Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen05g005460 Solanum pennellii HOM05D007842 ORTHO05D009661 1.3e-69 266.2 129 100.0
Solyc05g009650.4 Solanum lycopersicum HOM05D007842 ORTHO05D009661 4.3e-68 261.2 129 97.7
Peaxi162Scf00380g00818 Petunia axillaris HOM05D007842 ORTHO05D009661 3.0e-45 185.3 129 73.6
Nitab4.5_0003642g0020 Nicotiana tabacum HOM05D007842 ORTHO05D009661 3.5e-33 145.2 98 72.4
Hma1.2p1_0030F.1_g018270 Hydrangea macrophylla HOM05D007842 ORTHO05D009661 5.7e-20 101.3 129 47.3
Actinidia14866 Actinidia chinensis HOM05D007842 ORTHO05D009661 5.4e-18 94.7 124 44.4
Dinv21114 Davidia involucrata HOM05D007842 ORTHO05D009661 5.6e-15 84.7 126 42.1
Oeu004600.1 Olea europaea HOM05D007842 ORTHO05D009661 9.5e-15 84.0 133 42.1
Hma1.2p1_0030F.1_g018290 Hydrangea macrophylla HOM05D007842 ORTHO05D009661 2.8e-14 82.4 118 43.2
Actinidia16632 Actinidia chinensis HOM05D007842 ORTHO05D009661 4.7e-14 81.6 122 40.2
QL01p044511 Quercus lobata HOM05D007842 ORTHO05D009661 8.0e-14 80.9 126 42.1
SGA_v2.0_scaffold124G33571 Striga asiatica HOM05D007842 ORTHO05D009661 1.4e-13 80.1 108 43.5
SalBow8G5078 Salvia bowleyana HOM05D007842 ORTHO05D009661 6.8e-13 77.8 123 40.7
SalBow8G3786 Salvia bowleyana HOM05D007842 ORTHO05D009661 8.9e-13 77.4 123 39.8
Actinidia04615 Actinidia chinensis HOM05D007842 ORTHO05D009661 1.5e-12 76.6 125 41.6
DCAR_007231 Daucus carota HOM05D007842 ORTHO05D009661 1.5e-12 76.6 120 40.8
Gohir.A12G169100 Gossypium hirsutum HOM05D007842 ORTHO05D009661 3.4e-12 75.5 121 38.0
Cfa007650 Carpinus fangiana HOM05D007842 ORTHO05D009661 1.7e-11 73.2 119 38.7
CiPaw.04G057000 Carya illinoinensis HOM05D007842 ORTHO05D009661 8.3e-11 70.9 122 41.0
Rhsim09G0110600 Rhododendron simsii HOM05D007842 ORTHO05D009661 1.4e-10 70.1 113 41.6
COL.COLO4_07888 Corchorus olitorius HOM05D007842 ORTHO05D009661 1.9e-10 69.7 121 38.0
Oeu041893.1 Olea europaea HOM05D007842 ORTHO05D009661 3.2e-10 68.9 121 44.6
Gorai.008G184900 Gossypium raimondii HOM05D007842 ORTHO05D009661 7.0e-10 67.8 121 37.2
Actinidia38383 Actinidia chinensis HOM05D007842 ORTHO05D009661 9.2e-10 67.4 122 40.2
Migut.L01087 Erythranthe guttata HOM05D007842 ORTHO05D009661 9.2e-10 67.4 130 36.2
Lsat_1_v5_gn_4_18800 Lactuca sativa HOM05D007842 ORTHO05D009661 9.2e-10 67.4 118 39.0
Potri.009G097500 Populus trichocarpa HOM05D007842 ORTHO05D009661 1.2e-09 67.0 120 34.2
MSTRG.7679 Avicennia marina HOM05D007842 ORTHO05D009661 1.6e-09 66.6 126 41.3
Manes.06G070800 Manihot esculenta HOM05D007842 ORTHO05D009661 2.0e-09 66.2 122 36.9
Lsat_1_v5_gn_4_18760 Lactuca sativa HOM05D007842 ORTHO05D009661 2.7e-09 65.9 121 38.0
CiPaw.03G089900 Carya illinoinensis HOM05D007842 ORTHO05D009661 3.5e-09 65.5 115 36.5
SalBow8G0003 Salvia bowleyana HOM05D007842 ORTHO05D009661 3.5e-09 65.5 124 36.3
Gohir.D12G172400 Gossypium hirsutum HOM05D007842 ORTHO05D009661 4.6e-09 65.1 121 38.0
Oeu044385.1 Olea europaea HOM05D007842 ORTHO05D009661 4.6e-09 65.1 73 43.8
DCAR_023676 Daucus carota HOM05D007842 ORTHO05D009661 1.0e-08 63.9 126 37.3
Glyma.10G276000 Glycine max HOM05D007842 ORTHO05D009661 1.0e-08 63.9 121 34.7
Lj2g0000320 Lotus japonicus HOM05D007842 ORTHO05D009661 1.0e-08 63.9 121 33.1
TWI31G1443 Tripterygium wilfordii HOM05D007842 ORTHO05D009661 1.0e-08 63.9 119 42.0
MSTRG.13511 Avicennia marina HOM05D007842 ORTHO05D009661 1.7e-08 63.2 114 40.4
Thecc.02G358800 Theobroma cacao HOM05D007842 ORTHO05D009661 1.7e-08 63.2 103 36.9
VMungo0720G1629 Vigna mungo HOM05D007842 ORTHO05D009661 2.3e-08 62.8 122 36.9
Glyma.20G113700 Glycine max HOM05D007842 ORTHO05D009661 3.0e-08 62.4 121 33.9
Actinidia13668 Actinidia chinensis HOM05D007842 ORTHO05D009661 3.9e-08 62.0 131 36.6
Sabra10G0097200 Salix brachista HOM05D007842 ORTHO05D009661 3.9e-08 62.0 130 35.4
Phvul.007G025600 Phaseolus vulgaris HOM05D007842 ORTHO05D009661 1.5e-07 60.1 122 36.1
Manes.14G099200 Manihot esculenta HOM05D007842 ORTHO05D009661 1.9e-07 59.7 125 39.2
Lj5g0000394 Lotus japonicus HOM05D007842 ORTHO05D009661 2.5e-07 59.3 127 35.4
Medtr1g111300 Medicago truncatula HOM05D007842 ORTHO05D009661 3.3e-07 58.9 124 32.3
TPR.G26298 Trifolium pratense HOM05D007842 ORTHO05D009661 5.6e-07 58.2 125 36.0
ECA233G2952 Erigeron canadensis HOM05D007842 ORTHO05D009661 7.3e-07 57.8 141 32.6
Potri.010G127900 Populus trichocarpa HOM05D007842 ORTHO05D009661 7.3e-07 57.8 119 35.3
Lsat_1_v5_gn_4_18860 Lactuca sativa HOM05D007842 ORTHO05D009661 3.6e-06 55.5 119 31.1
Atru.chr11.1326 Acer truncatum HOM05D007842 ORTHO05D009661 6.2e-06 54.7 100 36.0


User provided reference genes

Program Settings