Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen05g005220 Solanum pennellii HOM05D000613 ORTHO05D010331 4.6e-97 357.8 174 100.0
PGSC0003DMG400014563 Solanum tuberosum HOM05D000613 ORTHO05D000446 6.6e-11 71.6 114 41.2
Nitab4.5_0003715g0090 Nicotiana tabacum HOM05D000613 ORTHO05D000446 4.7e-09 65.5 89 44.9
Actinidia14899 Actinidia chinensis HOM05D000613 ORTHO05D000446 6.2e-09 65.1 93 44.1
Peaxi162Scf00753g00063 Petunia axillaris HOM05D000613 ORTHO05D000446 8.0e-09 64.7 77 42.9
Sopen05g005210 Solanum pennellii HOM05D000613 ORTHO05D000446 1.1e-08 64.3 114 40.4
Nitab4.5_0005746g0020 Nicotiana tabacum HOM05D000613 ORTHO05D000446 1.4e-08 63.9 89 44.9
PGSC0003DMG400006008 Solanum tuberosum HOM05D000613 ORTHO05D000446 1.4e-08 63.9 94 39.4
Nitab4.5_0005123g0030 Nicotiana tabacum HOM05D000613 ORTHO05D000446 1.8e-08 63.5 126 35.7
Solyc04g007240.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 1.8e-08 63.5 92 39.1
Solyc05g009410.3 Solanum lycopersicum HOM05D000613 ORTHO05D000446 1.8e-08 63.5 114 39.5
Sed0014015 Sechium edule HOM05D000613 ORTHO05D000446 2.3e-08 63.2 67 46.3
Sopen04g002300 Solanum pennellii HOM05D000613 ORTHO05D000446 2.3e-08 63.2 92 39.1
Nitab4.5_0000057g0220 Nicotiana tabacum HOM05D000613 ORTHO05D000446 4.0e-08 62.4 88 40.9
Rhsim09G0107100 Rhododendron simsii HOM05D000613 ORTHO05D000446 1.5e-07 60.5 84 41.7
HanXRQChr17g0552331 Helianthus annuus HOM05D000613 ORTHO05D000446 2.0e-07 60.1 77 42.9
MD13G1040600 Malus domestica HOM05D000613 ORTHO05D000446 2.0e-07 60.1 84 41.7
EL10Ac6g14387 Beta vulgaris HOM05D000613 ORTHO05D000446 2.6e-07 59.7 63 49.2
Ah.03g137550 Amaranthus hybridus HOM05D000613 ORTHO05D000446 3.4e-07 59.3 75 45.3
Lalb_Chr21g0308881 Lupinus albus HOM05D000613 ORTHO05D000446 3.4e-07 59.3 93 39.8
MD16G1041700 Malus domestica HOM05D000613 ORTHO05D000446 3.4e-07 59.3 84 41.7
Prupe.1G312400 Prunus persica HOM05D000613 ORTHO05D000446 3.4e-07 59.3 77 44.2
CSS0006991 Camellia sinensis var. sinensis HOM05D000613 ORTHO05D000446 4.4e-07 58.9 96 41.7
Dinv21075 Davidia involucrata HOM05D000613 ORTHO05D000446 4.4e-07 58.9 84 41.7
MELO3C011541.2 Cucumis melo HOM05D000613 ORTHO05D000446 5.8e-07 58.5 76 43.4
Sed0020256 Sechium edule HOM05D000613 ORTHO05D000446 5.8e-07 58.5 66 43.9
CAN.G609.10 Capsicum annuum HOM05D000613 ORTHO05D000446 7.5e-07 58.2 63 46.0
Peaxi162Scf00106g00224 Petunia axillaris HOM05D000613 ORTHO05D000446 7.5e-07 58.2 79 41.8
SHI26280 Sapria himalayana HOM05D000613 ORTHO05D000446 7.5e-07 58.2 77 40.3
Sp5g23530 Schrenkiella parvula HOM05D000613 ORTHO05D000446 7.5e-07 58.2 97 41.2
CsaV3_6G003310 Cucumis sativus L. HOM05D000613 ORTHO05D000446 9.8e-07 57.8 76 42.1
Dinv31632 Davidia involucrata HOM05D000613 ORTHO05D000446 1.3e-06 57.4 84 40.5
Lsat_1_v5_gn_3_58960 Lactuca sativa HOM05D000613 ORTHO05D000446 1.3e-06 57.4 79 40.5
Solyc08g067650.2 Solanum lycopersicum HOM05D007931 ORTHO05D010331 1.3e-06 57.4 33 75.8
Solyc09g064910.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 1.3e-06 57.4 64 46.9
PGSC0003DMG400046681 Solanum tuberosum HOM05D000613 ORTHO05D000446 1.3e-06 57.4 103 32.0
TAR629G0918 Trochodendron aralioides HOM05D000613 ORTHO05D000446 1.3e-06 57.4 75 44.0
CAN.G610.74 Capsicum annuum HOM05D000613 ORTHO05D000446 1.7e-06 57.0 89 37.1
Sed0005172 Sechium edule HOM05D000613 ORTHO05D000446 1.7e-06 57.0 77 36.4
Sopen09g026610 Solanum pennellii HOM05D000613 ORTHO05D000446 1.7e-06 57.0 64 46.9
PGSC0003DMG400000957 Solanum tuberosum HOM05D000613 ORTHO05D000446 1.7e-06 57.0 64 46.9
SGA_v2.0_scaffold5409G54639 Striga asiatica HOM05D000613 ORTHO05D000446 1.7e-06 57.0 148 29.7
EL10Ac7g17219 Beta vulgaris HOM05D000613 ORTHO05D000446 2.2e-06 56.6 62 43.5
CSS0040585 Camellia sinensis var. sinensis HOM05D000613 ORTHO05D000446 2.2e-06 56.6 84 41.7
Lj5g0001355 Lotus japonicus HOM05D000613 ORTHO05D000446 2.2e-06 56.6 87 37.9
Oeu010297.1 Olea europaea HOM05D000613 ORTHO05D000446 2.2e-06 56.6 101 30.7
ECA248G0389 Erigeron canadensis HOM05D000613 ORTHO05D000446 2.9e-06 56.2 74 40.5
Lalb_Chr02g0145901 Lupinus albus HOM05D000613 ORTHO05D000446 2.9e-06 56.2 97 39.2
Medtr7g407170 Medicago truncatula HOM05D000613 ORTHO05D000446 2.9e-06 56.2 72 41.7
Nn4g26190 Nelumbo nucifera HOM05D000613 ORTHO05D000446 2.9e-06 56.2 80 35.0
PGSC0003DMG400038521 Solanum tuberosum HOM05D000613 ORTHO05D000446 2.9e-06 56.2 105 32.4
TWI79G0254 Tripterygium wilfordii HOM05D000613 ORTHO05D000446 2.9e-06 56.2 103 36.9
Medtr1g110590 Medicago truncatula HOM05D000613 ORTHO05D000446 3.7e-06 55.8 91 40.7
TWI31G1186 Tripterygium wilfordii HOM05D000613 ORTHO05D000446 3.7e-06 55.8 112 35.7
ClCG05G022650 Citrullus lanatus HOM05D000613 ORTHO05D000446 4.9e-06 55.5 87 41.4
ECA234G4079 Erigeron canadensis HOM05D000613 ORTHO05D000446 4.9e-06 55.5 85 42.4
Oeu037680.1 Olea europaea HOM05D000613 ORTHO05D000446 4.9e-06 55.5 71 36.6
PGR083G0907 Punica granatum HOM05D000613 ORTHO05D000446 4.9e-06 55.5 79 36.7
PGSC0003DMG400037106 Solanum tuberosum HOM05D000613 ORTHO05D000446 4.9e-06 55.5 103 32.0
EL10Ac3g06345 Beta vulgaris HOM05D000613 ORTHO05D000446 6.4e-06 55.1 85 35.3
ClCG08G005030 Citrullus lanatus HOM05D000613 ORTHO05D000446 6.4e-06 55.1 76 39.5
MELO3C012255.2 Cucumis melo HOM05D000613 ORTHO05D000446 6.4e-06 55.1 88 39.8
CsaV3_3G013770 Cucumis sativus L. HOM05D000613 ORTHO05D000446 6.4e-06 55.1 74 35.1
GSVIVG01011886001 Vitis vinifera HOM05D000613 ORTHO05D000446 6.4e-06 55.1 74 41.9
AUR62035204 Chenopodium quinoa HOM05D000613 ORTHO05D000446 8.3e-06 54.7 75 40.0
Ciclev10015747m.g Citrus clementina HOM05D000613 ORTHO05D000446 8.3e-06 54.7 88 39.8
DCAR_018410 Daucus carota HOM05D000613 ORTHO05D000446 8.3e-06 54.7 63 41.3
Migut.E00350 Erythranthe guttata HOM05D000613 ORTHO05D000446 8.3e-06 54.7 99 38.4
Lsat_1_v5_gn_9_4220 Lactuca sativa HOM05D000613 ORTHO05D000446 8.3e-06 54.7 64 43.8
MBI09_g18089_MAGBIO Magnolia biondii HOM05D000613 ORTHO05D000446 8.3e-06 54.7 100 36.0
Medtr2g075100 Medicago truncatula HOM05D000613 ORTHO05D000446 8.3e-06 54.7 65 40.0
Psat6g226640 Pisum sativum HOM05D000613 ORTHO05D000446 8.3e-06 54.7 89 39.3
Sabra08G0092300 Salix brachista HOM05D000613 ORTHO05D000446 8.3e-06 54.7 75 40.0


User provided reference genes

Program Settings