Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen05g007620 Solanum pennellii HOM05D008447 ORTHO05D010638 1.0e-282 976.1 498 100.0
Solyc05g012800.1 Solanum lycopersicum HOM05D008447 ORTHO05D010638 3.0e-274 948.0 498 97.0
PGSC0003DMG400028389 Solanum tuberosum HOM05D008447 ORTHO05D010638 1.0e-258 896.3 498 92.0
Peaxi162Scf00285g00227 Petunia axillaris HOM05D008447 ORTHO05D010638 1.4e-186 656.8 494 70.4
Nitab4.5_0008022g0020 Nicotiana tabacum HOM05D008447 ORTHO05D010638 3.5e-182 642.1 527 66.8
Dinv18105 Davidia involucrata HOM05D008447 ORTHO05D010638 7.3e-180 634.4 484 67.4
Nitab4.5_0000016g0020 Nicotiana tabacum HOM05D008447 ORTHO05D010638 4.3e-172 608.6 527 63.8
TAR369G0905 Trochodendron aralioides HOM05D008447 ORTHO05D010638 9.5e-172 607.4 493 62.1
GSVIVG01033352001 Vitis vinifera HOM05D008447 ORTHO05D010638 1.5e-164 583.6 469 65.5
Rhsim04G0099000 Rhododendron simsii HOM05D008447 ORTHO05D010638 4.3e-164 582.0 550 56.9
Cfa016881 Carpinus fangiana HOM05D008447 ORTHO05D010638 1.6e-163 580.1 487 60.6
Ciclev10004787m.g Citrus clementina HOM05D008447 ORTHO05D010638 4.7e-163 578.6 488 61.7
Migut.J01799 Erythranthe guttata HOM05D008447 ORTHO05D010638 1.1e-162 577.4 463 64.1
Prupe.7G070400 Prunus persica HOM05D008447 ORTHO05D010638 2.6e-161 572.8 487 61.0
Thecc.05G165700 Theobroma cacao HOM05D008447 ORTHO05D010638 1.3e-160 570.5 482 60.4
Nn7g36103 Nelumbo nucifera HOM05D008447 ORTHO05D010638 2.2e-160 569.7 494 59.3
Atru.chr1.942 Acer truncatum HOM05D008447 ORTHO05D010638 8.4e-160 567.8 497 60.8
MD12G1063100 Malus domestica HOM05D008447 ORTHO05D010638 7.1e-159 564.7 487 59.8
Aqoxy1G00302 Aquilegia oxysepala HOM05D008447 ORTHO05D010638 3.0e-157 559.3 491 61.1
COL.COLO4_28736 Corchorus olitorius HOM05D008447 ORTHO05D010638 3.0e-157 559.3 480 60.2
Gorai.002G037200 Gossypium raimondii HOM05D008447 ORTHO05D010638 6.6e-157 558.1 482 60.6
PSO384G3680 Papaver somniferum HOM05D008447 ORTHO05D010638 6.6e-157 558.1 494 58.5
PGR004G0530 Punica granatum HOM05D008447 ORTHO05D010638 1.7e-152 543.5 482 60.0
CANSAT80G0811 Cannabis sativa HOM05D008447 ORTHO05D010638 7.9e-150 534.6 484 59.3
CANSAT80G2072 Cannabis sativa HOM05D008447 ORTHO05D010638 1.3e-149 533.9 484 59.1
HPP92_023777 Vanilla planifolia HOM05D008447 ORTHO05D010638 3.0e-149 532.7 475 58.7
Haze_19941 Corylus avellana HOM05D008447 ORTHO05D010638 9.6e-140 501.1 483 55.1
Gohir.D01G027950 Gossypium hirsutum HOM05D008447 ORTHO05D010638 1.1e-135 487.6 485 55.1
Cpa.g.sc85.118 Carica papaya HOM05D008447 ORTHO05D010638 1.5e-132 477.2 493 53.5
Gohir.D01G027900 Gossypium hirsutum HOM05D008447 ORTHO05D010638 1.2e-118 431.0 380 59.7
Gohir.A01G040200 Gossypium hirsutum HOM05D008447 ORTHO05D010638 2.5e-116 423.3 371 59.6
Mapoly0099s0027 Marchantia polymorpha HOM05D008447 ORTHO05D010638 2.2e-115 420.2 476 49.8
SMO367G0387 Selaginella moellendorffii HOM05D008447 ORTHO05D010638 9.1e-114 414.8 476 47.1
SMO275G0044 Selaginella moellendorffii HOM05D008447 ORTHO05D010638 2.0e-113 413.7 476 46.6
Pp3c10_15450 Physcomitrium patens HOM05D008447 ORTHO05D010638 6.5e-112 408.7 472 48.7
CSS0040904 Camellia sinensis var. sinensis HOM05D008447 ORTHO05D010638 7.4e-108 395.2 411 54.3
Actinidia17252 Actinidia chinensis HOM05D008447 ORTHO05D010638 4.8e-99 365.9 310 59.4
AagrBONN_evm.TU.Sc2ySwM_228.434 Anthoceros agrestis HOM05D008447 ORTHO05D010638 6.5e-96 355.5 443 44.9
MBI01_g36431_MAGBIO Magnolia biondii HOM05D008447 ORTHO05D010638 4.2e-95 352.8 353 53.3
Hma1.2p1_0856F.1_g229060 Hydrangea macrophylla HOM05D008447 ORTHO05D010638 2.3e-93 347.1 272 67.3
PRCOL_00000676 Prasinoderma coloniale HOM05D008447 ORTHO05D010638 2.3e-72 277.3 513 38.2
QL07p022609 Quercus lobata HOM05D008447 ORTHO05D010638 4.7e-54 216.5 181 59.1
CBR_g675 Chara braunii HOM05D008447 ORTHO05D010638 1.1e-47 195.3 227 44.1
QL07p022618 Quercus lobata HOM05D008447 ORTHO05D010638 7.3e-39 166.0 151 56.3
RcHm_v2.0_Chr3g0480711 Rosa chinensis HOM05D008447 ORTHO05D010638 1.3e-38 165.2 155 51.0
Actinidia17253 Actinidia chinensis HOM05D008447 ORTHO05D010638 6.9e-29 132.9 95 70.5
RcHm_v2.0_Chr3g0480721 Rosa chinensis HOM05D008447 ORTHO05D010638 1.7e-27 128.3 131 55.7
Haze_19939 Corylus avellana HOM05D008447 ORTHO05D010638 8.1e-22 109.4 76 68.4
CSS0021541 Camellia sinensis var. sinensis HOM05D008447 ORTHO05D010638 6.9e-21 106.3 69 72.5
SEGI_28051 Sequoiadendron giganteum HOM05D008447 ORTHO05D010638 2.8e-14 84.3 60 66.7
MBI08_g35877_MAGBIO Magnolia biondii HOM05D008447 ORTHO05D010638 1.4e-13 82.0 64 59.4
SEGI_40265 Sequoiadendron giganteum HOM05D008447 ORTHO05D010638 2.9e-11 74.3 82 45.1
CBR_g671 Chara braunii HOM05D008447 ORTHO05D010638 2.1e-09 68.2 62 51.6
CBR_g32224 Chara braunii HOM05D005554 ORTHO05D007823 6.7e-08 63.2 277 26.4
CBR_g669 Chara braunii HOM05D000019 ORTHO05D000048 3.3e-07 60.8 94 42.6
AagrBONN_evm.TU.Sc2ySwM_228.1600 Anthoceros agrestis HOM05D005554 ORTHO05D007823 5.7e-07 60.1 276 25.7


User provided reference genes

Program Settings