Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen05g018720 Solanum pennellii HOM05D007298 ORTHO05D009226 3.6e-146 521.5 262 100.0
Solyc05g024020.1 Solanum lycopersicum HOM05D007298 ORTHO05D009226 1.5e-139 499.6 258 97.7
PGSC0003DMG400025413 Solanum tuberosum HOM05D007298 ORTHO05D009226 2.4e-126 455.7 269 88.1
Peaxi162Scf00128g01770 Petunia axillaris HOM05D007298 ORTHO05D009226 1.1e-86 323.9 282 66.0
Nitab4.5_0008442g0010 Nicotiana tabacum HOM05D007298 ORTHO05D009226 7.4e-83 311.2 293 63.8
Nitab4.5_0007554g0010 Nicotiana tabacum HOM05D007298 ORTHO05D009226 2.2e-71 273.1 281 60.9
Nitab4.5_0001600g0070 Nicotiana tabacum HOM05D005538 ORTHO05D007055 2.7e-69 266.2 278 58.6
Cc11_g17470 Coffea canephora HOM05D007298 ORTHO05D009226 9.5e-54 214.5 271 47.2
Hma1.2p1_1436F.1_g283160 Hydrangea macrophylla HOM05D007298 ORTHO05D009226 1.2e-53 214.2 275 51.3
Cfa009528 Carpinus fangiana HOM05D007298 ORTHO05D009226 1.6e-53 213.8 281 48.8
CiPaw.13G179900 Carya illinoinensis HOM05D007298 ORTHO05D009226 2.8e-53 213.0 278 48.6
Lj4g0005920 Lotus japonicus HOM05D007298 ORTHO05D009226 1.2e-51 207.6 262 46.9
vmacro16084 Vaccinium macrocarpon HOM05D007298 ORTHO05D009226 4.4e-51 205.7 281 45.6
CSS0015764 Camellia sinensis var. sinensis HOM05D007298 ORTHO05D009226 9.8e-51 204.5 265 46.8
Gohir.A12G186800 Gossypium hirsutum HOM05D007298 ORTHO05D009226 6.3e-50 201.8 277 47.7
Gohir.D12G189800 Gossypium hirsutum HOM05D007298 ORTHO05D009226 6.3e-50 201.8 277 47.7
Thecc.03G118900 Theobroma cacao HOM05D007298 ORTHO05D009226 6.3e-50 201.8 278 47.1
Actinidia30606 Actinidia chinensis HOM05D007298 ORTHO05D009226 1.1e-49 201.1 265 49.4
Lalb_Chr16g0383911 Lupinus albus HOM05D007298 ORTHO05D009226 1.4e-49 200.7 272 46.3
Gorai.008G203600 Gossypium raimondii HOM05D007298 ORTHO05D009226 2.4e-49 199.9 277 47.3
COL.COLO4_37432 Corchorus olitorius HOM05D007298 ORTHO05D009226 9.2e-49 198.0 281 45.6
Rhsim12G0097800 Rhododendron simsii HOM05D007298 ORTHO05D009226 2.7e-48 196.4 277 46.9
Nn2g15906 Nelumbo nucifera HOM05D007298 ORTHO05D009226 2.9e-47 193.0 286 43.7
TAR623G1587 Trochodendron aralioides HOM05D007298 ORTHO05D009226 3.9e-47 192.6 259 47.9
Phvul.002G230700 Phaseolus vulgaris HOM05D007298 ORTHO05D009226 1.1e-46 191.0 256 46.9
Sabra01G0000900 Salix brachista HOM05D007298 ORTHO05D009226 2.5e-46 189.9 284 44.4
Glyma.07G199400 Glycine max HOM05D007298 ORTHO05D009226 3.3e-46 189.5 260 46.5
Duzib205G1649 Durio zibethinus HOM05D007298 ORTHO05D009226 4.3e-46 189.1 270 44.4
Psat7g113280 Pisum sativum HOM05D007298 ORTHO05D009226 4.3e-46 189.1 269 45.7
Potri.001G001000 Populus trichocarpa HOM05D007298 ORTHO05D009226 7.3e-46 188.3 275 44.0
VMungo0251G1522 Vigna mungo HOM05D007298 ORTHO05D009226 1.2e-45 187.6 251 47.8
QL01p007822 Quercus lobata HOM05D007298 ORTHO05D009226 1.4e-44 184.1 252 48.8
ClCG06G017280 Citrullus lanatus HOM05D007298 ORTHO05D009226 4.0e-44 182.6 262 46.6
Glyma.13G177000 Glycine max HOM05D007298 ORTHO05D009226 5.2e-44 182.2 267 43.4
Medtr4g088515 Medicago truncatula HOM05D000062 ORTHO05D000043 5.2e-44 182.2 264 44.7
CsaV3_1G001220 Cucumis sativus L. HOM05D007298 ORTHO05D009226 8.9e-44 181.4 262 45.8
MBI13_g02430_MAGBIO Magnolia biondii HOM05D007298 ORTHO05D009226 8.9e-44 181.4 278 43.2
Lalb_Chr05g0218531 Lupinus albus HOM05D007298 ORTHO05D009226 2.0e-43 180.3 263 45.6
Lalb_Chr09g0327771 Lupinus albus HOM05D007298 ORTHO05D009226 2.6e-43 179.9 263 43.7
PGR119G1464 Punica granatum HOM05D007298 ORTHO05D009226 2.6e-43 179.9 253 47.0
Haze_22918 Corylus avellana HOM05D007298 ORTHO05D009226 4.4e-43 179.1 281 45.2
MELO3C026268.2 Cucumis melo HOM05D007298 ORTHO05D009226 9.8e-43 177.9 262 45.4
Migut.K01030 Erythranthe guttata HOM05D007298 ORTHO05D009226 1.3e-42 177.6 256 45.7
Aqoxy2G04036 Aquilegia oxysepala HOM05D007298 ORTHO05D009226 2.9e-42 176.4 264 44.3
Ca_18576_v3 Cicer arietinum L. HOM05D007298 ORTHO05D009226 4.9e-42 175.6 272 42.6
Nn7g35796 Nelumbo nucifera HOM05D007298 ORTHO05D009226 8.3e-42 174.9 276 42.8
TPR.G16338 Trifolium pratense HOM05D007298 ORTHO05D009226 1.4e-41 174.1 273 42.1
Lsat_1_v5_gn_4_2201 Lactuca sativa HOM05D007298 ORTHO05D009226 3.2e-41 172.9 254 44.5
Sed0017427 Sechium edule HOM05D007298 ORTHO05D009226 3.2e-41 172.9 271 45.0
TWI32G0891 Tripterygium wilfordii HOM05D007298 ORTHO05D009226 7.0e-41 171.8 272 44.1
Manes.15G111000 Manihot esculenta HOM05D007298 ORTHO05D009226 1.0e-39 167.9 256 42.6
Sc05g0003880 Simmondsia chinensis HOM05D007298 ORTHO05D009226 1.3e-39 167.5 272 43.0
Ciclev10017525m.g Citrus clementina HOM05D007298 ORTHO05D009226 5.0e-39 165.6 230 49.1
Actinidia09612 Actinidia chinensis HOM05D007298 ORTHO05D009226 1.5e-38 164.1 254 40.9
BcaC06g32750 Brassica carinata HOM05D007298 ORTHO05D009226 1.9e-38 163.7 270 41.9
Duzib084G1143 Durio zibethinus HOM05D007298 ORTHO05D009226 5.6e-38 162.2 178 52.2
C07p54880 Brassica napus HOM05D007298 ORTHO05D009226 9.5e-38 161.4 271 41.7
BolC7t45976H Brassica oleracea HOM05D007298 ORTHO05D009226 9.5e-38 161.4 271 41.7
arahy.Tifrunner.gnm1.ann1.IS7ZQD Arachis hypogaea HOM05D002349 ORTHO05D002464 1.6e-37 160.6 267 41.2
arahy.Tifrunner.gnm1.ann1.MB6W4F Arachis hypogaea HOM05D002349 ORTHO05D002464 1.6e-37 160.6 267 41.2
AUR62033147 Chenopodium quinoa HOM05D007298 ORTHO05D009226 1.6e-37 160.6 226 44.7
CARHR233970 Cardamine hirsuta HOM05D007298 ORTHO05D009226 4.7e-37 159.1 286 41.3
Dinv31519 Davidia involucrata HOM05D007298 ORTHO05D009226 4.7e-37 159.1 219 48.4
AUR62008624 Chenopodium quinoa HOM05D007298 ORTHO05D009226 8.0e-37 158.3 227 44.1
A03p56680 Brassica napus HOM05D007298 ORTHO05D009226 1.1e-36 157.9 270 41.1
BraA03t14738Z Brassica rapa HOM05D007298 ORTHO05D009226 1.1e-36 157.9 270 41.1
Sp7g24320 Schrenkiella parvula HOM05D007298 ORTHO05D009226 1.8e-36 157.1 279 40.9
AL7G26540 Arabidopsis lyrata HOM05D007298 ORTHO05D009226 1.5e-35 154.1 283 40.3
Carub.0007s1454 Capsella rubella HOM05D007298 ORTHO05D009226 1.5e-35 154.1 282 41.5
Eucgr.J01725 Eucalyptus grandis HOM05D007298 ORTHO05D009226 1.5e-35 154.1 261 42.9
AT4G26415 Arabidopsis thaliana HOM05D007298 ORTHO05D009226 4.4e-35 152.5 283 39.9
Thhalv10026008m.g Eutrema salsugineum HOM05D007298 ORTHO05D009226 7.5e-35 151.8 275 41.1
MD11G1000700 Malus domestica HOM05D007298 ORTHO05D009226 7.5e-35 151.8 237 42.6
SGA_v2.0_scaffold9G04794 Striga asiatica HOM05D002076 ORTHO05D002087 2.9e-34 149.8 253 40.3
EL10Ac4g07728 Beta vulgaris HOM05D007298 ORTHO05D009226 4.9e-34 149.1 241 42.3
Hma1.2p1_0459F.1_g157260 Hydrangea macrophylla HOM05D007298 ORTHO05D009226 4.9e-34 149.1 205 48.8
HanXRQChr12g0385721 Helianthus annuus HOM05D007298 ORTHO05D009226 1.1e-33 147.9 203 46.3
BcaNung02423 Brassica carinata HOM05D007298 ORTHO05D009226 1.9e-33 147.1 268 40.3
Ah.08g213460 Amaranthus hybridus HOM05D007298 ORTHO05D009226 9.2e-33 144.8 262 40.8
FvH4_3g45980 Fragaria vesca HOM05D007298 ORTHO05D009226 9.2e-33 144.8 323 36.2
RcHm_v2.0_Chr5g0084091 Rosa chinensis HOM05D007298 ORTHO05D009226 9.2e-33 144.8 345 35.7
FAN16G2589 Fragaria x ananassa HOM05D007298 ORTHO05D009226 1.2e-32 144.4 324 36.7
SalBow2G0405 Salvia bowleyana HOM05D007298 ORTHO05D009226 4.6e-32 142.5 237 41.8
SalBow2G1404 Salvia bowleyana HOM05D007298 ORTHO05D009226 4.6e-32 142.5 237 41.8
FAN11G2203 Fragaria x ananassa HOM05D007298 ORTHO05D009226 3.9e-31 139.4 319 36.1
Cpa.g.sc119.13 Carica papaya HOM05D007298 ORTHO05D009226 5.1e-31 139.0 273 39.2
FAN21G1139 Fragaria x ananassa HOM05D007298 ORTHO05D009226 5.1e-31 139.0 320 36.2
THA.LOC104813474 Tarenaya hassleriana HOM05D007298 ORTHO05D009226 8.6e-31 138.3 230 43.5
FAN25G2175 Fragaria x ananassa HOM05D007298 ORTHO05D009226 1.1e-30 137.9 275 39.6
DCAR_006994 Daucus carota HOM05D007298 ORTHO05D009226 1.6e-29 134.0 244 42.2
DCAR_006996 Daucus carota HOM05D007298 ORTHO05D009226 1.6e-29 134.0 244 42.2
Sed0020092 Sechium edule HOM05D007298 ORTHO05D009226 3.6e-29 132.9 193 46.6
Prupe.6G001000 Prunus persica HOM05D007298 ORTHO05D009226 3.1e-28 129.8 316 34.5
unitig_22.g6385 Utricularia gibba HOM05D007298 ORTHO05D009226 5.8e-27 125.6 178 42.7
CANSAT11G1103 Cannabis sativa HOM05D007298 ORTHO05D009226 3.2e-25 119.8 230 40.0
ATR0068G085 Amborella trichopoda HOM05D007298 ORTHO05D009226 1.5e-22 110.9 327 32.1
Glyma.15G076400 Glycine max HOM05D007298 ORTHO05D009226 2.5e-22 110.2 205 39.5
Zm00001eb127960 Zea mays HOM05D007298 ORTHO05D009226 2.4e-20 103.6 164 40.2
Nitab4.5_0000340g0060 Nicotiana tabacum HOM05D007298 ORTHO05D009226 3.2e-17 93.2 82 64.6
Glyma.13G237100 Glycine max HOM05D007298 ORTHO05D009226 4.2e-17 92.8 129 45.0
Phvul.006G183700 Phaseolus vulgaris HOM05D007298 ORTHO05D009226 1.0e-15 88.2 201 34.8
CDE07G0295 Ceratophyllum demersum HOM05D000114 ORTHO05D000038 1.3e-13 81.3 109 48.6
C01p22230 Brassica napus HOM05D007298 ORTHO05D009226 6.0e-08 62.4 110 32.7
BolC1t02153H Brassica oleracea HOM05D007298 ORTHO05D009226 6.0e-08 62.4 110 32.7
BcaC09g50696 Brassica carinata HOM05D007298 ORTHO05D009226 1.3e-07 61.2 104 33.7
SEGI_13333 Sequoiadendron giganteum HOM05D007298 ORTHO05D009226 2.3e-07 60.5 147 34.0


User provided reference genes

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