Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen05g025420 Solanum pennellii HOM05D007186 ORTHO05D008970 1.4e-96 356.3 178 100.0
Solyc05g041430.3 Solanum lycopersicum HOM05D007186 ORTHO05D008970 4.0e-96 354.8 178 99.4
PGSC0003DMG400030273 Solanum tuberosum HOM05D007186 ORTHO05D008970 1.6e-84 316.2 181 89.0
Nitab4.5_0011275g0030 Nicotiana tabacum HOM05D007186 ORTHO05D008970 4.6e-68 261.5 164 80.5
Nitab4.5_0002877g0030 Nicotiana tabacum HOM05D007186 ORTHO05D008970 1.3e-67 260.0 154 80.5
Peaxi162Scf00147g01818 Petunia axillaris HOM05D007186 ORTHO05D008970 8.1e-65 250.8 166 74.7
Rhsim06G0171800 Rhododendron simsii HOM05D007186 ORTHO05D008970 7.1e-61 237.7 151 74.8
Dinv07835 Davidia involucrata HOM05D007186 ORTHO05D008970 1.9e-58 229.6 166 68.7
CSS0038956 Camellia sinensis var. sinensis HOM05D007186 ORTHO05D008970 9.0e-56 220.7 166 65.7
Gorai.001G219300 Gossypium raimondii HOM05D007186 ORTHO05D008970 2.0e-55 219.5 147 72.8
Gohir.D07G195800 Gossypium hirsutum HOM05D007186 ORTHO05D008970 5.8e-55 218.0 147 72.1
FvH4_6g41490 Fragaria vesca HOM05D007186 ORTHO05D008970 1.1e-53 213.8 147 68.7
Potri.014G162700 Populus trichocarpa HOM05D007186 ORTHO05D008970 4.2e-53 211.8 165 63.6
FAN05G2361 Fragaria x ananassa HOM05D007186 ORTHO05D008970 5.4e-53 211.5 147 68.7
TAR624G0839 Trochodendron aralioides HOM05D007186 ORTHO05D008970 1.6e-52 209.9 148 69.6
COL.COLO4_06941 Corchorus olitorius HOM05D007186 ORTHO05D008970 2.1e-52 209.5 166 63.9
FAN09G3526 Fragaria x ananassa HOM05D007186 ORTHO05D008970 2.1e-52 209.5 147 69.4
QL08p029418 Quercus lobata HOM05D007186 ORTHO05D008970 3.5e-52 208.8 166 62.0
TWI36G0211 Tripterygium wilfordii HOM05D007186 ORTHO05D008970 3.5e-52 208.8 152 63.8
RcHm_v2.0_Chr2g0157151 Rosa chinensis HOM05D007186 ORTHO05D008970 6.0e-52 208.0 149 67.8
CiPaw.04G194300 Carya illinoinensis HOM05D007186 ORTHO05D008970 1.3e-51 206.8 149 67.8
Phvul.008G287400 Phaseolus vulgaris HOM05D007186 ORTHO05D008970 1.3e-51 206.8 146 69.2
GSVIVG01030422001 Vitis vinifera HOM05D007186 ORTHO05D008970 2.3e-51 206.1 152 67.1
Sabra14G0124100 Salix brachista HOM05D007186 ORTHO05D008970 6.7e-51 204.5 165 61.8
CANSAT54G2500 Cannabis sativa HOM05D007186 ORTHO05D008970 1.9e-50 203.0 166 62.0
Ciclev10016992m.g Citrus clementina HOM05D007186 ORTHO05D008970 1.9e-50 203.0 147 68.0
Prupe.3G204800 Prunus persica HOM05D007186 ORTHO05D008970 3.3e-50 202.2 149 65.1
VMungo0647G1315 Vigna mungo HOM05D007186 ORTHO05D008970 3.3e-50 202.2 146 69.2
AUR62015089 Chenopodium quinoa HOM05D007186 ORTHO05D008970 5.6e-50 201.4 159 61.0
AUR62044229 Chenopodium quinoa HOM05D007186 ORTHO05D008970 5.6e-50 201.4 159 61.0
AUR62044345 Chenopodium quinoa HOM05D007186 ORTHO05D008970 5.6e-50 201.4 159 61.0
TPR.G15068 Trifolium pratense HOM05D007186 ORTHO05D008970 7.4e-50 201.1 146 66.4
CsaV3_6G009340 Cucumis sativus L. HOM05D007186 ORTHO05D008970 9.6e-50 200.7 151 65.6
PGR142G1014 Punica granatum HOM05D007186 ORTHO05D008970 1.3e-49 200.3 168 59.5
Atru.chr6.3329 Acer truncatum HOM05D007186 ORTHO05D008970 1.6e-49 199.9 169 59.8
Glyma.02G307400 Glycine max HOM05D007186 ORTHO05D008970 1.6e-49 199.9 148 68.2
Hma1.2p1_0133F.1_g061060 Hydrangea macrophylla HOM05D007186 ORTHO05D008970 2.8e-49 199.1 132 71.2
PSO675G5362 Papaver somniferum HOM05D007186 ORTHO05D008970 4.8e-49 198.4 158 61.4
AUR62017547 Chenopodium quinoa HOM05D007186 ORTHO05D008970 6.2e-49 198.0 159 60.4
Eucgr.K00670 Eucalyptus grandis HOM05D007186 ORTHO05D008970 6.2e-49 198.0 154 64.3
Medtr5g097970 Medicago truncatula HOM05D007186 ORTHO05D008970 6.2e-49 198.0 152 63.8
unitig_578.g16640 Utricularia gibba HOM05D007186 ORTHO05D008970 6.2e-49 198.0 168 57.7
MD09G1119400 Malus domestica HOM05D007186 ORTHO05D008970 1.8e-48 196.4 148 64.9
Actinidia07891 Actinidia chinensis HOM05D007186 ORTHO05D008970 3.1e-48 195.7 159 61.6
MELO3C019365.2 Cucumis melo HOM05D007186 ORTHO05D008970 3.1e-48 195.7 151 63.6
Psat2g003840 Pisum sativum HOM05D007186 ORTHO05D008970 2.6e-47 192.6 148 64.2
Duzib138G0377 Durio zibethinus HOM05D007186 ORTHO05D008970 7.6e-47 191.0 146 65.8
THA.LOC104808856 Tarenaya hassleriana HOM05D007186 ORTHO05D008970 7.6e-47 191.0 148 60.8
Aqoxy1G02832 Aquilegia oxysepala HOM05D007186 ORTHO05D008970 1.3e-46 190.3 150 58.0
Lsat_1_v5_gn_9_105540 Lactuca sativa HOM05D007186 ORTHO05D008970 8.4e-46 187.6 149 63.1
ECA240G1183 Erigeron canadensis HOM05D007186 ORTHO05D008970 1.4e-45 186.8 147 61.2
Hund24136 Selenicereus undatus HOM05D007186 ORTHO05D008970 1.4e-45 186.8 147 59.2
arahy.Tifrunner.gnm1.ann1.HI5B62 Arachis hypogaea HOM05D007186 ORTHO05D008970 7.1e-45 184.5 150 61.3
LjContig00081g0025535 Lotus japonicus HOM05D000229 ORTHO05D008970 7.1e-45 184.5 138 65.9
HanXRQChr03g0075731 Helianthus annuus HOM05D007186 ORTHO05D008970 9.3e-45 184.1 150 61.3
HPP92_022801 Vanilla planifolia HOM05D007186 ORTHO05D008970 1.2e-44 183.7 145 60.7
C03p55060 Brassica napus HOM05D007186 ORTHO05D008970 2.1e-44 183.0 165 53.3
BolC3t17781H Brassica oleracea HOM05D007186 ORTHO05D008970 2.1e-44 183.0 165 53.3
Haze_12721 Corylus avellana HOM05D007186 ORTHO05D008970 2.1e-44 183.0 235 45.5
BcaC01g03189 Brassica carinata HOM05D007186 ORTHO05D008970 7.9e-44 181.0 165 53.3
Lalb_Chr04g0247191 Lupinus albus HOM05D007186 ORTHO05D008970 7.9e-44 181.0 145 60.7
AL3G42380 Arabidopsis lyrata HOM05D007186 ORTHO05D008970 1.8e-43 179.9 147 57.1
Migut.M00010 Erythranthe guttata HOM05D007186 ORTHO05D008970 3.9e-43 178.7 152 61.8
Carub.0003s2639 Capsella rubella HOM05D007186 ORTHO05D008970 6.7e-43 177.9 148 56.1
MBI19_g06151_MAGBIO Magnolia biondii HOM05D007186 ORTHO05D008970 1.1e-42 177.2 132 64.4
arahy.Tifrunner.gnm1.ann1.CRYT1U Arachis hypogaea HOM05D007186 ORTHO05D008970 1.9e-42 176.4 162 56.8
ClCG02G009490 Citrullus lanatus HOM05D007186 ORTHO05D008970 3.3e-42 175.6 203 47.8
Oeu040479.1 Olea europaea HOM05D007186 ORTHO05D008970 7.4e-42 174.5 116 72.4
Thhalv10002690m.g Eutrema salsugineum HOM05D007186 ORTHO05D008970 1.6e-41 173.3 149 54.4
Sed0024069 Sechium edule HOM05D007186 ORTHO05D008970 1.6e-41 173.3 140 60.7
Sp3g23400 Schrenkiella parvula HOM05D007186 ORTHO05D008970 3.7e-41 172.2 148 53.4
CARHR102760 Cardamine hirsuta HOM05D007186 ORTHO05D008970 1.1e-40 170.6 147 55.1
ATR0712G003 Amborella trichopoda HOM05D007186 ORTHO05D008970 5.3e-40 168.3 140 56.4
BraA03t13576Z Brassica rapa HOM05D007186 ORTHO05D008970 9.0e-40 167.5 149 53.7
A03p44430 Brassica napus HOM05D007186 ORTHO05D008970 2.0e-39 166.4 149 53.7
Manes.13G063846 Manihot esculenta HOM05D007186 ORTHO05D008970 4.5e-39 165.2 131 62.6
AUR62044292 Chenopodium quinoa HOM05D007186 ORTHO05D008970 5.8e-39 164.9 154 53.9
Glyma.14G005600 Glycine max HOM05D007186 ORTHO05D008970 2.9e-38 162.5 131 63.4
C03p55120 Brassica napus HOM05D007186 ORTHO05D008970 3.8e-38 162.2 149 51.0
BcaC01g03185 Brassica carinata HOM05D007186 ORTHO05D008970 4.9e-38 161.8 149 51.7
Lj8A132T57 Lonicera japonica HOM05D007186 ORTHO05D008970 8.4e-38 161.0 167 54.5
BolC3t17784H Brassica oleracea HOM05D007186 ORTHO05D008970 1.4e-37 160.2 149 51.0
BcaB08g34487 Brassica carinata HOM05D007186 ORTHO05D008970 2.5e-37 159.5 137 54.0
SalBow7G1582 Salvia bowleyana HOM05D000037 ORTHO05D000150 2.1e-36 156.4 130 62.3
Zm00001eb245650 Zea mays HOM05D007186 ORTHO05D008970 2.7e-36 156.0 126 58.7
BcaC01g03187 Brassica carinata HOM05D007186 ORTHO05D008970 8.7e-35 151.0 128 54.7
Aa31sc53G20 Aethionema arabicum HOM05D007186 ORTHO05D006113 4.3e-34 148.7 147 49.7
Os02g0588600 Oryza sativa ssp. japonica HOM05D007186 ORTHO05D008970 4.1e-32 142.1 152 49.3
DCAR_032166 Daucus carota HOM05D000693 ORTHO05D008970 1.0e-30 137.5 99 64.6
SEGI_21441 Sequoiadendron giganteum HOM05D007186 ORTHO05D008970 5.0e-30 135.2 147 44.2
vmacro12130 Vaccinium macrocarpon HOM05D007186 ORTHO05D008970 7.2e-29 131.3 162 48.8
Sopen05g025410 Solanum pennellii HOM05D007186 ORTHO05D008970 6.7e-27 124.8 67 95.5
Gohir.A07G189700 Gossypium hirsutum HOM05D007186 ORTHO05D008970 2.5e-26 122.9 77 79.2
MSTRG.6661 Avicennia marina HOM05D007186 ORTHO05D008970 1.3e-25 120.6 90 72.2
FAN14G0401 Fragaria x ananassa HOM05D007186 ORTHO05D008970 1.3e-25 120.6 108 60.2
Thecc.01G185600 Theobroma cacao HOM05D007186 ORTHO05D008970 2.2e-25 119.8 104 65.4
Pp3c15_5880 Physcomitrium patens HOM05D007186 ORTHO05D008970 2.8e-25 119.4 162 37.7
EL10Ac9g22768 Beta vulgaris HOM05D007186 ORTHO05D008970 8.2e-25 117.9 109 59.6
FAN02G3692 Fragaria x ananassa HOM05D007186 ORTHO05D008970 1.3e-22 110.5 80 71.2
Sc20g0003870 Simmondsia chinensis HOM05D007186 ORTHO05D008970 1.7e-22 110.2 83 55.4
Nn1g07413 Nelumbo nucifera HOM05D007186 ORTHO05D008970 4.2e-21 105.5 73 61.6
arahy.Tifrunner.gnm1.ann1.I316DY Arachis hypogaea HOM05D007186 ORTHO05D008970 7.2e-21 104.8 88 54.5
Eucgr.K00669 Eucalyptus grandis HOM05D007186 ORTHO05D008970 7.9e-20 101.3 73 60.3
Mapoly0123s0026 Marchantia polymorpha HOM05D007186 ORTHO05D008970 5.1e-19 98.6 144 34.7
SMO364G0535 Selaginella moellendorffii HOM05D007186 ORTHO05D008970 2.6e-18 96.3 140 37.1
arahy.Tifrunner.gnm1.ann1.ZIY68Y Arachis hypogaea HOM05D007186 ORTHO05D008970 4.4e-18 95.5 86 52.3
AUR62025215 Chenopodium quinoa HOM05D007186 ORTHO05D008970 2.2e-17 93.2 66 71.2
arahy.Tifrunner.gnm1.ann1.5R4F72 Arachis hypogaea HOM05D007186 ORTHO05D008970 6.1e-12 75.1 116 39.7
MCO11G099 Micromonas commoda HOM05D007186 ORTHO05D008970 3.3e-10 69.3 168 31.0
AT2G04790 Arabidopsis thaliana HOM05D007186 ORTHO05D008970 3.7e-09 65.9 52 61.5
Thhalv10002943m.g Eutrema salsugineum HOM05D007186 ORTHO05D008970 1.6e-07 60.5 73 41.1


User provided reference genes

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