Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen05g025930 Solanum pennellii HOM05D007930 ORTHO05D007166 6.7e-221 770.4 395 100.0
Sopen10g014360 Solanum pennellii HOM05D007930 ORTHO05D007166 2.0e-172 609.4 475 71.2
Sopen08g008350 Solanum pennellii HOM05D007930 ORTHO05D007166 9.9e-156 553.9 449 69.3
Sopen03g014010 Solanum pennellii HOM05D000014 ORTHO05D000016 6.2e-142 508.1 441 65.5
Sopen08g011060 Solanum pennellii HOM05D007930 ORTHO05D007166 9.0e-141 504.2 423 69.0
Sopen08g007710 Solanum pennellii HOM05D007930 ORTHO05D007166 1.0e-139 500.7 387 72.9
Sopen02g001050 Solanum pennellii HOM05D007930 ORTHO05D007166 5.5e-138 495.0 387 72.6
Sopen11g021520 Solanum pennellii HOM05D007930 ORTHO05D007166 5.5e-138 495.0 415 70.1
Sopen12g015810 Solanum pennellii HOM05D007930 ORTHO05D007166 1.1e-135 487.3 569 53.3
Sopen08g014940 Solanum pennellii HOM05D000004 ORTHO05D007166 1.6e-134 483.4 432 65.7
Sopen03g018540 Solanum pennellii HOM05D007930 ORTHO05D007166 1.2e-124 450.7 350 73.1
Sopen12g016200 Solanum pennellii HOM05D007930 ORTHO05D007166 1.5e-124 450.3 394 67.3
Sopen08g009350 Solanum pennellii HOM05D007930 ORTHO05D007166 9.1e-117 424.5 366 68.6
Sopen12g018140 Solanum pennellii HOM05D007930 ORTHO05D007166 2.1e-113 413.3 405 59.5
Sopen01g007980 Solanum pennellii HOM05D007930 ORTHO05D007166 2.3e-112 409.8 370 65.1
PGSC0003DMG400043538 Solanum tuberosum HOM05D007930 ORTHO05D007166 2.0e-111 406.8 460 53.7
Sopen02g002760 Solanum pennellii HOM05D007930 ORTHO05D007166 1.7e-110 403.7 329 71.7
PGSC0003DMG400046611 Solanum tuberosum HOM05D007930 ORTHO05D007166 1.9e-98 363.6 386 56.5
Sopen05g019850 Solanum pennellii HOM05D007930 ORTHO05D007166 3.4e-95 352.8 391 57.8
Sopen04g018890 Solanum pennellii HOM05D007930 ORTHO05D007166 2.4e-93 346.7 520 44.4
PGSC0003DMG400045026 Solanum tuberosum HOM05D007930 ORTHO05D007166 7.0e-93 345.1 393 54.2
PGSC0003DMG400042507 Solanum tuberosum HOM05D007930 ORTHO05D007166 2.5e-90 336.7 283 66.1
Sopen07g016830 Solanum pennellii HOM05D007930 ORTHO05D007166 1.6e-89 334.0 344 59.6
Sopen08g007420 Solanum pennellii HOM05D007930 ORTHO05D007166 1.2e-87 327.8 361 57.1
PGSC0003DMG400004241 Solanum tuberosum HOM05D007930 ORTHO05D007166 1.1e-85 321.2 469 45.6
Sopen04g019100 Solanum pennellii HOM05D007930 ORTHO05D007166 7.0e-85 318.5 255 69.8
Sopen05g024480 Solanum pennellii HOM05D007930 ORTHO05D007166 1.0e-83 314.7 316 59.2
Sopen08g014730 Solanum pennellii HOM05D007930 ORTHO05D007166 5.2e-80 302.4 408 49.0
PGSC0003DMG400041847 Solanum tuberosum HOM05D007930 ORTHO05D007166 2.7e-76 290.0 389 49.1
Sopen03g013860 Solanum pennellii HOM05D000004 ORTHO05D007166 1.9e-74 283.9 206 73.8
Sopen11g021650 Solanum pennellii HOM05D007930 ORTHO05D007166 1.1e-72 278.1 156 94.2
Sopen02g002790 Solanum pennellii HOM05D007930 ORTHO05D007166 5.2e-72 275.8 324 55.6
Sopen06g013750 Solanum pennellii HOM05D007930 ORTHO05D007166 4.3e-66 256.1 166 80.1
Sopen03g016440 Solanum pennellii HOM05D007930 ORTHO05D007166 1.4e-64 251.1 297 52.5
PGSC0003DMG400042050 Solanum tuberosum HOM05D007930 ORTHO05D007166 1.3e-62 244.6 156 84.6
Sopen01g016030 Solanum pennellii HOM05D000014 ORTHO05D000016 8.3e-62 241.9 165 78.2
Sopen11g018950 Solanum pennellii HOM05D000107 ORTHO05D000062 9.2e-61 238.4 232 62.5
Sopen07g008330 Solanum pennellii HOM05D007930 ORTHO05D007166 6.0e-60 235.7 272 51.1
Sopen09g024560 Solanum pennellii HOM05D000107 ORTHO05D000062 1.7e-59 234.2 517 35.2
Sopen00g009310 Solanum pennellii HOM05D007930 ORTHO05D007166 1.1e-58 231.5 165 75.2
Sopen11g012950 Solanum pennellii HOM05D007930 ORTHO05D007166 5.6e-58 229.2 128 89.8
Sopen07g010120 Solanum pennellii HOM05D000014 ORTHO05D000016 2.8e-57 226.9 127 89.8
Sopen05g026070 Solanum pennellii HOM05D007930 ORTHO05D007166 3.6e-57 226.5 149 79.9
PGSC0003DMG400036502 Solanum tuberosum HOM05D007930 ORTHO05D007166 1.8e-56 224.2 156 78.8
Sopen05g013740 Solanum pennellii HOM05D007930 ORTHO05D007166 4.4e-55 219.5 155 78.7
PGSC0003DMG400014072 Solanum tuberosum HOM05D007930 ORTHO05D007166 1.9e-53 214.2 251 55.4
Sopen10g018630 Solanum pennellii HOM05D007930 ORTHO05D007166 4.6e-52 209.5 165 69.7
PGSC0003DMG400043168 Solanum tuberosum HOM05D007930 ORTHO05D007166 3.0e-51 206.8 152 74.3
PGSC0003DMG400045641 Solanum tuberosum HOM05D007930 ORTHO05D007166 5.6e-50 202.6 152 73.0
Sopen01g021020 Solanum pennellii HOM05D000107 ORTHO05D009932 1.5e-47 194.5 123 82.1
Sopen10g009350 Solanum pennellii HOM05D007930 ORTHO05D007166 6.4e-46 189.1 166 63.9
Sopen01g024790 Solanum pennellii HOM05D007930 ORTHO05D007166 2.4e-45 187.2 290 45.2
PGSC0003DMG400042482 Solanum tuberosum HOM05D007930 ORTHO05D007166 2.4e-45 187.2 129 79.1
Sopen09g008030 Solanum pennellii HOM05D007930 ORTHO05D007166 2.7e-44 183.7 173 60.1
PGSC0003DMG400045533 Solanum tuberosum HOM05D007930 ORTHO05D007166 5.1e-43 179.5 135 72.6
PGSC0003DMG400045984 Solanum tuberosum HOM05D007930 ORTHO05D007166 2.5e-42 177.2 157 64.3
Sopen04g011930 Solanum pennellii HOM05D007930 ORTHO05D007166 3.3e-42 176.8 163 61.3
PGSC0003DMG400037542 Solanum tuberosum HOM05D007930 ORTHO05D007166 4.3e-42 176.4 105 89.5
Sopen01g007080 Solanum pennellii HOM05D007930 ORTHO05D000062 1.6e-41 174.5 147 68.0
Sopen06g016400 Solanum pennellii HOM05D007930 ORTHO05D007166 1.4e-40 171.4 150 63.3
Sopen09g017090 Solanum pennellii HOM05D007930 ORTHO05D009932 1.4e-40 171.4 92 98.9
Sopen04g019050 Solanum pennellii HOM05D000004 ORTHO05D000002 8.7e-35 152.1 194 51.5
PGSC0003DMG400046364 Solanum tuberosum HOM05D007930 ORTHO05D007166 2.5e-34 150.6 241 39.4
Sopen07g010680 Solanum pennellii HOM05D007930 ORTHO05D007166 1.4e-29 134.8 125 59.2
PGSC0003DMG400044598 Solanum tuberosum HOM05D007930 ORTHO05D007166 3.2e-29 133.7 106 69.8
PGSC0003DMG400044440 Solanum tuberosum HOM05D007930 ORTHO05D007166 1.8e-27 127.9 126 57.9
PGSC0003DMG400046823 Solanum tuberosum HOM05D007930 ORTHO05D007166 1.5e-26 124.8 299 37.1
Lj2g0009854 Lotus japonicus HOM05D008859 ORTHO05D007166 4.8e-25 119.8 301 30.2
Psat7g230640 Pisum sativum HOM05D008859 ORTHO05D007166 1.0e-22 112.1 207 35.3
Lj1g0024910 Lotus japonicus HOM05D004615 ORTHO05D007166 1.7e-22 111.3 300 29.7
Psat5g270240 Pisum sativum HOM05D008859 ORTHO05D007166 6.1e-20 102.8 239 31.4
Psat5g236880 Pisum sativum HOM05D008859 ORTHO05D007166 1.0e-19 102.1 282 29.4
Psat7g204000 Pisum sativum HOM05D008859 ORTHO05D007166 1.0e-19 102.1 282 29.4
Phvul.L001738 Phaseolus vulgaris HOM05D008859 ORTHO05D007166 1.8e-19 101.3 282 31.6
TPR.G7595 Trifolium pratense HOM05D008859 ORTHO05D007166 3.3e-18 97.1 254 30.3
PGSC0003DMG400039419 Solanum tuberosum HOM05D007930 ORTHO05D007166 1.6e-17 94.7 66 65.2
Sopen12g018720 Solanum pennellii HOM05D007930 ORTHO05D007166 6.3e-17 92.8 59 76.3
PGSC0003DMG400009722 Solanum tuberosum HOM05D007930 ORTHO05D007166 1.4e-16 91.7 166 38.6
Sopen01g009500 Solanum pennellii HOM05D007930 ORTHO05D007166 1.0e-14 85.5 51 76.5
PGSC0003DMG400043533 Solanum tuberosum HOM05D007930 ORTHO05D007166 6.5e-14 82.8 62 71.0
Medtr5g061300 Medicago truncatula HOM05D004615 ORTHO05D000385 8.5e-14 82.4 288 27.1
Sopen01g021130 Solanum pennellii HOM05D007930 ORTHO05D007166 1.9e-13 81.3 112 45.5
Ca_22878_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 2.5e-13 80.9 260 30.0
Psat4g079480 Pisum sativum HOM05D009811 ORTHO05D007166 2.5e-13 80.9 167 34.7
TPR.G25563 Trifolium pratense HOM05D000107 ORTHO05D000062 2.5e-13 80.9 149 34.2
Lj3g0027022 Lotus japonicus HOM05D004615 ORTHO05D000385 5.5e-13 79.7 349 25.5
PGSC0003DMG400023207 Solanum tuberosum HOM05D007930 ORTHO05D003213 7.2e-13 79.3 94 52.1
arahy.Tifrunner.gnm1.ann1.AC3I93 Arachis hypogaea HOM05D007930 ORTHO05D011783 1.2e-12 78.6 160 35.0
Solyc02g081085.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 2.7e-12 77.4 147 29.9
Psat3g052720 Pisum sativum HOM05D009811 ORTHO05D007166 7.9e-12 75.9 140 34.3
Psat3g053800 Pisum sativum HOM05D009811 ORTHO05D007166 7.9e-12 75.9 127 37.0
Psat7g163400 Pisum sativum HOM05D008859 ORTHO05D007166 1.0e-11 75.5 180 32.2
Sopen03g010950 Solanum pennellii HOM05D008041 ORTHO05D000385 1.0e-11 75.5 177 28.2
Ca_03071_v3 Cicer arietinum L. HOM05D008859 ORTHO05D007166 1.4e-11 75.1 138 39.9
Ca_14008_v3 Cicer arietinum L. HOM05D008859 ORTHO05D007166 5.1e-11 73.2 183 33.9
Medtr3g055517 Medicago truncatula HOM05D007930 ORTHO05D030188 5.1e-11 73.2 86 41.9
Ca_05541_v3 Cicer arietinum L. HOM05D008859 ORTHO05D007166 6.7e-11 72.8 183 32.8
Sopen01g007850 Solanum pennellii HOM05D008041 ORTHO05D000385 8.8e-11 72.4 177 27.1
Sopen03g012270 Solanum pennellii HOM05D008041 ORTHO05D000385 8.8e-11 72.4 177 27.1
Sopen04g017170 Solanum pennellii HOM05D008041 ORTHO05D000385 8.8e-11 72.4 177 27.1
Sopen07g025660 Solanum pennellii HOM05D008041 ORTHO05D000385 8.8e-11 72.4 177 27.1
Sopen09g017170 Solanum pennellii HOM05D008041 ORTHO05D000385 8.8e-11 72.4 177 27.1
Sopen12g016000 Solanum pennellii HOM05D008041 ORTHO05D000385 8.8e-11 72.4 177 27.1
PGSC0003DMG400038760 Solanum tuberosum HOM05D007930 ORTHO05D007166 1.5e-10 71.6 70 55.7
Sopen12g011410 Solanum pennellii HOM05D007930 ORTHO05D007166 2.5e-10 70.9 56 64.3
Psat5g082960 Pisum sativum HOM05D008859 ORTHO05D007166 3.3e-10 70.5 96 42.7
arahy.Tifrunner.gnm1.ann1.5MEJ54 Arachis hypogaea HOM05D010482 ORTHO05D000385 4.3e-10 70.1 184 26.1
Psat6g116840 Pisum sativum HOM05D008859 ORTHO05D007166 7.4e-10 69.3 135 32.6
Sopen02g002150 Solanum pennellii HOM05D000107 ORTHO05D000062 1.3e-09 68.6 205 32.2
TPR.G18975 Trifolium pratense HOM05D007930 ORTHO05D030188 1.3e-09 68.6 83 41.0
Phvul.010G109450 Phaseolus vulgaris HOM05D008859 ORTHO05D007166 1.7e-09 68.2 153 33.3
Sopen11g018790 Solanum pennellii HOM05D007930 ORTHO05D007166 3.7e-09 67.0 36 83.3
Medtr6g043310 Medicago truncatula HOM05D008859 ORTHO05D007166 4.8e-09 66.6 160 31.9
PGSC0003DMG400047111 Solanum tuberosum HOM05D007930 ORTHO05D007166 4.8e-09 66.6 110 40.0
arahy.Tifrunner.gnm1.ann1.CXU7YK Arachis hypogaea HOM05D010482 ORTHO05D000385 6.3e-09 66.2 194 25.3
Lj3g0009883 Lotus japonicus HOM05D008859 ORTHO05D007166 8.2e-09 65.9 114 34.2
PGSC0003DMG400045048 Solanum tuberosum HOM05D007930 ORTHO05D007166 8.2e-09 65.9 46 69.6
Solyc10g061845.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 1.4e-08 65.1 202 24.8
Sopen11g023140 Solanum pennellii HOM05D000107 ORTHO05D000062 1.4e-08 65.1 155 38.1
Psat5g249440 Pisum sativum HOM05D009811 ORTHO05D007166 1.8e-08 64.7 74 45.9
Solyc05g150139.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 1.8e-08 64.7 152 27.6
Sopen01g006470 Solanum pennellii HOM05D008041 ORTHO05D000385 1.8e-08 64.7 180 25.0
CAN.G537.10 Capsicum annuum HOM05D007930 ORTHO05D007166 2.4e-08 64.3 67 49.3
TPR.G17520 Trifolium pratense HOM05D008859 ORTHO05D007166 4.1e-08 63.5 56 44.6
Medtr6g088780 Medicago truncatula HOM05D008859 ORTHO05D007166 6.9e-08 62.8 123 34.1
Ca_13632_v3 Cicer arietinum L. HOM05D008859 ORTHO05D007166 9.1e-08 62.4 346 25.7
Sopen07g020910 Solanum pennellii HOM05D008041 ORTHO05D000385 2.0e-07 61.2 179 24.0
arahy.Tifrunner.gnm1.ann1.SC3PTI Arachis hypogaea HOM05D010482 ORTHO05D000385 4.5e-07 60.1 205 24.4
Ca_07509_v3 Cicer arietinum L. HOM05D008859 ORTHO05D007166 5.9e-07 59.7 113 35.4
PSO541G0666 Papaver somniferum HOM05D008576 ORTHO05D000385 1.0e-06 58.9 192 27.6
EL10Ac3g06149 Beta vulgaris HOM05D004615 ORTHO05D000385 1.3e-06 58.5 183 27.3
EL10Ac9g21235 Beta vulgaris HOM05D004615 ORTHO05D000385 1.3e-06 58.5 183 27.3
PSO349G0081 Papaver somniferum HOM05D001309 ORTHO05D000385 1.7e-06 58.2 271 22.1
arahy.Tifrunner.gnm1.ann1.U7U33W Arachis hypogaea HOM05D010482 ORTHO05D000385 2.2e-06 57.8 198 22.2
EL10Ac2g03424 Beta vulgaris HOM05D004615 ORTHO05D000385 3.8e-06 57.0 183 27.3
MBI11_g30647_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 6.5e-06 56.2 253 23.7
PSO541G0763 Papaver somniferum HOM05D001309 ORTHO05D000385 6.5e-06 56.2 217 24.9


User provided reference genes

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