-61 237.3 135 89.6
Sopen11g021520 Solanum pennellii HOM05D007930 ORTHO05D007166 1.5e-60 236.5 144 86.1
Sopen03g013860 Solanum pennellii HOM05D000004 ORTHO05D007166 5.3e-58 228.0 146 81.5
Sopen08g014940 Solanum pennellii HOM05D000004 ORTHO05D007166 5.3e-58 228.0 150 78.7
Sopen05g025930 Solanum pennellii HOM05D007930 ORTHO05D007166 1.2e-57 226.9 149 79.9
Sopen10g018630 Solanum pennellii HOM05D007930 ORTHO05D007166 1.5e-57 226.5 163 74.2
Sopen10g009350 Solanum pennellii HOM05D007930 ORTHO05D007166 5.0e-56 221.5 165 70.3
Sopen04g018890 Solanum pennellii HOM05D007930 ORTHO05D007166 8.5e-56 220.7 169 69.2
Sopen03g018540 Solanum pennellii HOM05D007930 ORTHO05D007166 5.5e-55 218.0 123 90.2
Sopen07g008330 Solanum pennellii HOM05D007930 ORTHO05D007166 1.6e-54 216.5 169 68.0
Sopen06g016400 Solanum pennellii HOM05D007930 ORTHO05D007166 7.9e-54 214.2 164 68.3
Sopen07g010120 Solanum pennellii HOM05D000014 ORTHO05D000016 3.4e-49 198.7 115 87.8
Sopen11g012950 Solanum pennellii HOM05D007930 ORTHO05D007166 5.9e-49 198.0 116 87.1
Sopen03g014010 Solanum pennellii HOM05D000014 ORTHO05D000016 2.5e-47 192.6 109 89.9
PGSC0003DMG400041847 Solanum tuberosum HOM05D007930 ORTHO05D007166 2.3e-45 186.0 158 65.2
Sopen09g008030 Solanum pennellii HOM05D007930 ORTHO05D007166 2.0e-44 183.0 142 69.0
PGSC0003DMG400042507 Solanum tuberosum HOM05D007930 ORTHO05D007166 3.3e-44 182.2 109 84.4
PGSC0003DMG400046611 Solanum tuberosum HOM05D007930 ORTHO05D007166 5.3e-42 174.9 127 74.0
Sopen02g002760 Solanum pennellii HOM05D007930 ORTHO05D007166 3.5e-41 172.2 102 89.2
Sopen12g015810 Solanum pennellii HOM05D007930 ORTHO05D007166 5.5e-39 164.9 97 85.6
Sopen01g021020 Solanum pennellii HOM05D000107 ORTHO05D009932 1.6e-38 163.3 104 80.8
PGSC0003DMG400043538 Solanum tuberosum HOM05D007930 ORTHO05D007166 6.1e-38 161.4 112 77.7
Sopen02g002790 Solanum pennellii HOM05D007930 ORTHO05D007166 8.0e-38 161.0 97 84.5
Sopen12g016200 Solanum pennellii HOM05D007930 ORTHO05D007166 4.0e-37 158.7 99 79.8
Sopen08g014730 Solanum pennellii HOM05D007930 ORTHO05D007166 5.2e-37 158.3 112 75.0
PGSC0003DMG400045026 Solanum tuberosum HOM05D007930 ORTHO05D007166 8.5e-32 141.0 113 66.4
Sopen09g024560 Solanum pennellii HOM05D000107 ORTHO05D000062 7.2e-31 137.9 121 62.8
PGSC0003DMG400044598 Solanum tuberosum HOM05D007930 ORTHO05D007166 2.7e-30 136.0 93 78.5
Sopen04g011930 Solanum pennellii HOM05D007930 ORTHO05D007166 1.3e-27 127.1 70 91.4
Sopen07g010680 Solanum pennellii HOM05D007930 ORTHO05D007166 1.3e-27 127.1 156 50.6
PGSC0003DMG400009722 Solanum tuberosum HOM05D007930 ORTHO05D007166 1.8e-26 123.2 77 79.2
Lj1g0024910 Lotus japonicus HOM05D004615 ORTHO05D007166 1.0e-24 117.5 152 41.4
Sopen04g019050 Solanum pennellii HOM05D000004 ORTHO05D000002 2.2e-24 116.3 69 84.1
PGSC0003DMG400046823 Solanum tuberosum HOM05D007930 ORTHO05D007166 2.1e-22 109.8 62 88.7
Sopen03g016440 Solanum pennellii HOM05D007930 ORTHO05D007166 4.7e-22 108.6 84 71.4
Lj2g0009854 Lotus japonicus HOM05D008859 ORTHO05D007166 6.8e-21 104.8 154 39.0
PGSC0003DMG400044440 Solanum tuberosum HOM05D007930 ORTHO05D007166 8.8e-21 104.4 109 54.1
Psat3g053800 Pisum sativum HOM05D009811 ORTHO05D007166 5.7e-20 101.7 138 42.0
Phvul.L001738 Phaseolus vulgaris HOM05D008859 ORTHO05D007166 1.7e-19 100.1 143 42.0
Psat3g052720 Pisum sativum HOM05D009811 ORTHO05D007166 2.2e-19 99.8 161 37.9
Sopen01g024790 Solanum pennellii HOM05D007930 ORTHO05D007166 2.8e-19 99.4 84 66.7
Psat4g079480 Pisum sativum HOM05D009811 ORTHO05D007166 1.8e-18 96.7 134 41.8
TPR.G25563 Trifolium pratense HOM05D000107 ORTHO05D000062 3.1e-18 95.9 147 37.4
PGSC0003DMG400038760 Solanum tuberosum HOM05D007930 ORTHO05D007166 7.0e-18 94.7 65 73.8
Ca_13632_v3 Cicer arietinum L. HOM05D008859 ORTHO05D007166 1.6e-17 93.6 106 48.1
PGSC0003DMG400046364 Solanum tuberosum HOM05D007930 ORTHO05D007166 3.5e-17 92.4 101 49.5
Psat5g236880 Pisum sativum HOM05D008859 ORTHO05D007166 2.3e-16 89.7 165 34.5
Psat7g204000 Pisum sativum HOM05D008859 ORTHO05D007166 2.3e-16 89.7 165 34.5
Sopen08g007420 Solanum pennellii HOM05D007930 ORTHO05D007166 1.5e-15 87.0 50 86.0
TPR.G7595 Trifolium pratense HOM05D008859 ORTHO05D007166 1.9e-15 86.7 108 45.4
Ca_22878_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 4.3e-15 85.5 169 34.9
Psat5g270240 Pisum sativum HOM05D008859 ORTHO05D007166 7.3e-15 84.7 167 32.3
Psat5g082960 Pisum sativum HOM05D008859 ORTHO05D007166 9.5e-15 84.3 102 43.1
Psat7g163400 Pisum sativum HOM05D008859 ORTHO05D007166 1.6e-14 83.6 157 33.8
Psat7g230640 Pisum sativum HOM05D008859 ORTHO05D007166 2.1e-14 83.2 114 41.2
Lj3g0027022 Lotus japonicus HOM05D004615 ORTHO05D000385 4.7e-14 82.0 103 40.8
Sopen01g009500 Solanum pennellii HOM05D007930 ORTHO05D007166 4.7e-14 82.0 96 50.0
Ca_14008_v3 Cicer arietinum L. HOM05D008859 ORTHO05D007166 8.0e-14 81.3 164 34.1
PGSC0003DMG400047111 Solanum tuberosum HOM05D007930 ORTHO05D007166 3.0e-13 79.3 51 76.5
Sopen12g025620 Solanum pennellii HOM05D007930 ORTHO05D012342 6.8e-13 78.2 46 82.6
Ca_05541_v3 Cicer arietinum L. HOM05D008859 ORTHO05D007166 1.2e-12 77.4 154 33.8
arahy.Tifrunner.gnm1.ann1.AC3I93 Arachis hypogaea HOM05D007930 ORTHO05D011783 5.7e-12 75.1 133 36.8
Ca_03071_v3 Cicer arietinum L. HOM05D008859 ORTHO05D007166 5.7e-12 75.1 134 37.3
Sopen12g018720 Solanum pennellii HOM05D007930 ORTHO05D007166 7.5e-12 74.7 45 77.8
Sopen01g021130 Solanum pennellii HOM05D007930 ORTHO05D007166 2.2e-11 73.2 139 35.3
Sopen09g017090 Solanum pennellii HOM05D007930 ORTHO05D009932 6.4e-11 71.6 54 70.4
Medtr6g043310 Medicago truncatula HOM05D008859 ORTHO05D007166 8.3e-11 71.2 141 33.3
Lj3g0009883 Lotus japonicus HOM05D008859 ORTHO05D007166 1.4e-10 70.5 108 37.0
PGSC0003DMG400043533 Solanum tuberosum HOM05D007930 ORTHO05D007166 4.1e-10 68.9 37 91.9
PGSC0003DMG400023207 Solanum tuberosum HOM05D007930 ORTHO05D003213 7.0e-10 68.2 94 45.7
Phvul.010G109450 Phaseolus vulgaris HOM05D008859 ORTHO05D007166 1.6e-09 67.0 115 39.1
Medtr3g055517 Medicago truncatula HOM05D007930 ORTHO05D030188 2.0e-09 66.6 83 41.0
Sopen11g018790 Solanum pennellii HOM05D007930 ORTHO05D007166 5.9e-09 65.1 36 80.6
Psat6g116840 Pisum sativum HOM05D008859 ORTHO05D007166 7.8e-09 64.7 114 34.2
Sopen12g011410 Solanum pennellii HOM05D007930 ORTHO05D007166 7.8e-09 64.7 37 86.5
Sopen02g002150 Solanum pennellii HOM05D000107 ORTHO05D000062 5.0e-08 62.0 33 87.9
TPR.G18975 Trifolium pratense HOM05D007930 ORTHO05D030188 5.0e-08 62.0 83 39.8
Psat1g076560 Pisum sativum HOM05D009811 ORTHO05D007166 8.6e-08 61.2 96 41.7
PGSC0003DMG400014072 Solanum tuberosum HOM05D007930 ORTHO05D007166 8.6e-08 61.2 38 78.9
Lj2g0010843 Lotus japonicus HOM05D004615 ORTHO05D000385 1.1e-07 60.8 76 40.8
Sopen11g023140 Solanum pennellii HOM05D000107 ORTHO05D000062 1.5e-07 60.5 38 76.3
Psat5g249440 Pisum sativum HOM05D009811 ORTHO05D007166 3.3e-07 59.3 101 33.7
Oeu023404.2 Olea europaea HOM05D001309 ORTHO05D005970 4.3e-07 58.9 123 32.5
TPR.G17520 Trifolium pratense HOM05D008859 ORTHO05D007166 4.3e-07 58.9 79 36.7
Ca_07509_v3 Cicer arietinum L. HOM05D008859 ORTHO05D007166 2.8e-06 56.2 113 33.6
Ah.02g122150 Amaranthus hybridus HOM05D004615 ORTHO05D000385 3.6e-06 55.8 99 39.4
Medtr6g088780 Medicago truncatula HOM05D008859 ORTHO05D007166 3.6e-06 55.8 112 31.2
Lsat_1_v5_gn_9_120520 Lactuca sativa HOM05D001309 ORTHO05D005970 4.7e-06 55.5 120 32.5
Glyma.06G231400 Glycine max HOM05D008859 ORTHO05D007166 6.2e-06 55.1 77 40.3
vmacro01714 Vaccinium macrocarpon HOM05D005763 ORTHO05D005970 6.2e-06 55.1 124 33.1


User provided reference genes

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