Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen05g023240 Solanum pennellii HOM05D005251 ORTHO05D006680 1.5e-98 362.8 187 100.0
Sopen12g003800 Solanum pennellii HOM05D005251 ORTHO05D006680 8.3e-44 181.0 93 94.6
Solyc12g008870.1 Solanum lycopersicum HOM05D005251 ORTHO05D006680 2.4e-43 179.5 93 93.5
PGSC0003DMG400000278 Solanum tuberosum HOM05D005251 ORTHO05D006680 4.5e-42 175.3 93 91.4
Nitab4.5_0008523g0050 Nicotiana tabacum HOM05D005251 ORTHO05D006680 7.2e-40 167.9 93 87.1
Peaxi162Scf00498g00321 Petunia axillaris HOM05D005251 ORTHO05D006680 1.6e-39 166.8 93 87.1
CAN.G1241.24 Capsicum annuum HOM05D005251 ORTHO05D006680 1.8e-38 163.3 93 84.9
Nitab4.5_0000540g0310 Nicotiana tabacum HOM05D005251 ORTHO05D006680 3.4e-37 159.1 93 81.7
Oeu018416.2 Olea europaea HOM05D005251 ORTHO05D006680 5.9e-34 148.3 93 73.1
SGA_v2.0_scaffold21G09390 Striga asiatica HOM05D005251 ORTHO05D006680 1.7e-33 146.7 93 75.3
MSTRG.10560 Avicennia marina HOM05D005251 ORTHO05D006680 6.6e-33 144.8 93 73.1
Dinv36771 Davidia involucrata HOM05D005251 ORTHO05D006680 2.5e-32 142.9 93 69.9
Migut.L01497 Erythranthe guttata HOM05D005251 ORTHO05D006680 2.1e-31 139.8 92 70.7
Prupe.7G209200 Prunus persica HOM05D005251 ORTHO05D006680 1.8e-30 136.7 93 67.7
Duzib150G0576 Durio zibethinus HOM05D005251 ORTHO05D006680 2.3e-30 136.3 93 65.6
Ciclev10010506m.g Citrus clementina HOM05D005251 ORTHO05D006680 6.8e-30 134.8 87 70.1
Cc06_g11450 Coffea canephora HOM05D005251 ORTHO05D006680 6.8e-30 134.8 93 65.6
Gohir.D06G071400 Gossypium hirsutum HOM05D005251 ORTHO05D006680 8.9e-30 134.4 93 66.7
Gorai.010G083200 Gossypium raimondii HOM05D005251 ORTHO05D006680 8.9e-30 134.4 93 66.7
CSS0047543 Camellia sinensis var. sinensis HOM05D005251 ORTHO05D006680 1.5e-29 133.7 93 66.7
CSS0048193 Camellia sinensis var. sinensis HOM05D005251 ORTHO05D006680 1.5e-29 133.7 93 66.7
Gohir.A06G072900 Gossypium hirsutum HOM05D005251 ORTHO05D006680 1.5e-29 133.7 93 65.6
ClCG03G015560 Citrullus lanatus HOM05D005251 ORTHO05D006680 2.0e-29 133.3 90 67.8
MD15G1207600 Malus domestica HOM05D005251 ORTHO05D006680 2.6e-29 132.9 93 64.5
Rhsim05G0020500 Rhododendron simsii HOM05D005251 ORTHO05D006680 2.6e-29 132.9 93 67.7
Sed0019984 Sechium edule HOM05D005251 ORTHO05D006680 2.6e-29 132.9 90 68.9
TWI34G0442 Tripterygium wilfordii HOM05D005251 ORTHO05D006680 2.6e-29 132.9 91 69.2
MD02G1080200 Malus domestica HOM05D005251 ORTHO05D006680 4.4e-29 132.1 90 65.6
CsaV3_1G040480 Cucumis sativus L. HOM05D005251 ORTHO05D006680 5.8e-29 131.7 90 65.6
Manes.03G034200 Manihot esculenta HOM05D005251 ORTHO05D006680 5.8e-29 131.7 89 68.5
Sc18g0002110 Simmondsia chinensis HOM05D005251 ORTHO05D006680 9.8e-29 131.0 93 65.6
MELO3C015476.2 Cucumis melo HOM05D005251 ORTHO05D006680 1.7e-28 130.2 90 65.6
QL02p062545 Quercus lobata HOM05D005251 ORTHO05D006680 2.2e-28 129.8 86 67.4
GSVIVG01015197001 Vitis vinifera HOM05D005251 ORTHO05D006680 2.9e-28 129.4 93 65.6
Lsat_1_v5_gn_8_87701 Lactuca sativa HOM05D005251 ORTHO05D006680 3.7e-28 129.0 84 72.6
Lj4A303G24 Lonicera japonica HOM05D005251 ORTHO05D006680 4.9e-28 128.6 85 69.4
vmacro17241 Vaccinium macrocarpon HOM05D005251 ORTHO05D006680 4.9e-28 128.6 93 64.5
Atru.chr7.1595 Acer truncatum HOM05D005251 ORTHO05D006680 6.4e-28 128.3 93 64.5
CiPaw.03G215300 Carya illinoinensis HOM05D005251 ORTHO05D006680 6.4e-28 128.3 93 62.4
Eucgr.C00887 Eucalyptus grandis HOM05D005251 ORTHO05D006680 6.4e-28 128.3 89 70.8
Cfa003082 Carpinus fangiana HOM05D005251 ORTHO05D006680 8.3e-28 127.9 93 65.6
TAR624G0724 Trochodendron aralioides HOM05D005251 ORTHO05D006680 8.3e-28 127.9 93 63.4
Ah.09g228240 Amaranthus hybridus HOM05D005251 ORTHO05D006680 1.4e-27 127.1 93 65.6
AUR62033961 Chenopodium quinoa HOM05D005251 ORTHO05D006680 1.4e-27 127.1 93 63.4
FAN28G0072 Fragaria x ananassa HOM05D005251 ORTHO05D006680 1.9e-27 126.7 86 67.4
Actinidia39715 Actinidia chinensis HOM05D005251 ORTHO05D006680 2.4e-27 126.3 95 65.3
EL10Ac8g19209 Beta vulgaris HOM05D005251 ORTHO05D006680 2.4e-27 126.3 93 64.5
TPR.G9472 Trifolium pratense HOM05D005251 ORTHO05D006680 2.4e-27 126.3 85 70.6
CANSAT56G1459 Cannabis sativa HOM05D005251 ORTHO05D006680 4.1e-27 125.6 86 62.8
FvH4_1g07540 Fragaria vesca HOM05D005251 ORTHO05D006680 4.1e-27 125.6 86 66.3
FAN19G0073 Fragaria x ananassa HOM05D005251 ORTHO05D006680 4.1e-27 125.6 86 66.3
FAN26G1479 Fragaria x ananassa HOM05D005251 ORTHO05D006680 4.1e-27 125.6 86 66.3
Thecc.09G088600 Theobroma cacao HOM05D005251 ORTHO05D006680 4.1e-27 125.6 93 62.4
AUR62029068 Chenopodium quinoa HOM05D005251 ORTHO05D006680 5.4e-27 125.2 93 63.4
COL.COLO4_18196 Corchorus olitorius HOM05D005251 ORTHO05D006680 5.4e-27 125.2 93 60.2
HanXRQChr06g0178551 Helianthus annuus HOM05D005251 ORTHO05D006680 5.4e-27 125.2 83 72.3
unitig_8.g4690 Utricularia gibba HOM05D005251 ORTHO05D006680 7.0e-27 124.8 93 63.4
ECA232G2798 Erigeron canadensis HOM05D005251 ORTHO05D006680 9.2e-27 124.4 84 69.0
FAN23G1060 Fragaria x ananassa HOM05D005251 ORTHO05D006680 9.2e-27 124.4 97 61.9
RcHm_v2.0_Chr2g0093421 Rosa chinensis HOM05D005251 ORTHO05D006680 9.2e-27 124.4 86 64.0
FAN26G3339 Fragaria x ananassa HOM05D005251 ORTHO05D006680 1.2e-26 124.0 86 65.1
Nn8g38856 Nelumbo nucifera HOM05D005251 ORTHO05D006680 1.2e-26 124.0 86 68.6
PGR142G3350 Punica granatum HOM05D005251 ORTHO05D006680 1.2e-26 124.0 85 67.1
Psat4g015200 Pisum sativum HOM05D005251 ORTHO05D006680 1.3e-25 120.6 85 69.4
Atru.BG.14.p Acer truncatum HOM05D005251 ORTHO05D006680 1.7e-25 120.2 92 60.9
Potri.006G152100 Populus trichocarpa HOM05D005251 ORTHO05D006680 3.9e-25 119.0 93 60.2
arahy.Tifrunner.gnm1.ann1.Y01GTZ Arachis hypogaea HOM05D005251 ORTHO05D006680 1.5e-24 117.1 87 64.4
Ca_21279_v3 Cicer arietinum L. HOM05D005251 ORTHO05D006680 1.5e-24 117.1 84 66.7
Glyma.17G054700 Glycine max HOM05D005251 ORTHO05D006680 1.5e-24 117.1 93 62.4
Glyma.13G104400 Glycine max HOM05D005251 ORTHO05D006680 2.5e-24 116.3 93 62.4
Lj4g0006207 Lotus japonicus HOM05D005251 ORTHO05D006680 3.3e-24 115.9 93 61.3
CARHR270650 Cardamine hirsuta HOM05D005251 ORTHO05D006680 4.3e-24 115.5 86 62.8
Aa31LG3G12780 Aethionema arabicum HOM05D005251 ORTHO05D006680 5.6e-24 115.2 85 62.4
Phvul.003G136700 Phaseolus vulgaris HOM05D005251 ORTHO05D006680 5.6e-24 115.2 93 60.2
Lalb_Chr12g0199791 Lupinus albus HOM05D005251 ORTHO05D006680 7.3e-24 114.8 93 62.4
MBI04_g31157_MAGBIO Magnolia biondii HOM05D005251 ORTHO05D006680 9.5e-24 114.4 91 57.1
Sp6g18620 Schrenkiella parvula HOM05D005251 ORTHO05D006680 9.5e-24 114.4 86 60.5
THA.LOC104817759 Tarenaya hassleriana HOM05D005251 ORTHO05D006680 9.5e-24 114.4 90 58.9
Cpa.g.sc61.41 Carica papaya HOM05D005251 ORTHO05D006680 1.2e-23 114.0 77 68.8
Aqoxy7G04044 Aquilegia oxysepala HOM05D005251 ORTHO05D006680 1.6e-23 113.6 85 61.2
BcaC04g20043 Brassica carinata HOM05D005251 ORTHO05D006680 1.6e-23 113.6 86 60.5
C09p48540 Brassica napus HOM05D005251 ORTHO05D006680 1.6e-23 113.6 86 60.5
BolC9t57695H Brassica oleracea HOM05D005251 ORTHO05D006680 1.6e-23 113.6 86 60.5
AL8G32750 Arabidopsis lyrata HOM05D005251 ORTHO05D006680 2.1e-23 113.2 86 60.5
AT5G56900 Arabidopsis thaliana HOM05D005251 ORTHO05D006680 2.1e-23 113.2 86 60.5
Carub.0008s1736 Capsella rubella HOM05D005251 ORTHO05D006680 2.1e-23 113.2 86 60.5
Medtr4g126260 Medicago truncatula HOM05D005251 ORTHO05D006680 2.1e-23 113.2 85 64.7
Thhalv10013022m.g Eutrema salsugineum HOM05D005251 ORTHO05D006680 2.8e-23 112.8 86 61.6
PSO210G1153 Papaver somniferum HOM05D005251 ORTHO05D006680 3.6e-23 112.5 85 60.0
PSO210G7113 Papaver somniferum HOM05D005251 ORTHO05D006680 3.6e-23 112.5 85 60.0
BcaB08g36046 Brassica carinata HOM05D005251 ORTHO05D006680 4.7e-23 112.1 86 60.5
A10p14170 Brassica napus HOM05D005251 ORTHO05D006680 4.7e-23 112.1 86 59.3
BraA10t43510Z Brassica rapa HOM05D005251 ORTHO05D006680 4.7e-23 112.1 86 59.3
Zm00001eb311020 Zea mays HOM05D005251 ORTHO05D006680 6.2e-23 111.7 79 62.0
Os09g0364000 Oryza sativa ssp. japonica HOM05D005251 ORTHO05D006680 1.4e-22 110.5 100 54.0
Pp3c16_14300 Physcomitrium patens HOM05D005251 ORTHO05D006680 3.1e-22 109.4 79 59.5
VMungo1215G2738 Vigna mungo HOM05D005251 ORTHO05D006680 6.8e-22 108.2 93 57.0
Haze_25916 Corylus avellana HOM05D005251 ORTHO05D006680 2.0e-21 106.7 74 68.9
ATR0789G159 Amborella trichopoda HOM05D005251 ORTHO05D006680 9.8e-21 104.4 91 54.9
SEGI_26696 Sequoiadendron giganteum HOM05D005251 ORTHO05D006680 2.2e-20 103.2 89 51.7
arahy.Tifrunner.gnm1.ann1.BFBS1X Arachis hypogaea HOM05D005251 ORTHO05D006680 4.9e-20 102.1 82 61.0
SMO147G0126 Selaginella moellendorffii HOM05D005251 ORTHO05D006680 1.1e-19 100.9 83 54.2
SMO273G0018 Selaginella moellendorffii HOM05D005251 ORTHO05D006680 1.1e-19 100.9 83 54.2
Sabra06G0120400 Salix brachista HOM05D005251 ORTHO05D006680 9.2e-19 97.8 74 60.8
Mapoly0009s0116 Marchantia polymorpha HOM05D005251 ORTHO05D006680 6.2e-15 85.1 79 46.8
Cre07.g338900 Chlamydomonas reinhardtii HOM05D005251 ORTHO05D006680 1.1e-11 74.3 79 44.3
PRCOL_00000275 Prasinoderma coloniale HOM05D005251 ORTHO05D006680 1.2e-10 70.9 73 42.5
AagrBONN_evm.TU.Sc2ySwM_228.1764 Anthoceros agrestis HOM05D005251 ORTHO05D006680 6.0e-10 68.6 61 49.2
VMungo1383G3543 Vigna mungo HOM05D005251 ORTHO05D006680 4.7e-07 58.9 45 60.0
CANSAT11G0466 Cannabis sativa HOM05D003636 ORTHO05D005160 8.9e-06 54.7 86 31.4


User provided reference genes

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