Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen05g007730 Solanum pennellii HOM05D006937 ORTHO05D008747 3.2e-75 285.0 147 100.0
PGSC0003DMG401028340 Solanum tuberosum HOM05D006937 ORTHO05D008747 3.9e-73 278.1 147 96.6
CAN.G1642.3 Capsicum annuum HOM05D006937 ORTHO05D008747 1.1e-67 260.0 147 87.8
CAN.G964.22 Capsicum annuum HOM05D006937 ORTHO05D008747 3.5e-66 255.0 147 87.1
CSS0011527 Camellia sinensis var. sinensis HOM05D006937 ORTHO05D008747 8.7e-65 250.4 147 84.4
Dinv34099 Davidia involucrata HOM05D003669 ORTHO05D005046 4.8e-63 244.6 141 85.1
Gohir.D05G305600 Gossypium hirsutum HOM05D006937 ORTHO05D008747 8.2e-63 243.8 144 81.2
Glyma.01G053200 Glycine max HOM05D006937 ORTHO05D008747 1.1e-62 243.4 145 80.7
Gorai.009G325600 Gossypium raimondii HOM05D006937 ORTHO05D008747 1.4e-62 243.0 144 80.6
VMungo1215G2773 Vigna mungo HOM05D006937 ORTHO05D008747 1.8e-62 242.7 144 79.9
DCAR_018308 Daucus carota HOM05D006937 ORTHO05D008747 4.1e-62 241.5 143 83.9
QL03p069840 Quercus lobata HOM05D006937 ORTHO05D008747 4.1e-62 241.5 145 81.4
MELO3C024261.2 Cucumis melo HOM05D006937 ORTHO05D008747 5.3e-62 241.1 143 81.1
Gohir.A05G305601 Gossypium hirsutum HOM05D006937 ORTHO05D008747 5.3e-62 241.1 144 80.6
Glyma.02G111700 Glycine max HOM05D006937 ORTHO05D008747 6.9e-62 240.7 145 80.0
Sed0004013 Sechium edule HOM05D006937 ORTHO05D008747 6.9e-62 240.7 145 79.3
Sed0007221 Sechium edule HOM05D006937 ORTHO05D008747 9.0e-62 240.4 144 80.6
CsaV3_7G033500 Cucumis sativus L. HOM05D006937 ORTHO05D008747 1.5e-61 239.6 143 80.4
TAR629G2875 Trochodendron aralioides HOM05D006937 ORTHO05D008747 2.6e-61 238.8 147 77.6
Phvul.001G169600 Phaseolus vulgaris HOM05D006937 ORTHO05D008747 4.5e-61 238.0 145 78.6
Manes.01G032100 Manihot esculenta HOM05D006937 ORTHO05D008747 5.9e-61 237.7 144 79.2
CiPaw.06G089000 Carya illinoinensis HOM05D006937 ORTHO05D008747 7.6e-61 237.3 143 79.7
Cc11_g12540 Coffea canephora HOM05D006937 ORTHO05D008747 7.6e-61 237.3 142 83.1
GSVIVG01025409001 Vitis vinifera HOM05D006937 ORTHO05D008747 1.0e-60 236.9 144 79.9
MSTRG.2329 Avicennia marina HOM05D006937 ORTHO05D008747 1.3e-60 236.5 141 80.9
Thecc.02G339100 Theobroma cacao HOM05D006937 ORTHO05D008747 2.2e-60 235.7 144 79.2
Migut.E00068 Erythranthe guttata HOM05D006937 ORTHO05D008747 2.9e-60 235.3 138 80.4
Atru.chr11.1713 Acer truncatum HOM05D006937 ORTHO05D008747 6.5e-60 234.2 145 80.0
Ciclev10032989m.g Citrus clementina HOM05D006937 ORTHO05D008747 8.5e-60 233.8 143 79.0
MD16G1066900 Malus domestica HOM05D006937 ORTHO05D008747 8.5e-60 233.8 144 77.1
MD13G1068100 Malus domestica HOM05D006937 ORTHO05D008747 1.1e-59 233.4 143 78.3
Prupe.1G280000 Prunus persica HOM05D006937 ORTHO05D008747 1.4e-59 233.0 144 77.8
Nn3g17337 Nelumbo nucifera HOM05D006937 ORTHO05D008747 1.9e-59 232.6 147 78.2
SGA_v2.0_scaffold287G47146 Striga asiatica HOM05D006937 ORTHO05D008747 1.9e-59 232.6 141 80.1
ATR0730G163 Amborella trichopoda HOM05D006937 ORTHO05D008747 2.5e-59 232.3 141 80.1
Lj1g0016193 Lotus japonicus HOM05D006937 ORTHO05D008747 2.5e-59 232.3 144 76.4
Potri.008G091400 Populus trichocarpa HOM05D006937 ORTHO05D008747 2.5e-59 232.3 145 77.2
COL.COLO4_27967 Corchorus olitorius HOM05D006937 ORTHO05D008747 3.2e-59 231.9 144 75.7
Eucgr.G02475 Eucalyptus grandis HOM05D006937 ORTHO05D008747 3.2e-59 231.9 143 79.7
Nitab4.5_0000391g0170 Nicotiana tabacum HOM05D006937 ORTHO05D008747 9.4e-59 230.3 147 81.6
Lj6g0000786 Lotus japonicus HOM05D006937 ORTHO05D008747 1.6e-58 229.6 144 75.7
TWI60G0457 Tripterygium wilfordii HOM05D006937 ORTHO05D008747 1.6e-58 229.6 139 80.6
EL10Ac6g13467 Beta vulgaris HOM05D006937 ORTHO05D008747 3.6e-58 228.4 141 80.1
CANSAT64G0520 Cannabis sativa HOM05D006937 ORTHO05D008747 6.1e-58 227.6 144 74.3
Lalb_Chr10g0098481 Lupinus albus HOM05D006937 ORTHO05D008747 6.1e-58 227.6 141 77.3
SGA_v2.0_scaffold114G32026 Striga asiatica HOM05D006937 ORTHO05D008747 1.8e-57 226.1 151 75.5
ECA246G2190 Erigeron canadensis HOM05D006937 ORTHO05D008747 3.0e-57 225.3 141 78.7
Medtr5g042620 Medicago truncatula HOM05D006937 ORTHO05D008747 3.9e-57 224.9 144 70.8
Nitab4.5_0008978g0010 Nicotiana tabacum HOM05D006937 ORTHO05D008747 5.1e-57 224.6 194 66.5
Lj3A1033G46 Lonicera japonica HOM05D006937 ORTHO05D008747 1.9e-56 222.6 131 84.7
unitig_744.g24284 Utricularia gibba HOM05D006937 ORTHO05D008747 1.9e-56 222.6 153 73.9
Lsat_1_v5_gn_3_20221 Lactuca sativa HOM05D006937 ORTHO05D008747 4.3e-56 221.5 142 76.1
FvH4_4g30700 Fragaria vesca HOM05D006937 ORTHO05D008747 5.7e-56 221.1 144 72.2
FAN17G2174 Fragaria x ananassa HOM05D006937 ORTHO05D008747 7.4e-56 220.7 144 72.2
Haze_11954 Corylus avellana HOM05D006937 ORTHO05D008747 9.7e-56 220.3 154 73.4
Aqoxy3G03499 Aquilegia oxysepala HOM05D006937 ORTHO05D008747 1.7e-55 219.5 140 76.4
Aqoxy5G02063 Aquilegia oxysepala HOM05D006937 ORTHO05D008747 1.7e-55 219.5 140 76.4
HanXRQChr17g0537301 Helianthus annuus HOM05D006937 ORTHO05D008747 1.7e-55 219.5 140 75.0
FAN07G0310 Fragaria x ananassa HOM05D006937 ORTHO05D008747 2.2e-55 219.2 144 72.2
RcHm_v2.0_Chr4g0439101 Rosa chinensis HOM05D006937 ORTHO05D008747 2.2e-55 219.2 144 71.5
Os07g0595800 Oryza sativa ssp. japonica HOM05D006937 ORTHO05D008747 8.2e-55 217.2 140 72.9
arahy.Tifrunner.gnm1.ann1.TRF8LB Arachis hypogaea HOM05D006937 ORTHO05D008747 1.1e-54 216.9 145 73.1
Eucgr.D01709 Eucalyptus grandis HOM05D006937 ORTHO05D008747 1.8e-54 216.1 143 76.2
Zm00001eb326530 Zea mays HOM05D006937 ORTHO05D008747 1.8e-54 216.1 141 71.6
Oeu016239.1 Olea europaea HOM05D006937 ORTHO05D008747 1.5e-53 213.0 129 83.7
PSO675G6138 Papaver somniferum HOM05D006937 ORTHO05D008747 1.5e-53 213.0 140 73.6
TPR.G19944 Trifolium pratense HOM05D006937 ORTHO05D008747 1.5e-53 213.0 144 68.8
Hund25447 Selenicereus undatus HOM05D006937 ORTHO05D008747 3.4e-53 211.8 143 76.2
arahy.Tifrunner.gnm1.ann1.A48TS2 Arachis hypogaea HOM05D006937 ORTHO05D008747 1.3e-52 209.9 152 69.7
arahy.Tifrunner.gnm1.ann1.8BL9U8 Arachis hypogaea HOM05D006937 ORTHO05D008747 1.7e-52 209.5 145 71.7
AUR62024142 Chenopodium quinoa HOM05D006937 ORTHO05D008747 1.7e-52 209.5 143 74.8
Duzib268G1027 Durio zibethinus HOM05D006937 ORTHO05D008747 2.9e-52 208.8 144 72.2
SEGI_41088 Sequoiadendron giganteum HOM05D006937 ORTHO05D008747 1.2e-50 203.4 135 72.6
Actinidia31958 Actinidia chinensis HOM05D003669 ORTHO05D005046 1.6e-50 203.0 148 73.6
AUR62005588 Chenopodium quinoa HOM05D006937 ORTHO05D008747 1.6e-50 203.0 139 74.1
Psat2g127680 Pisum sativum HOM05D006937 ORTHO05D008747 3.6e-50 201.8 130 72.3
Rhsim12G0077900 Rhododendron simsii HOM05D006937 ORTHO05D008747 3.3e-48 195.3 111 84.7
PGR119G1353 Punica granatum HOM05D006937 ORTHO05D008747 9.7e-48 193.7 148 66.9
PGR142G2813 Punica granatum HOM05D006937 ORTHO05D008747 9.7e-48 193.7 143 67.8
PSO541G5056 Papaver somniferum HOM05D006937 ORTHO05D008747 1.1e-46 190.3 140 67.9
Aqoxy5G02982 Aquilegia oxysepala HOM05D006937 ORTHO05D008747 1.2e-45 186.8 140 67.9
Sc11g0000570 Simmondsia chinensis HOM05D006937 ORTHO05D008747 1.3e-44 183.3 109 80.7
CDE11G0882 Ceratophyllum demersum HOM05D006937 ORTHO05D008747 2.1e-42 176.0 156 60.9
Peaxi162Scf00222g00024 Petunia axillaris HOM05D006937 ORTHO05D008747 8.0e-42 174.1 116 77.6
AagrBONN_evm.TU.Sc2ySwM_228.447 Anthoceros agrestis HOM05D006937 ORTHO05D008747 6.7e-41 171.0 145 56.6
Ca_04880_v3 Cicer arietinum L. HOM05D006937 ORTHO05D008747 8.8e-41 170.6 110 70.0
FAN12G3635 Fragaria x ananassa HOM05D006937 ORTHO05D008747 2.0e-40 169.5 124 68.5
THA.LOC104808654 Tarenaya hassleriana HOM05D006937 ORTHO05D008747 1.7e-39 166.4 143 57.3
Mapoly0006s0094 Marchantia polymorpha HOM05D006937 ORTHO05D008747 2.2e-39 166.0 138 57.2
HPP92_013408 Vanilla planifolia HOM05D006937 ORTHO05D008747 2.8e-39 165.6 126 65.1
AL1G39070 Arabidopsis lyrata HOM05D006937 ORTHO05D008747 1.1e-38 163.7 143 55.9
SHI35111 Sapria himalayana HOM05D006937 ORTHO05D008747 4.1e-38 161.8 141 60.3
Pp3c21_19110 Physcomitrium patens HOM05D006937 ORTHO05D008747 5.3e-38 161.4 133 58.6
Carub.0001s2437 Capsella rubella HOM05D006937 ORTHO05D008747 7.0e-38 161.0 143 55.2
BcaB03g14081 Brassica carinata HOM05D006937 ORTHO05D008747 1.6e-37 159.8 143 55.2
Thhalv10008997m.g Eutrema salsugineum HOM05D006937 ORTHO05D008747 1.6e-37 159.8 143 53.8
AT1G26660 Arabidopsis thaliana HOM05D006937 ORTHO05D008747 2.0e-37 159.5 143 54.5
Aa31LG7G8430 Aethionema arabicum HOM05D006937 ORTHO05D008747 2.6e-37 159.1 145 54.5
BcaC06g35132 Brassica carinata HOM05D006937 ORTHO05D008747 5.9e-37 157.9 143 54.5
A07p13030 Brassica napus HOM05D001252 ORTHO05D005295 5.9e-37 157.9 143 54.5
Sp6g00050 Schrenkiella parvula HOM05D006937 ORTHO05D008747 5.9e-37 157.9 143 53.1
BcaB05g21932 Brassica carinata HOM05D006937 ORTHO05D008747 1.0e-36 157.1 143 53.8
BraA07t29074Z Brassica rapa HOM05D001252 ORTHO05D005295 1.3e-36 156.8 143 53.8
C07p19480 Brassica napus HOM05D001252 ORTHO05D005295 1.5e-35 153.3 143 53.1
BolC7t42467H Brassica oleracea HOM05D001252 ORTHO05D001661 1.5e-35 153.3 143 53.1
CBR_g48697 Chara braunii HOM05D006937 ORTHO05D008747 2.5e-35 152.5 139 48.9
Sabra08G0068400 Salix brachista HOM05D006937 ORTHO05D008747 5.2e-33 144.8 116 62.1
CSS0016362 Camellia sinensis var. sinensis HOM05D006937 ORTHO05D008747 3.3e-32 142.1 151 57.0
arahy.Tifrunner.gnm1.ann1.J4SELD Arachis hypogaea HOM05D006937 ORTHO05D008747 4.4e-32 141.7 104 67.3
Ah.02g130690 Amaranthus hybridus HOM05D006937 ORTHO05D008747 1.4e-30 136.7 143 53.8
SalBow8G3842 Salvia bowleyana HOM05D006937 ORTHO05D008747 7.0e-30 134.4 141 51.8
ClCG09G001850 Citrullus lanatus HOM05D006937 ORTHO05D008747 4.7e-26 121.7 78 78.2
PSO357G0488 Papaver somniferum HOM05D006937 ORTHO05D008747 1.2e-24 117.1 81 70.4
arahy.Tifrunner.gnm1.ann1.K4YSPN Arachis hypogaea HOM05D006937 ORTHO05D008747 5.4e-22 108.2 65 78.5
A09p40080 Brassica napus HOM05D004525 ORTHO05D005295 1.1e-14 84.0 75 53.3
Potri.010G163600 Populus trichocarpa HOM05D006937 ORTHO05D008747 7.0e-14 81.3 155 40.6
Sabra10G0124400 Salix brachista HOM05D006937 ORTHO05D008747 7.0e-14 81.3 108 45.4
BcaC05g26400 Brassica carinata HOM05D004525 ORTHO05D005295 1.2e-13 80.5 61 60.7
Cpa.g.sc1.69 Carica papaya HOM05D006937 ORTHO05D008747 2.6e-08 62.8 37 78.4
PRCOL_00006274 Prasinoderma coloniale HOM05D006937 ORTHO05D008747 2.9e-07 59.3 147 32.7
Cc00_g19610 Coffea canephora HOM05D000421 ORTHO05D013979 4.1e-06 55.5 34 76.5
Cc08_g04320 Coffea canephora HOM05D006937 ORTHO05D013979 4.1e-06 55.5 34 76.5


User provided reference genes

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