Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen05g007430 Solanum pennellii HOM05D006961 ORTHO05D008809 1.8e-99 365.9 183 100.0
PGSC0003DMG400028327 Solanum tuberosum HOM05D006961 ORTHO05D008809 1.4e-91 339.7 189 91.5
Solyc05g012600.3 Solanum lycopersicum HOM05D006961 ORTHO05D008809 1.7e-89 332.8 183 94.0
CAN.G1340.11 Capsicum annuum HOM05D006961 ORTHO05D008809 8.0e-76 287.3 195 77.9
Nitab4.5_0000334g0230 Nicotiana tabacum HOM05D006961 ORTHO05D008809 3.7e-73 278.5 193 76.7
Peaxi162Scf00314g00025 Petunia axillaris HOM05D006961 ORTHO05D008809 9.5e-69 263.8 192 71.4
TAR622G0866 Trochodendron aralioides HOM05D006961 ORTHO05D008809 1.3e-49 200.3 175 60.6
Hma1.2p1_0357F.1_g134450 Hydrangea macrophylla HOM05D006961 ORTHO05D008809 1.7e-49 199.9 158 62.0
Eucgr.G02462 Eucalyptus grandis HOM05D006961 ORTHO05D008809 3.8e-49 198.7 123 76.4
Actinidia19920 Actinidia chinensis HOM05D006961 ORTHO05D008809 4.1e-48 195.3 170 60.6
Dinv34116 Davidia involucrata HOM05D006961 ORTHO05D008809 4.1e-48 195.3 170 61.2
SGA_v2.0_scaffold16G07754 Striga asiatica HOM05D006961 ORTHO05D008809 5.4e-48 194.9 167 62.3
GSVIVG01012179001 Vitis vinifera HOM05D006961 ORTHO05D008809 7.1e-48 194.5 131 67.9
ClCG09G020750 Citrullus lanatus HOM05D006961 ORTHO05D008809 1.6e-47 193.4 176 58.0
MELO3C002920.2 Cucumis melo HOM05D006961 ORTHO05D008809 1.6e-47 193.4 163 58.9
VMungo1215G1627 Vigna mungo HOM05D006961 ORTHO05D008809 2.1e-47 193.0 147 65.3
CSS0004568 Camellia sinensis var. sinensis HOM05D006961 ORTHO05D008809 2.7e-47 192.6 167 60.5
Gohir.A05G306100 Gossypium hirsutum HOM05D006961 ORTHO05D008809 2.7e-47 192.6 127 70.9
Gohir.D05G306100 Gossypium hirsutum HOM05D006961 ORTHO05D008809 3.5e-47 192.2 164 60.4
DCAR_027451 Daucus carota HOM05D006961 ORTHO05D008809 7.8e-47 191.0 172 60.5
Glyma.02G113800 Glycine max HOM05D006961 ORTHO05D008809 7.8e-47 191.0 124 71.0
arahy.Tifrunner.gnm1.ann1.T2VQ83 Arachis hypogaea HOM05D006961 ORTHO05D008809 1.0e-46 190.7 166 60.8
arahy.Tifrunner.gnm1.ann1.TP0XC6 Arachis hypogaea HOM05D006961 ORTHO05D008809 1.0e-46 190.7 166 60.8
CsaV3_5G025620 Cucumis sativus L. HOM05D006961 ORTHO05D008809 1.3e-46 190.3 162 58.0
PGR119G1669 Punica granatum HOM05D006961 ORTHO05D008809 1.7e-46 189.9 162 62.3
PSO017G3353 Papaver somniferum HOM05D006961 ORTHO05D008809 3.9e-46 188.7 162 57.4
COL.COLO4_27931 Corchorus olitorius HOM05D006961 ORTHO05D008809 5.1e-46 188.3 140 65.0
MSTRG.7764 Avicennia marina HOM05D006961 ORTHO05D008809 6.6e-46 188.0 140 63.6
Ciclev10032810m.g Citrus clementina HOM05D006961 ORTHO05D008809 6.6e-46 188.0 124 72.6
ECA234G0986 Erigeron canadensis HOM05D006961 ORTHO05D008809 6.6e-46 188.0 167 56.3
PSO478G0730 Papaver somniferum HOM05D006961 ORTHO05D008809 6.6e-46 188.0 137 64.2
vmacro01328 Vaccinium macrocarpon HOM05D006961 ORTHO05D008809 6.6e-46 188.0 150 64.7
Cc11_g12360 Coffea canephora HOM05D006961 ORTHO05D008809 8.7e-46 187.6 123 70.7
Medtr5g043580 Medicago truncatula HOM05D006961 ORTHO05D008809 1.1e-45 187.2 135 65.9
SalBow2G3426 Salvia bowleyana HOM05D006961 ORTHO05D008809 1.1e-45 187.2 136 67.6
CiPaw.06G090400 Carya illinoinensis HOM05D006961 ORTHO05D008809 1.5e-45 186.8 124 72.6
Ca_04910_v3 Cicer arietinum L. HOM05D006961 ORTHO05D008809 1.5e-45 186.8 138 64.5
RcHm_v2.0_Chr4g0438851 Rosa chinensis HOM05D006961 ORTHO05D008809 1.5e-45 186.8 125 72.8
Atru.chr11.1688 Acer truncatum HOM05D006961 ORTHO05D008809 1.9e-45 186.4 178 56.7
Glyma.01G055400 Glycine max HOM05D006961 ORTHO05D008809 1.9e-45 186.4 151 60.9
QL03p070935 Quercus lobata HOM05D006961 ORTHO05D008809 3.3e-45 185.7 189 53.4
Duzib268G0330 Durio zibethinus HOM05D006961 ORTHO05D008809 4.3e-45 185.3 127 67.7
Thecc.02G336300 Theobroma cacao HOM05D006961 ORTHO05D008809 4.3e-45 185.3 127 69.3
unitig_22.g6499 Utricularia gibba HOM05D006961 ORTHO05D008809 4.3e-45 185.3 186 52.2
Ah.03g139190 Amaranthus hybridus HOM05D006961 ORTHO05D008809 5.6e-45 184.9 181 56.4
CANSAT64G0471 Cannabis sativa HOM05D006961 ORTHO05D008809 5.6e-45 184.9 178 57.3
AUR62007955 Chenopodium quinoa HOM05D006961 ORTHO05D008809 5.6e-45 184.9 175 57.7
THA.LOC104824066 Tarenaya hassleriana HOM05D006961 ORTHO05D008809 5.6e-45 184.9 123 72.4
FvH4_4g30480 Fragaria vesca HOM05D006961 ORTHO05D008809 7.3e-45 184.5 125 72.0
Potri.010G161400 Populus trichocarpa HOM05D006961 ORTHO05D008809 7.3e-45 184.5 147 60.5
FAN07G0372 Fragaria x ananassa HOM05D006961 ORTHO05D008809 9.6e-45 184.1 125 71.2
FAN17G2308 Fragaria x ananassa HOM05D006961 ORTHO05D008809 9.6e-45 184.1 125 71.2
Nn3g17372 Nelumbo nucifera HOM05D006961 ORTHO05D008809 9.6e-45 184.1 120 70.8
Carub.0005s0238 Capsella rubella HOM05D006961 ORTHO05D008809 1.6e-44 183.3 181 58.6
AUR62003136 Chenopodium quinoa HOM05D006961 ORTHO05D008809 1.6e-44 183.3 179 57.0
TWI75G1056 Tripterygium wilfordii HOM05D006961 ORTHO05D008809 2.8e-44 182.6 173 55.5
Rhsim12G0076500 Rhododendron simsii HOM05D006961 ORTHO05D008809 3.6e-44 182.2 139 65.5
TPR.G24476 Trifolium pratense HOM05D006961 ORTHO05D008809 3.6e-44 182.2 166 56.6
Haze_11979 Corylus avellana HOM05D006961 ORTHO05D004702 4.7e-44 181.8 123 70.7
FAN22G0366 Fragaria x ananassa HOM05D006961 ORTHO05D008809 4.7e-44 181.8 125 70.4
AL5G13170 Arabidopsis lyrata HOM05D006961 ORTHO05D008809 6.2e-44 181.4 141 67.4
Hund05862 Selenicereus undatus HOM05D006961 ORTHO05D008809 6.2e-44 181.4 141 66.0
BcaC04g21488 Brassica carinata HOM05D006961 ORTHO05D008809 8.1e-44 181.0 139 66.2
A09p24430 Brassica napus HOM05D006961 ORTHO05D008809 8.1e-44 181.0 139 66.2
C09p31220 Brassica napus HOM05D006961 ORTHO05D008809 8.1e-44 181.0 139 66.2
BolC9t55978H Brassica oleracea HOM05D006961 ORTHO05D008809 8.1e-44 181.0 139 66.2
BraA09t38036Z Brassica rapa HOM05D006961 ORTHO05D008809 8.1e-44 181.0 139 66.2
Psat2g128160 Pisum sativum HOM05D006961 ORTHO05D008809 8.1e-44 181.0 148 61.5
Prupe.1G282200 Prunus persica HOM05D006961 ORTHO05D008809 8.1e-44 181.0 138 65.2
Aqoxy3G00448 Aquilegia oxysepala HOM05D006961 ORTHO05D008809 1.4e-43 180.3 119 68.9
Lj2g0005939 Lotus japonicus HOM05D006961 ORTHO05D008809 1.4e-43 180.3 157 58.0
AT2G03420 Arabidopsis thaliana HOM05D006961 ORTHO05D008809 2.4e-43 179.5 171 58.5
MBI16_g15564_MAGBIO Magnolia biondii HOM05D006961 ORTHO05D008809 2.4e-43 179.5 124 65.3
Aa31LG2G7160 Aethionema arabicum HOM05D006961 ORTHO05D008809 3.1e-43 179.1 138 65.9
Lalb_Chr17g0341001 Lupinus albus HOM05D006961 ORTHO05D008809 3.1e-43 179.1 139 64.0
Oeu015341.2 Olea europaea HOM05D006961 ORTHO05D008809 3.1e-43 179.1 109 76.1
CARHR145760 Cardamine hirsuta HOM05D006961 ORTHO05D008809 4.0e-43 178.7 141 66.7
Cfa008905 Carpinus fangiana HOM05D006961 ORTHO05D008809 4.0e-43 178.7 123 69.9
Migut.L01221 Erythranthe guttata HOM05D006961 ORTHO05D008809 4.0e-43 178.7 170 54.7
HanXRQChr12g0379241 Helianthus annuus HOM05D006961 ORTHO05D008809 6.9e-43 177.9 155 58.1
Lsat_1_v5_gn_4_10260 Lactuca sativa HOM05D006961 ORTHO05D008809 9.0e-43 177.6 127 65.4
EL10Ac6g14957 Beta vulgaris HOM05D006961 ORTHO05D008809 1.5e-42 176.8 123 69.9
HPP92_023640 Vanilla planifolia HOM05D006961 ORTHO05D008809 2.0e-42 176.4 128 61.7
BcaB07g30670 Brassica carinata HOM05D006961 ORTHO05D008809 2.6e-42 176.0 169 57.4
MD16G1064700 Malus domestica HOM05D006961 ORTHO05D008809 3.4e-42 175.6 126 68.3
Sed0005182 Sechium edule HOM05D006961 ORTHO05D008809 2.2e-41 172.9 146 60.3
A02p33440 Brassica napus HOM05D006961 ORTHO05D008809 3.8e-41 172.2 176 54.5
CDE07G0364 Ceratophyllum demersum HOM05D006961 ORTHO05D008809 3.8e-41 172.2 120 66.7
Lj3A1032T68 Lonicera japonica HOM05D006961 ORTHO05D008809 3.8e-41 172.2 121 71.1
Zm00001eb400470 Zea mays HOM05D006961 ORTHO05D008809 3.8e-41 172.2 125 63.2
Thhalv10005024m.g Eutrema salsugineum HOM05D006961 ORTHO05D008809 4.9e-41 171.8 169 57.4
Manes.05G107700 Manihot esculenta HOM05D006961 ORTHO05D008809 1.4e-40 170.2 122 63.9
Sp2g14330 Schrenkiella parvula HOM05D006961 ORTHO05D008809 1.9e-40 169.9 127 66.1
Cpa.g.sc1.93 Carica papaya HOM05D006961 ORTHO05D008809 2.4e-40 169.5 131 63.4
CDE04G0363 Ceratophyllum demersum HOM05D006961 ORTHO05D008809 5.4e-40 168.3 118 66.9
MD13G1065900 Malus domestica HOM05D006961 ORTHO05D008809 3.9e-38 162.2 140 60.7
ATR0111G017 Amborella trichopoda HOM05D006961 ORTHO05D008809 5.6e-37 158.3 116 60.3
Sc04g0007750 Simmondsia chinensis HOM05D006961 ORTHO05D008809 4.8e-36 155.2 100 69.0
SEGI_13566 Sequoiadendron giganteum HOM05D006961 ORTHO05D008809 9.9e-34 147.5 119 57.1
HPP92_023624 Vanilla planifolia HOM05D006961 ORTHO05D008809 3.8e-33 145.6 109 59.6
BcaC03g17213 Brassica carinata HOM05D006961 ORTHO05D008809 1.5e-29 133.7 110 64.5
C02p51430 Brassica napus HOM05D006961 ORTHO05D008809 1.5e-29 133.7 110 64.5
BolC2t11231H Brassica oleracea HOM05D006961 ORTHO05D008809 1.5e-29 133.7 110 64.5
Zm00001eb176890 Zea mays HOM05D006961 ORTHO05D008809 1.7e-25 120.2 81 65.4
Mapoly0047s0086 Marchantia polymorpha HOM05D006961 ORTHO05D008809 2.2e-25 119.8 165 40.6
Gorai.009G326100 Gossypium raimondii HOM05D006961 ORTHO05D008809 4.2e-24 115.5 125 55.2
Actinidia31945 Actinidia chinensis HOM05D006961 ORTHO05D008809 1.2e-23 114.0 81 70.4
Pp3c5_22460 Physcomitrium patens HOM05D006961 ORTHO05D008809 3.5e-23 112.5 115 50.4
AagrBONN_evm.TU.Sc2ySwM_228.3757 Anthoceros agrestis HOM05D006961 ORTHO05D008809 3.9e-22 109.0 120 45.8
SMO356G0726 Selaginella moellendorffii HOM05D006961 ORTHO05D008809 4.0e-19 99.0 124 43.5
CBR_g50745 Chara braunii HOM05D006961 ORTHO05D008809 4.2e-16 89.0 114 38.6
FAN12G0580 Fragaria x ananassa HOM05D006961 ORTHO05D008809 2.3e-14 83.2 46 76.1
SalBow2G3119 Salvia bowleyana HOM05D006961 ORTHO05D008809 3.0e-14 82.8 70 61.4
Os03g0210700 Oryza sativa ssp. japonica HOM05D006961 ORTHO05D008809 1.3e-09 67.4 50 56.0
Cre02.g114450 Chlamydomonas reinhardtii HOM05D006961 ORTHO05D008809 2.2e-09 66.6 122 39.3


User provided reference genes

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