Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen05g006230 Solanum pennellii HOM05D006650 ORTHO05D008401 2.8e-155 552.0 291 100.0
Nitab4.5_0000259g0270 Nicotiana tabacum HOM05D006650 ORTHO05D008401 1.3e-128 463.4 300 84.0
Nitab4.5_0008828g0010 Nicotiana tabacum HOM05D006650 ORTHO05D008401 7.1e-127 457.6 300 84.0
CAN.G184.36 Capsicum annuum HOM05D006650 ORTHO05D008401 6.7e-125 451.1 300 83.3
PGSC0003DMG400007519 Solanum tuberosum HOM05D006650 ORTHO05D008401 6.3e-99 364.8 219 88.1
Peaxi162Scf00188g00428 Petunia axillaris HOM05D006650 ORTHO05D008401 5.0e-96 355.1 312 67.9
Cc11_g11090 Coffea canephora HOM05D006650 ORTHO05D008401 1.6e-89 333.6 294 62.6
Atru.chr11.1444 Acer truncatum HOM05D006650 ORTHO05D008401 1.0e-85 320.9 292 62.0
Dinv27412 Davidia involucrata HOM05D006650 ORTHO05D008401 2.6e-84 316.2 241 68.9
MSTRG.800 Avicennia marina HOM05D006650 ORTHO05D008401 5.7e-84 315.1 297 59.6
Rhsim09G0116200 Rhododendron simsii HOM05D006650 ORTHO05D008401 3.7e-83 312.4 308 57.5
Migut.L01126 Erythranthe guttata HOM05D006650 ORTHO05D008401 5.3e-82 308.5 232 68.5
Rhsim09G0116700 Rhododendron simsii HOM05D006650 ORTHO05D008401 1.2e-81 307.4 312 57.4
Aqoxy3G03817 Aquilegia oxysepala HOM05D006650 ORTHO05D008401 2.7e-81 306.2 303 58.7
Ca_04377_v3 Cicer arietinum L. HOM05D006650 ORTHO05D008401 3.5e-81 305.8 294 58.2
Actinidia32425 Actinidia chinensis HOM05D006650 ORTHO05D008401 5.9e-81 305.1 240 67.1
Hma1.2p1_1424F.1_g282740 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 5.9e-81 305.1 216 71.8
Medtr6g021510 Medicago truncatula HOM05D006650 ORTHO05D008401 7.7e-81 304.7 281 59.4
Psat1g085040 Pisum sativum HOM05D006650 ORTHO05D008401 3.8e-80 302.4 290 57.2
Lj2g0026821 Lotus japonicus HOM05D006650 ORTHO05D008401 1.5e-79 300.4 305 55.1
ECA246G1261 Erigeron canadensis HOM05D006650 ORTHO05D008401 3.2e-79 299.3 241 66.8
TPR.G21643 Trifolium pratense HOM05D006650 ORTHO05D008401 4.2e-79 298.9 281 58.7
Ciclev10032286m.g Citrus clementina HOM05D006650 ORTHO05D008401 5.5e-79 298.5 267 62.2
Prupe.1G299800 Prunus persica HOM05D006650 ORTHO05D008401 7.2e-79 298.1 299 57.5
DCAR_023721 Daucus carota HOM05D006650 ORTHO05D008401 1.2e-78 297.4 274 60.9
PSO063G6309 Papaver somniferum HOM05D006650 ORTHO05D008401 1.2e-78 297.4 237 67.1
Manes.14G094300 Manihot esculenta HOM05D006650 ORTHO05D008401 2.7e-78 296.2 300 57.0
Oeu054561.2 Olea europaea HOM05D006650 ORTHO05D008401 4.7e-78 295.4 304 57.9
CARHR025730 Cardamine hirsuta HOM05D006650 ORTHO05D008401 8.0e-78 294.7 293 57.7
Thhalv10008392m.g Eutrema salsugineum HOM05D006650 ORTHO05D008401 8.0e-78 294.7 298 58.1
PSO782G4155 Papaver somniferum HOM05D006650 ORTHO05D008401 8.0e-78 294.7 283 59.7
TWI75G1831 Tripterygium wilfordii HOM05D006650 ORTHO05D008401 3.0e-77 292.7 301 56.5
THA.LOC104821976 Tarenaya hassleriana HOM05D006650 ORTHO05D008401 5.2e-77 292.0 292 55.8
Carub.0001s2478 Capsella rubella HOM05D006650 ORTHO05D008401 6.8e-77 291.6 292 58.2
Glyma.02G128500 Glycine max HOM05D006650 ORTHO05D008401 6.8e-77 291.6 289 58.1
HanXRQChr15g0475871 Helianthus annuus HOM05D006650 ORTHO05D008401 8.8e-77 291.2 225 66.2
MD13G1052300 Malus domestica HOM05D006650 ORTHO05D008401 8.8e-77 291.2 295 58.0
BolC3t19565H Brassica oleracea HOM05D006650 ORTHO05D008401 2.6e-76 289.7 292 56.2
unitig_22.g6887 Utricularia gibba HOM05D006650 ORTHO05D008401 5.7e-76 288.5 236 63.6
Sp1g22480 Schrenkiella parvula HOM05D006650 ORTHO05D008401 7.5e-76 288.1 304 55.3
ATR0691G055 Amborella trichopoda HOM05D006650 ORTHO05D008401 9.8e-76 287.7 215 69.8
AL1G39570 Arabidopsis lyrata HOM05D006650 ORTHO05D008401 1.7e-75 287.0 297 55.2
Sed0026335 Sechium edule HOM05D006650 ORTHO05D008401 2.2e-75 286.6 239 62.8
Phvul.003G034600 Phaseolus vulgaris HOM05D006650 ORTHO05D008401 3.7e-75 285.8 226 67.3
arahy.Tifrunner.gnm1.ann1.1PS8SX Arachis hypogaea HOM05D006650 ORTHO05D008401 4.8e-75 285.4 285 56.1
COL.COLO4_27715 Corchorus olitorius HOM05D006650 ORTHO05D008401 4.8e-75 285.4 234 65.0
CsaV3_6G003950 Cucumis sativus L. HOM05D006650 ORTHO05D008401 6.3e-75 285.0 244 61.5
ClCG08G004790 Citrullus lanatus HOM05D006650 ORTHO05D008401 1.1e-74 284.3 244 61.5
QL03p046578 Quercus lobata HOM05D006650 ORTHO05D008401 1.1e-74 284.3 290 54.5
Duzib248G0229 Durio zibethinus HOM05D006650 ORTHO05D008401 3.1e-74 282.7 236 64.8
CiPaw.05G118400 Carya illinoinensis HOM05D006650 ORTHO05D008401 5.4e-74 282.0 299 55.2
arahy.Tifrunner.gnm1.ann1.P12GZY Arachis hypogaea HOM05D006650 ORTHO05D008401 1.2e-73 280.8 289 56.7
CANSAT64G2403 Cannabis sativa HOM05D006650 ORTHO05D008401 1.2e-73 280.8 257 58.4
Cfa008806 Carpinus fangiana HOM05D006650 ORTHO05D008401 2.0e-73 280.0 292 53.8
PGR119G1187 Punica granatum HOM05D006650 ORTHO05D008401 4.5e-73 278.9 216 67.6
MELO3C011665.2 Cucumis melo HOM05D006650 ORTHO05D008401 3.8e-72 275.8 253 58.5
C03p72670 Brassica napus HOM05D006650 ORTHO05D008401 6.6e-72 275.0 316 51.6
Lalb_Chr10g0099501 Lupinus albus HOM05D006650 ORTHO05D008401 6.6e-72 275.0 267 56.9
Potri.008G109700 Populus trichocarpa HOM05D006650 ORTHO05D008401 1.9e-71 273.5 218 67.0
Potri.T046554 Populus trichocarpa HOM05D006650 ORTHO05D008401 1.9e-71 273.5 218 67.0
RcHm_v2.0_Chr4g0436681 Rosa chinensis HOM05D006650 ORTHO05D008401 3.3e-71 272.7 217 65.9
GSVIVG01012028001 Vitis vinifera HOM05D006650 ORTHO05D008401 7.2e-71 271.6 193 72.0
Thecc.02G315100 Theobroma cacao HOM05D006650 ORTHO05D008401 9.5e-71 271.2 238 62.6
FAN07G0603 Fragaria x ananassa HOM05D006650 ORTHO05D008401 1.6e-70 270.4 211 66.8
FAN17G3038 Fragaria x ananassa HOM05D006650 ORTHO05D008401 1.6e-70 270.4 211 66.4
Lsat_1_v5_gn_3_61200 Lactuca sativa HOM05D006650 ORTHO05D008401 3.6e-70 269.2 326 51.2
Os02g0326000 Oryza sativa ssp. japonica HOM05D006650 ORTHO05D008401 3.6e-70 269.2 233 61.8
Sabra08G0083500 Salix brachista HOM05D006650 ORTHO05D008401 2.0e-68 263.5 218 65.1
Gohir.A04G144800 Gossypium hirsutum HOM05D006650 ORTHO05D008401 5.7e-68 261.9 298 53.7
Zm00001eb379060 Zea mays HOM05D006650 ORTHO05D008401 1.3e-67 260.8 270 55.9
Gorai.012G184600 Gossypium raimondii HOM05D006650 ORTHO05D008401 1.7e-67 260.4 239 61.1
TAR371G1079 Trochodendron aralioides HOM05D006650 ORTHO05D008401 2.8e-67 259.6 250 58.8
TAR371G0285 Trochodendron aralioides HOM05D006650 ORTHO05D008401 1.1e-66 257.7 250 58.8
Dinv16555 Davidia involucrata HOM05D006650 ORTHO05D008401 3.2e-66 256.1 175 73.7
SalBow8G0131 Salvia bowleyana HOM05D006650 ORTHO05D008401 4.1e-66 255.8 269 56.9
FAN12G1321 Fragaria x ananassa HOM05D006650 ORTHO05D008401 7.0e-66 255.0 217 64.5
Lj8A100G102 Lonicera japonica HOM05D006650 ORTHO05D008401 1.6e-65 253.8 385 46.8
Gohir.D04G189300 Gossypium hirsutum HOM05D006650 ORTHO05D008401 3.5e-65 252.7 239 60.3
Aa31LG7G8830 Aethionema arabicum HOM05D006650 ORTHO05D008401 8.6e-64 248.1 185 68.6
Sc11g0002870 Simmondsia chinensis HOM05D006650 ORTHO05D008401 7.3e-63 245.0 257 58.0
AagrBONN_evm.TU.Sc2ySwM_228.1783 Anthoceros agrestis HOM05D006650 ORTHO05D008401 9.5e-63 244.6 225 57.3
vmacro10492 Vaccinium macrocarpon HOM05D006650 ORTHO05D008401 1.2e-62 244.2 295 51.5
VMungo1215G2545 Vigna mungo HOM05D006650 ORTHO05D008401 2.1e-62 243.4 244 56.6
CSS0028658 Camellia sinensis var. sinensis HOM05D006650 ORTHO05D008401 1.4e-61 240.7 189 66.7
SGA_v2.0_scaffold16G07854 Striga asiatica HOM05D006650 ORTHO05D008401 2.3e-61 240.0 316 49.7
BraA08t34664Z Brassica rapa HOM05D006650 ORTHO05D008401 3.1e-61 239.6 283 51.6
A08p27180 Brassica napus HOM05D006650 ORTHO05D008401 5.2e-61 238.8 221 60.2
Hma1.2p1_1424F.1_g282730 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 8.9e-61 238.0 289 50.5
FAN22G1912 Fragaria x ananassa HOM05D006650 ORTHO05D008401 1.7e-59 233.8 255 53.3
Hma1.2p1_1459F.1_g284910 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 2.2e-59 233.4 289 49.5
Pp3c15_17200 Physcomitrium patens HOM05D006650 ORTHO05D008401 4.9e-59 232.3 221 53.8
Mapoly0001s0402 Marchantia polymorpha HOM05D006650 ORTHO05D008401 1.4e-58 230.7 221 57.0
SMO239G0062 Selaginella moellendorffii HOM05D006650 ORTHO05D008401 1.4e-58 230.7 199 60.3
FvH4_4g28590 Fragaria vesca HOM05D006650 ORTHO05D008401 3.2e-58 229.6 172 68.0
DCAR_026698 Daucus carota HOM05D006650 ORTHO05D008401 5.4e-58 228.8 243 55.1
Ah.02g127370 Amaranthus hybridus HOM05D006650 ORTHO05D008401 6.0e-57 225.3 201 64.7
Atru.chr11.1474 Acer truncatum HOM05D006650 ORTHO05D008401 7.8e-57 224.9 177 69.5
MD16G1057600 Malus domestica HOM05D006650 ORTHO05D008401 7.5e-52 208.4 165 64.2
AUR62002977 Chenopodium quinoa HOM05D006650 ORTHO05D008401 2.7e-49 199.9 210 57.1
AUR62007783 Chenopodium quinoa HOM05D006650 ORTHO05D008401 6.6e-48 195.3 213 55.9
CDE02G2218 Ceratophyllum demersum HOM05D002187 ORTHO05D002243 9.5e-47 191.4 147 67.3
MBI15_g22709_MAGBIO Magnolia biondii HOM05D006650 ORTHO05D008401 1.1e-45 188.0 136 68.4
CBR_g18672 Chara braunii HOM05D006650 ORTHO05D008401 1.2e-41 174.5 197 46.2
HPP92_021645 Vanilla planifolia HOM05D006650 ORTHO05D008401 1.2e-41 174.5 210 51.0
SalBow8G0120 Salvia bowleyana HOM05D006650 ORTHO05D008401 1.7e-40 170.6 283 44.9
AT1G26180 Arabidopsis thaliana HOM05D006650 ORTHO05D008401 1.1e-39 167.9 199 49.7
EL10Ac6g14586 Beta vulgaris HOM05D006650 ORTHO05D008401 1.6e-38 164.1 237 46.8
CBR_g25761 Chara braunii HOM05D006650 ORTHO05D008401 4.0e-37 159.5 177 48.0
AagrBONN_evm.TU.Sc2ySwM_228.1786 Anthoceros agrestis HOM05D006650 ORTHO05D008401 1.5e-36 157.5 143 57.3
Haze_11820 Corylus avellana HOM05D006650 ORTHO05D008401 1.5e-36 157.5 105 75.2
Nn4g23629 Nelumbo nucifera HOM05D006650 ORTHO05D008401 9.9e-36 154.8 183 51.9
Cpa.g.sc1.261 Carica papaya HOM05D006650 ORTHO05D008401 1.9e-34 150.6 159 53.5
CARHR153660 Cardamine hirsuta HOM05D006650 ORTHO05D008401 6.2e-30 135.6 116 61.2
Cre07.g340150 Chlamydomonas reinhardtii HOM05D006650 ORTHO05D008401 2.4e-26 123.6 187 42.8
Hund05792 Selenicereus undatus HOM05D006650 ORTHO05D008401 5.4e-26 122.5 139 56.1
Peaxi162Scf00004g02825 Petunia axillaris HOM05D006650 ORTHO05D008401 1.9e-23 114.0 70 90.0
MCO03G393 Micromonas commoda HOM05D006650 ORTHO05D008401 9.0e-21 105.1 178 33.7
PRCOL_00002951 Prasinoderma coloniale HOM05D006650 ORTHO05D008401 3.8e-19 99.8 190 35.8
TAR629G1747 Trochodendron aralioides HOM05D006650 ORTHO05D000624 5.1e-16 89.4 79 58.2
Sabra10G0102400 Salix brachista HOM05D006650 ORTHO05D008401 3.4e-12 76.6 93 48.4
Zm00001eb068230 Zea mays HOM05D000001 ORTHO05D000003 2.7e-09 67.0 53 58.5
Eucgr.G02394 Eucalyptus grandis HOM05D006650 ORTHO05D008401 2.1e-06 57.4 42 71.4


User provided reference genes

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