Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen05g024280 Solanum pennellii HOM05D008571 ORTHO05D011280 3.3e-133 478.4 244 100.0
Sopen12g010550 Solanum pennellii HOM05D008571 ORTHO05D011280 5.5e-88 328.2 242 72.7
PGSC0003DMG400024370 Solanum tuberosum HOM05D008571 ORTHO05D011280 1.2e-82 310.5 241 70.5
PGSC0003DMG400040582 Solanum tuberosum HOM05D008571 ORTHO05D011280 1.7e-76 290.0 233 67.8
Sopen02g010540 Solanum pennellii HOM05D008571 ORTHO05D011280 2.0e-69 266.5 152 88.8
Sopen08g023430 Solanum pennellii HOM05D008571 ORTHO05D011280 1.7e-65 253.4 200 70.0
PGSC0003DMG400021964 Solanum tuberosum HOM05D008571 ORTHO05D011280 2.6e-61 239.6 160 79.4
Sopen09g011970 Solanum pennellii HOM05D008571 ORTHO05D011280 1.8e-51 206.8 163 68.7
Sopen11g011280 Solanum pennellii HOM05D008571 ORTHO05D011280 1.1e-40 171.0 125 69.6
Sopen01g024850 Solanum pennellii HOM05D008571 ORTHO05D011280 4.7e-39 165.6 167 55.1
Sopen10g024020 Solanum pennellii HOM05D008571 ORTHO05D011280 1.0e-38 164.5 134 64.9
Sopen10g024150 Solanum pennellii HOM05D008571 ORTHO05D011280 3.8e-33 146.0 121 63.6
Sopen03g016140 Solanum pennellii HOM05D008571 ORTHO05D011280 6.6e-33 145.2 118 62.7
Sopen10g024090 Solanum pennellii HOM05D008571 ORTHO05D011280 7.3e-32 141.7 121 62.0
Sopen05g011290 Solanum pennellii HOM05D008571 ORTHO05D011280 1.2e-31 141.0 121 60.3
PGSC0003DMG400017449 Solanum tuberosum HOM05D008571 ORTHO05D011280 3.1e-30 136.3 123 65.9
PGSC0003DMG400017450 Solanum tuberosum HOM05D008571 ORTHO05D011280 3.1e-30 136.3 123 65.9
PGSC0003DMG400038206 Solanum tuberosum HOM05D008571 ORTHO05D011280 2.6e-29 133.3 237 42.2
Cc04_g10140 Coffea canephora HOM05D000002 ORTHO05D004433 3.7e-28 129.4 145 49.0
Sopen08g023440 Solanum pennellii HOM05D003027 ORTHO05D011280 1.1e-27 127.9 96 79.2
Sopen12g020480 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-27 127.1 86 74.4
Sopen02g010940 Solanum pennellii HOM05D008571 ORTHO05D011280 3.2e-27 126.3 94 70.2
TAR009G0003 Trochodendron aralioides HOM05D008571 ORTHO05D004433 5.4e-27 125.6 213 39.0
Sopen06g004470 Solanum pennellii HOM05D008571 ORTHO05D011280 7.0e-27 125.2 110 57.3
Sopen05g008270 Solanum pennellii HOM05D000006 ORTHO05D000695 1.0e-25 121.3 80 82.5
BolC8t49584H Brassica oleracea HOM05D000002 ORTHO05D004433 1.7e-25 120.6 142 49.3
RcHm_v2.0_Chr3g0481931 Rosa chinensis HOM05D000002 ORTHO05D000001 3.0e-25 119.8 172 40.7
PGSC0003DMG400040136 Solanum tuberosum HOM05D008571 ORTHO05D011280 3.0e-25 119.8 104 63.5
PGSC0003DMG400005599 Solanum tuberosum HOM05D008571 ORTHO05D000574 3.3e-24 116.3 83 66.3
FvH4_5g31431 Fragaria vesca HOM05D000002 ORTHO05D004433 6.2e-23 112.1 169 40.8
Sopen00g014100 Solanum pennellii HOM05D008571 ORTHO05D011280 6.2e-23 112.1 111 56.8
PGSC0003DMG400046033 Solanum tuberosum HOM05D008571 ORTHO05D011280 2.3e-22 110.2 120 50.8
Oeu006707.1 Olea europaea HOM05D000002 ORTHO05D004433 1.7e-20 104.0 175 41.1
Sopen07g005460 Solanum pennellii HOM05D008571 ORTHO05D011280 1.7e-20 104.0 102 55.9
ECA233G2071 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.4e-20 102.1 175 40.6
Nn1g02545 Nelumbo nucifera HOM05D000002 ORTHO05D004433 7.0e-19 98.6 140 42.1
Sopen07g005370 Solanum pennellii HOM05D008571 ORTHO05D000001 1.2e-18 97.8 102 52.0
Sopen07g005410 Solanum pennellii HOM05D008571 ORTHO05D011280 2.1e-18 97.1 101 52.5
Sopen00g013760 Solanum pennellii HOM05D008571 ORTHO05D011280 3.5e-18 96.3 95 52.6
PGSC0003DMG401023109 Solanum tuberosum HOM05D008571 ORTHO05D011280 4.6e-18 95.9 94 55.3
ECA233G1874 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.8e-18 95.1 154 39.6
ECA238G3349 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.8e-18 95.1 210 34.3
SHI16256 Sapria himalayana HOM05D000002 ORTHO05D004433 1.0e-17 94.7 174 36.2
SHI27796 Sapria himalayana HOM05D000002 ORTHO05D000001 1.3e-17 94.4 174 36.2
ECA234G1536 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.7e-17 94.0 154 39.6
SHI03937 Sapria himalayana HOM05D000002 ORTHO05D004433 2.3e-17 93.6 177 36.2
SHI06746 Sapria himalayana HOM05D000002 ORTHO05D004433 2.3e-17 93.6 174 36.2
SHI47859 Sapria himalayana HOM05D000002 ORTHO05D004433 2.3e-17 93.6 174 36.2
ECA238G4301 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.1e-17 92.4 167 37.7
SHI07649 Sapria himalayana HOM05D000002 ORTHO05D004433 5.1e-17 92.4 174 36.2
SHI10488 Sapria himalayana HOM05D000002 ORTHO05D000001 5.1e-17 92.4 174 35.6
SHI18424 Sapria himalayana HOM05D000002 ORTHO05D004433 5.1e-17 92.4 174 35.6
SHI32918 Sapria himalayana HOM05D000002 ORTHO05D000001 6.6e-17 92.0 174 35.6
SHI14609 Sapria himalayana HOM05D000002 ORTHO05D000001 8.6e-17 91.7 174 35.6
SHI18328 Sapria himalayana HOM05D000002 ORTHO05D000001 8.6e-17 91.7 174 36.2
SHI18394 Sapria himalayana HOM05D000002 ORTHO05D004433 8.6e-17 91.7 152 39.5
SHI49936 Sapria himalayana HOM05D000002 ORTHO05D000001 1.1e-16 91.3 175 35.4
PGSC0003DMG400023224 Solanum tuberosum HOM05D008571 ORTHO05D011280 1.1e-16 91.3 94 53.2
ECA234G3041 Erigeron canadensis HOM05D001549 ORTHO05D003098 1.9e-16 90.5 187 35.8
Oeu026048.1 Olea europaea HOM05D000002 ORTHO05D000001 1.9e-16 90.5 170 37.6
SHI02070 Sapria himalayana HOM05D000002 ORTHO05D000001 3.3e-16 89.7 174 36.8
Nn4g23986 Nelumbo nucifera HOM05D000002 ORTHO05D000001 9.5e-16 88.2 196 32.7
SHI10030 Sapria himalayana HOM05D000002 ORTHO05D000001 9.5e-16 88.2 174 35.1
SHI38827 Sapria himalayana HOM05D000002 ORTHO05D004433 9.5e-16 88.2 169 39.1
SHI39436 Sapria himalayana HOM05D000002 ORTHO05D000001 9.5e-16 88.2 168 36.3
SHI39438 Sapria himalayana HOM05D000002 ORTHO05D000001 9.5e-16 88.2 168 36.3
SHI45609 Sapria himalayana HOM05D000002 ORTHO05D000001 1.2e-15 87.8 174 35.1
PGSC0003DMG400004307 Solanum tuberosum HOM05D008571 ORTHO05D011280 1.2e-15 87.8 94 47.9
ECA246G3093 Erigeron canadensis HOM05D001467 ORTHO05D001214 2.8e-15 86.7 155 37.4
ECA236G5067 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.6e-15 86.3 157 38.9
Nn1g07613 Nelumbo nucifera HOM05D000002 ORTHO05D000001 3.6e-15 86.3 176 34.7
CAN.G1829.1 Capsicum annuum HOM05D000583 ORTHO05D004433 4.7e-15 85.9 141 41.8
ECA247G3536 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.1e-15 85.1 187 33.2
PGSC0003DMG400044216 Solanum tuberosum HOM05D008571 ORTHO05D011280 8.1e-15 85.1 67 64.2
ECA240G0479 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.1e-14 84.7 162 39.5
Sopen05g027370 Solanum pennellii HOM05D000002 ORTHO05D004433 1.1e-14 84.7 223 30.9
SHI51732 Sapria himalayana HOM05D000002 ORTHO05D000001 1.4e-14 84.3 174 34.5
Sopen04g021490 Solanum pennellii HOM05D008571 ORTHO05D011280 1.4e-14 84.3 104 47.1
Nn1g09492 Nelumbo nucifera HOM05D000002 ORTHO05D004433 7.5e-13 78.6 114 43.0
MD01G1096700 Malus domestica HOM05D000002 ORTHO05D000001 1.7e-12 77.4 168 35.1
ECA246G0537 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.2e-12 77.0 165 34.5
SHI21269 Sapria himalayana HOM05D000002 ORTHO05D004433 2.9e-12 76.6 93 47.3
SHI45690 Sapria himalayana HOM05D000002 ORTHO05D000001 3.7e-12 76.3 165 36.4
ECA248G0669 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.9e-12 75.9 133 36.8
SHI47495 Sapria himalayana HOM05D000002 ORTHO05D000001 4.9e-12 75.9 165 36.4
Sopen04g014150 Solanum pennellii HOM05D008571 ORTHO05D011280 8.3e-12 75.1 93 47.3
SHI04823 Sapria himalayana HOM05D000002 ORTHO05D004433 1.1e-11 74.7 93 47.3
SHI04168 Sapria himalayana HOM05D000002 ORTHO05D004433 1.4e-11 74.3 84 50.0
PGSC0003DMG400040487 Solanum tuberosum HOM05D008571 ORTHO05D395235 1.4e-11 74.3 116 40.5
PGSC0003DMG400001585 Solanum tuberosum HOM05D000002 ORTHO05D004433 2.4e-11 73.6 143 32.2
ECA232G4651 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.2e-11 73.2 163 36.8
ECA240G4274 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.1e-11 72.8 134 38.8
Ah.13g077590 Amaranthus hybridus HOM05D000002 ORTHO05D000001 9.2e-11 71.6 160 34.4
SHI03641 Sapria himalayana HOM05D000002 ORTHO05D004433 9.2e-11 71.6 140 37.1
SHI43061 Sapria himalayana HOM05D000002 ORTHO05D004433 9.2e-11 71.6 93 45.2
Nn8g40511 Nelumbo nucifera HOM05D000002 ORTHO05D000001 1.2e-10 71.2 166 33.7
CAN.G587.30 Capsicum annuum HOM05D000015 ORTHO05D001173 1.6e-10 70.9 56 66.1
Sopen02g016810 Solanum pennellii HOM05D008571 ORTHO05D004433 1.6e-10 70.9 44 79.5
Sopen11g011140 Solanum pennellii HOM05D008200 ORTHO05D010849 1.6e-10 70.9 66 56.1
Oeu030662.1 Olea europaea HOM05D000002 ORTHO05D004433 2.7e-10 70.1 142 33.8
ECA240G1708 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.5e-10 69.7 178 30.9
CSS0036927 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004433 6.0e-10 68.9 153 35.3
ECA233G2319 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.8e-10 68.6 51 64.7
SHI18909 Sapria himalayana HOM05D000002 ORTHO05D004433 7.8e-10 68.6 63 55.6
Sopen09g013990 Solanum pennellii HOM05D008648 ORTHO05D010855 7.8e-10 68.6 41 87.8
CSS0020823 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.0e-09 68.2 87 43.7
ECA234G3440 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.3e-09 67.8 93 44.1
Nn3g20325 Nelumbo nucifera HOM05D008571 ORTHO05D004433 1.3e-09 67.8 113 39.8
ECA248G0687 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.9e-09 66.2 145 34.5
ECA233G2777 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.1e-09 65.9 95 45.3
Nn8g40101 Nelumbo nucifera HOM05D000002 ORTHO05D004433 5.1e-09 65.9 142 33.8
Ah.16g106890 Amaranthus hybridus HOM05D000002 ORTHO05D004433 8.6e-09 65.1 75 49.3
Sp1g30660 Schrenkiella parvula HOM05D008571 ORTHO05D004433 8.6e-09 65.1 113 38.1
SHI44323 Sapria himalayana HOM05D000002 ORTHO05D000001 1.1e-08 64.7 142 34.5
PGSC0003DMG400013955 Solanum tuberosum HOM05D000021 ORTHO05D000010 1.1e-08 64.7 61 57.4
ECA246G5102 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.9e-08 63.9 54 53.7
ECA248G3794 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.9e-08 63.9 108 42.6
Ah.01g008310 Amaranthus hybridus HOM05D000002 ORTHO05D004433 2.5e-08 63.5 94 43.6
PGSC0003DMG400045298 Solanum tuberosum HOM05D008571 ORTHO05D011280 2.5e-08 63.5 62 54.8
Ah.13g069620 Amaranthus hybridus HOM05D000002 ORTHO05D004433 3.3e-08 63.2 158 35.4
PGSC0003DMG400034324 Solanum tuberosum HOM05D000002 ORTHO05D004433 9.5e-08 61.6 130 32.3
TAR610G0003 Trochodendron aralioides HOM05D000002 ORTHO05D000001 1.2e-07 61.2 160 32.5
PSO675G3339 Papaver somniferum HOM05D000002 ORTHO05D004433 1.6e-07 60.8 55 49.1
PGSC0003DMG400041297 Solanum tuberosum HOM05D008571 ORTHO05D011280 2.8e-07 60.1 67 47.8
ECA233G2147 Erigeron canadensis HOM05D000509 ORTHO05D004433 3.6e-07 59.7 95 40.0
ECA238G4719 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.6e-07 59.7 75 44.0
Oeu034487.1 Olea europaea HOM05D000002 ORTHO05D004433 4.7e-07 59.3 59 44.1
SHI00405 Sapria himalayana HOM05D000002 ORTHO05D000001 4.7e-07 59.3 156 30.8
SHI43075 Sapria himalayana HOM05D000002 ORTHO05D000001 4.7e-07 59.3 156 30.8
Nn2g15606 Nelumbo nucifera HOM05D000006 ORTHO05D004433 6.2e-07 58.9 57 47.4
Sopen05g014170 Solanum pennellii HOM05D000004 ORTHO05D000002 6.2e-07 58.9 37 75.7
Sopen00g003280 Solanum pennellii HOM05D008571 ORTHO05D011280 1.4e-06 57.8 68 50.0
CSS0021348 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004433 2.4e-06 57.0 165 30.9
Nn8g39416 Nelumbo nucifera HOM05D000002 ORTHO05D000001 6.8e-06 55.5 104 34.6
Oeu010596.1 Olea europaea HOM05D000002 ORTHO05D004433 6.8e-06 55.5 105 34.3
Ah.16g108610 Amaranthus hybridus HOM05D000002 ORTHO05D004433 8.9e-06 55.1 45 57.8


User provided reference genes

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