Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen05g025870 Solanum pennellii HOM05D007219 ORTHO05D008995 7.2e-107 390.6 196 100.0
CAN.G716.12 Capsicum annuum HOM05D007219 ORTHO05D008995 8.0e-98 360.5 196 91.8
Nitab4.5_0011106g0020 Nicotiana tabacum HOM05D007219 ORTHO05D008995 2.0e-93 345.9 196 87.8
Peaxi162Scf00147g01822 Petunia axillaris HOM05D007219 ORTHO05D008995 6.1e-90 334.3 196 82.7
PGSC0003DMG400020758 Solanum tuberosum HOM05D007219 ORTHO05D008995 3.1e-86 322.0 171 94.2
Cc07_g19250 Coffea canephora HOM05D007219 ORTHO05D008995 2.3e-84 315.8 194 77.8
TAR626G0546 Trochodendron aralioides HOM05D007219 ORTHO05D008995 2.8e-82 308.9 196 76.0
CSS0025035 Camellia sinensis var. sinensis HOM05D007219 ORTHO05D008995 8.0e-82 307.4 196 77.6
Oeu029809.1 Olea europaea HOM05D007219 ORTHO05D008995 1.8e-81 306.2 195 75.4
Migut.M00020 Erythranthe guttata HOM05D007219 ORTHO05D008995 2.3e-81 305.8 196 75.5
Hma1.2p1_0133F.1_g061230 Hydrangea macrophylla HOM05D007219 ORTHO05D008995 3.0e-81 305.4 194 75.3
Prupe.3G202800 Prunus persica HOM05D007219 ORTHO05D008995 3.0e-81 305.4 195 75.4
vmacro12114 Vaccinium macrocarpon HOM05D007219 ORTHO05D008995 2.0e-80 302.8 196 75.0
Nn1g03266 Nelumbo nucifera HOM05D007219 ORTHO05D008995 2.6e-80 302.4 188 76.6
Duzib138G0301 Durio zibethinus HOM05D007219 ORTHO05D008995 3.4e-80 302.0 196 74.0
Gohir.A07G167500 Gossypium hirsutum HOM05D007219 ORTHO05D008995 3.4e-80 302.0 196 74.5
GSVIVG01030037001 Vitis vinifera HOM05D007219 ORTHO05D008995 1.3e-79 300.1 194 74.2
Dinv05845 Davidia involucrata HOM05D007219 ORTHO05D008995 6.4e-79 297.7 190 74.2
SalBow7G0564 Salvia bowleyana HOM05D007219 ORTHO05D008995 1.9e-78 296.2 194 74.7
Gohir.D07G173000 Gossypium hirsutum HOM05D007219 ORTHO05D008995 2.4e-78 295.8 196 73.5
Gorai.001G193200 Gossypium raimondii HOM05D007219 ORTHO05D008995 2.4e-78 295.8 196 73.5
MSTRG.14930 Avicennia marina HOM05D007219 ORTHO05D008995 5.4e-78 294.7 196 74.0
Lsat_1_v5_gn_5_121560 Lactuca sativa HOM05D007219 ORTHO05D008995 1.6e-77 293.1 196 71.9
MD09G1120700 Malus domestica HOM05D007219 ORTHO05D008995 3.5e-77 292.0 195 73.3
QL08p028873 Quercus lobata HOM05D007219 ORTHO05D008995 1.0e-76 290.4 194 71.6
Thecc.01G189100 Theobroma cacao HOM05D007219 ORTHO05D008995 1.0e-76 290.4 196 71.4
Atru.chr6.3346 Acer truncatum HOM05D007219 ORTHO05D008995 1.3e-76 290.0 196 73.0
FAN14G1895 Fragaria x ananassa HOM05D007219 ORTHO05D008995 1.3e-76 290.0 194 74.7
FvH4_6g41300 Fragaria vesca HOM05D007219 ORTHO05D008995 1.7e-76 289.7 194 74.7
ECA234G4660 Erigeron canadensis HOM05D007219 ORTHO05D008995 2.3e-76 289.3 196 72.4
CsaV3_7G002720 Cucumis sativus L. HOM05D007219 ORTHO05D008995 3.0e-76 288.9 194 73.7
RcHm_v2.0_Chr2g0156861 Rosa chinensis HOM05D007219 ORTHO05D008995 3.9e-76 288.5 193 74.1
CANSAT64G0298 Cannabis sativa HOM05D007219 ORTHO05D008995 7.3e-75 284.3 196 70.4
Potri.014G161800 Populus trichocarpa HOM05D007219 ORTHO05D008995 1.2e-74 283.5 192 71.4
THA.LOC104826618 Tarenaya hassleriana HOM05D007219 ORTHO05D008995 1.6e-74 283.1 195 68.2
Cpa.g.sc395.3 Carica papaya HOM05D007219 ORTHO05D008995 2.1e-74 282.7 196 69.9
HanXRQChr12g0373931 Helianthus annuus HOM05D007219 ORTHO05D008995 3.6e-74 282.0 189 72.5
Lj6g0005071 Lotus japonicus HOM05D007219 ORTHO05D008995 6.2e-74 281.2 194 70.6
Eucgr.K00659 Eucalyptus grandis HOM05D007219 ORTHO05D008995 1.8e-73 279.6 190 71.1
Sp3g23430 Schrenkiella parvula HOM05D007219 ORTHO05D008995 1.8e-73 279.6 195 68.7
Glyma.13G025700 Glycine max HOM05D007219 ORTHO05D008995 2.3e-73 279.3 194 71.6
TWI36G0002 Tripterygium wilfordii HOM05D007219 ORTHO05D008995 5.2e-73 278.1 196 68.4
Hund24148 Selenicereus undatus HOM05D007219 ORTHO05D008995 8.9e-73 277.3 188 71.8
PGR142G0267 Punica granatum HOM05D007219 ORTHO05D008995 1.2e-72 276.9 200 69.0
Aqoxy1G04023 Aquilegia oxysepala HOM05D007219 ORTHO05D008995 1.5e-72 276.6 195 69.2
AT2G04845 Arabidopsis thaliana HOM05D007219 ORTHO05D008995 7.5e-72 274.2 194 67.5
AL3G42440 Arabidopsis lyrata HOM05D007219 ORTHO05D008995 9.8e-72 273.9 195 67.7
Carub.0003s2645 Capsella rubella HOM05D007219 ORTHO05D008995 9.8e-72 273.9 195 67.7
Manes.12G083700 Manihot esculenta HOM05D007219 ORTHO05D008995 9.8e-72 273.9 181 73.5
Aa31LG1G4150 Aethionema arabicum HOM05D002708 ORTHO05D003516 1.7e-71 273.1 195 67.7
DCAR_019229 Daucus carota HOM05D007219 ORTHO05D008995 2.2e-71 272.7 190 71.6
Thhalv10002661m.g Eutrema salsugineum HOM05D007219 ORTHO05D008995 2.2e-71 272.7 195 68.2
PSO302G0207 Papaver somniferum HOM05D007219 ORTHO05D008995 2.9e-71 272.3 180 73.3
arahy.Tifrunner.gnm1.ann1.N6EW4G Arachis hypogaea HOM05D007219 ORTHO05D008995 1.1e-70 270.4 194 69.6
CARHR102840 Cardamine hirsuta HOM05D007219 ORTHO05D008995 1.4e-70 270.0 194 67.5
Medtr3g083200 Medicago truncatula HOM05D007219 ORTHO05D008995 1.4e-70 270.0 194 68.6
Phvul.006G013300 Phaseolus vulgaris HOM05D007219 ORTHO05D008995 1.9e-70 269.6 194 68.0
BolC3t17801H Brassica oleracea HOM05D007219 ORTHO05D008995 3.2e-70 268.9 195 65.1
Psat5g102680 Pisum sativum HOM05D007219 ORTHO05D008995 9.2e-70 267.3 194 67.0
Lalb_Chr22g0360881 Lupinus albus HOM05D007219 ORTHO05D008995 1.2e-69 266.9 195 66.2
TPR.G19322 Trifolium pratense HOM05D007219 ORTHO05D008995 2.1e-69 266.2 194 68.0
Sed0018447 Sechium edule HOM05D007219 ORTHO05D008995 7.8e-69 264.2 169 76.9
CiPaw.03G278000 Carya illinoinensis HOM05D007219 ORTHO05D008995 1.3e-68 263.5 194 67.5
CDE10G1006 Ceratophyllum demersum HOM05D007219 ORTHO05D008995 5.0e-68 261.5 196 66.8
MELO3C024213.2 Cucumis melo HOM05D007219 ORTHO05D008995 1.9e-67 259.6 194 68.0
Haze_12702 Corylus avellana HOM05D007219 ORTHO05D008995 3.3e-67 258.8 187 69.0
Actinidia07878 Actinidia chinensis HOM05D007219 ORTHO05D008995 4.3e-67 258.5 170 74.7
ATR0712G058 Amborella trichopoda HOM05D007219 ORTHO05D008995 9.5e-67 257.3 195 63.6
AUR62017530 Chenopodium quinoa HOM05D007219 ORTHO05D008995 9.5e-67 257.3 257 54.1
HPP92_020392 Vanilla planifolia HOM05D007219 ORTHO05D008995 1.6e-66 256.5 179 69.8
Duzib133G0547 Durio zibethinus HOM05D007219 ORTHO05D008995 3.6e-66 255.4 187 69.0
COL.COLO4_04268 Corchorus olitorius HOM05D007219 ORTHO05D008995 6.8e-65 251.1 150 79.3
Sabra14G0123400 Salix brachista HOM05D007219 ORTHO05D008995 2.6e-64 249.2 268 52.6
Ciclev10016673m.g Citrus clementina HOM05D007219 ORTHO05D008995 2.2e-63 246.1 154 76.0
Os03g0194400 Oryza sativa ssp. japonica HOM05D007219 ORTHO05D008995 4.6e-61 238.4 176 65.3
Dinv07849 Davidia involucrata HOM05D007219 ORTHO05D008995 6.6e-60 234.6 143 76.9
FAN05G4854 Fragaria x ananassa HOM05D007219 ORTHO05D008995 8.6e-60 234.2 200 63.5
EL10Ac9g22747 Beta vulgaris HOM05D007219 ORTHO05D008995 1.1e-59 233.8 196 61.7
MBI16_g42309_MAGBIO Magnolia biondii HOM05D007219 ORTHO05D008995 1.5e-59 233.4 151 76.8
SGA_v2.0_scaffold73G24522 Striga asiatica HOM05D007219 ORTHO05D008995 1.5e-59 233.4 170 70.6
arahy.Tifrunner.gnm1.ann1.E78GDQ Arachis hypogaea HOM05D007219 ORTHO05D008995 5.8e-56 221.5 320 42.5
arahy.Tifrunner.gnm1.ann1.XZ9N91 Arachis hypogaea HOM05D007219 ORTHO05D008995 5.8e-56 221.5 320 42.5
Zm00001eb401150 Zea mays HOM05D007219 ORTHO05D008995 2.2e-55 219.5 152 67.8
QL08p028923 Quercus lobata HOM05D007219 ORTHO05D008995 8.4e-55 217.6 343 39.4
SMO115G0308 Selaginella moellendorffii HOM05D007219 ORTHO05D008995 1.4e-49 200.3 171 57.9
FAN02G0754 Fragaria x ananassa HOM05D007219 ORTHO05D008995 1.3e-47 193.7 194 54.1
Ah.14g082820 Amaranthus hybridus HOM05D007219 ORTHO05D008995 3.8e-47 192.2 136 68.4
Mapoly0089s0028 Marchantia polymorpha HOM05D007219 ORTHO05D008995 8.4e-47 191.0 172 53.5
Sc21g0000880 Simmondsia chinensis HOM05D007219 ORTHO05D008995 1.1e-46 190.7 110 80.0
ClCG02G002620 Citrullus lanatus HOM05D007219 ORTHO05D008995 3.2e-46 189.1 136 69.9
AUR62015074 Chenopodium quinoa HOM05D007219 ORTHO05D008995 3.5e-45 185.7 137 66.4
Cfa014252 Carpinus fangiana HOM05D007219 ORTHO05D008995 1.3e-42 177.2 133 65.4
VMungo0540G0477 Vigna mungo HOM05D007219 ORTHO05D008995 1.4e-41 173.7 191 51.8
Ca_16365_v3 Cicer arietinum L. HOM05D007219 ORTHO05D008995 1.5e-40 170.2 121 69.4
Rhsim06G0172900 Rhododendron simsii HOM05D007219 ORTHO05D008995 6.7e-36 154.8 235 45.5
Nitab4.5_0002877g0050 Nicotiana tabacum HOM05D007219 ORTHO05D008995 1.5e-35 153.7 97 82.5
MCO15G116 Micromonas commoda HOM05D007219 ORTHO05D008995 3.3e-35 152.5 171 48.5
CBR_g31837 Chara braunii HOM05D007219 ORTHO05D008995 4.9e-31 138.7 280 32.5
SEGI_01956 Sequoiadendron giganteum HOM05D007219 ORTHO05D008995 1.6e-29 133.7 82 73.2
CSS0035148 Camellia sinensis var. sinensis HOM05D007219 ORTHO05D008995 4.9e-23 112.1 96 62.5
MD17G1111700 Malus domestica HOM05D007219 ORTHO05D008995 5.1e-20 102.1 109 51.4
Thhalv10003074m.g Eutrema salsugineum HOM05D007219 ORTHO05D008995 6.9e-17 91.7 112 45.5
AagrBONN_evm.TU.Sc2ySwM_362.1409 Anthoceros agrestis HOM05D007219 ORTHO05D008995 4.5e-16 89.0 129 40.3
Actinidia09773 Actinidia chinensis HOM05D007219 ORTHO05D008995 5.0e-15 85.5 55 74.5
MD17G1111600 Malus domestica HOM05D007219 ORTHO05D008995 2.1e-13 80.1 72 55.6
PRCOL_00004041 Prasinoderma coloniale HOM05D007219 ORTHO05D008995 6.1e-13 78.6 164 34.1
CSS0030489 Camellia sinensis var. sinensis HOM05D007219 ORTHO05D008995 2.4e-09 66.6 41 68.3
Oeu027288.1 Olea europaea HOM05D007219 ORTHO05D008995 4.1e-09 65.9 49 65.3
CSS0021882 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.2e-08 64.3 34 82.4
Cre03.g184151 Chlamydomonas reinhardtii HOM05D007219 ORTHO05D008995 1.5e-08 63.9 95 40.0


User provided reference genes

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