Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen05g006040 Solanum pennellii HOM05D011353 ORTHO05D009802 1.2e-74 283.1 143 100.0
Solyc05g010270.1 Solanum lycopersicum HOM05D011353 ORTHO05D009802 7.7e-74 280.4 143 98.6
PGSC0003DMG400025096 Solanum tuberosum HOM05D011353 ORTHO05D009802 1.8e-70 269.2 145 95.9
CAN.G184.15 Capsicum annuum HOM05D011353 ORTHO05D009802 8.0e-55 217.2 150 80.0
Peaxi162Scf00188g00068 Petunia axillaris HOM05D011353 ORTHO05D009802 8.9e-38 160.6 152 67.1
Nitab4.5_0010998g0060 Nicotiana tabacum HOM05D011353 ORTHO05D009802 4.1e-35 151.8 133 71.4
Nitab4.5_0000027g0500 Nicotiana tabacum HOM05D011353 ORTHO05D009802 4.4e-29 131.7 132 66.7
Nitab4.5_0005310g0050 Nicotiana tabacum HOM05D011353 ORTHO05D014734 9.5e-24 114.0 156 51.3
Oeu024138.1 Olea europaea HOM05D011353 ORTHO05D009956 2.6e-13 79.3 136 45.6
Oeu054579.1 Olea europaea HOM05D011353 ORTHO05D009956 5.8e-13 78.2 135 43.7
Nitab4.5_0000149g0140 Nicotiana tabacum HOM05D011353 ORTHO05D009802 9.9e-13 77.4 113 47.8
Cc11_g11230 Coffea canephora HOM05D011353 ORTHO05D009956 2.2e-12 76.3 132 47.0
Psat4g045520 Pisum sativum HOM05D008563 ORTHO05D009802 7.8e-10 67.8 71 57.7
Gohir.D12G187700 Gossypium hirsutum HOM05D008563 ORTHO05D009802 3.9e-09 65.5 78 52.6
Psat5g232520 Pisum sativum HOM05D008563 ORTHO05D009802 3.9e-09 65.5 80 51.2
TPR.G15318 Trifolium pratense HOM05D008563 ORTHO05D009802 3.9e-09 65.5 87 50.6
Potri.008G113800 Populus trichocarpa HOM05D018804 ORTHO05D013371 8.6e-09 64.3 141 39.0
Duzib084G1352 Durio zibethinus HOM05D008563 ORTHO05D009802 1.1e-08 63.9 141 39.7
Lsat_1_v5_gn_0_39381 Lactuca sativa HOM05D001719 ORTHO05D008373 1.5e-08 63.5 130 40.8
Atru.chr11.1516 Acer truncatum HOM05D018013 ORTHO05D013371 1.9e-08 63.2 139 38.8
Phvul.009G190900 Phaseolus vulgaris HOM05D008563 ORTHO05D009802 2.5e-08 62.8 70 57.1
Manes.02G062300 Manihot esculenta HOM05D008889 ORTHO05D009956 5.6e-08 61.6 70 51.4
Lj1g0007009 Lotus japonicus HOM05D008563 ORTHO05D009802 2.1e-07 59.7 122 40.2
Thecc.03G112200 Theobroma cacao HOM05D008563 ORTHO05D009802 2.8e-07 59.3 143 41.3
CSS0028308 Camellia sinensis var. sinensis HOM05D018052 ORTHO05D009802 3.6e-07 58.9 123 41.5
Lsat_1_v5_gn_4_113140 Lactuca sativa HOM05D038017 ORTHO05D009802 3.6e-07 58.9 70 52.9
Medtr4g112870 Medicago truncatula HOM05D008563 ORTHO05D009802 3.6e-07 58.9 133 39.8
Actinidia30176 Actinidia chinensis HOM05D011353 ORTHO05D009802 6.2e-07 58.2 139 36.7
Oeu048107.1 Olea europaea HOM05D026131 ORTHO05D009956 8.1e-07 57.8 131 40.5
DCAR_011590 Daucus carota HOM05D065511 ORTHO05D009802 1.1e-06 57.4 136 36.0
Potri.004G108840 Populus trichocarpa HOM05D008889 ORTHO05D009956 1.1e-06 57.4 75 48.0
Sabra17G0089900 Salix brachista HOM05D008889 ORTHO05D009956 1.1e-06 57.4 141 39.7
TWI60G1323 Tripterygium wilfordii HOM05D008889 ORTHO05D009956 1.1e-06 57.4 124 41.1
unitig_699.g19509 Utricularia gibba HOM05D014692 ORTHO05D014734 1.4e-06 57.0 103 43.7
BcaC08g45929 Brassica carinata HOM05D008861 ORTHO05D011066 1.8e-06 56.6 136 36.8
C06p37250 Brassica napus HOM05D008861 ORTHO05D011066 1.8e-06 56.6 136 36.8
Gorai.008G201100 Gossypium raimondii HOM05D008563 ORTHO05D009802 1.8e-06 56.6 132 37.9
Manes.01G105700 Manihot esculenta HOM05D008889 ORTHO05D009956 1.8e-06 56.6 117 37.6
BolC6t38828H Brassica oleracea HOM05D008861 ORTHO05D011066 3.1e-06 55.8 136 36.8
Sabra10G0103600 Salix brachista HOM05D018804 ORTHO05D013371 5.2e-06 55.1 153 38.6
Prupe.5G211600 Prunus persica HOM05D008563 ORTHO05D009802 8.9e-06 54.3 75 48.0


User provided reference genes

Program Settings