Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen05g004110 Solanum pennellii HOM05D007719 ORTHO05D009782 1.3e-238 829.3 414 100.0
Solyc05g008270.3 Solanum lycopersicum HOM05D007719 ORTHO05D009782 4.7e-233 810.8 414 98.1
PGSC0003DMG400030550 Solanum tuberosum HOM05D007719 ORTHO05D009782 1.3e-227 792.7 425 94.1
CAN.G1334.8 Capsicum annuum HOM05D007719 ORTHO05D009782 4.0e-216 754.6 414 90.6
Nitab4.5_0004776g0060 Nicotiana tabacum HOM05D007719 ORTHO05D009782 7.1e-189 664.1 351 93.2
Peaxi162Scf00205g00122 Petunia axillaris HOM05D007719 ORTHO05D009782 2.5e-186 655.6 413 82.8
Dinv05161 Davidia involucrata HOM05D007719 ORTHO05D009782 5.7e-178 627.9 395 80.0
QL01p001957 Quercus lobata HOM05D007719 ORTHO05D009782 2.0e-170 602.8 390 78.5
CSS0046068 Camellia sinensis var. sinensis HOM05D007719 ORTHO05D009782 2.4e-168 595.9 390 76.2
ECA234G0976 Erigeron canadensis HOM05D007719 ORTHO05D009782 9.1e-168 594.0 396 74.0
FAN12G3181 Fragaria x ananassa HOM05D007719 ORTHO05D009782 1.5e-167 593.2 369 78.0
vmacro10633 Vaccinium macrocarpon HOM05D007719 ORTHO05D009782 5.9e-167 591.3 385 76.1
Lalb_Chr17g0338681 Lupinus albus HOM05D007719 ORTHO05D009782 1.7e-166 589.7 400 74.0
Potri.010G114100 Populus trichocarpa HOM05D007719 ORTHO05D009782 2.2e-166 589.3 394 75.4
FvH4_4g32280 Fragaria vesca HOM05D007719 ORTHO05D009782 3.8e-166 588.6 367 77.9
Gorai.008G166400 Gossypium raimondii HOM05D007719 ORTHO05D009782 8.5e-166 587.4 372 78.0
Actinidia36679 Actinidia chinensis HOM05D007719 ORTHO05D009782 1.1e-165 587.0 388 76.3
FAN07G1524 Fragaria x ananassa HOM05D007719 ORTHO05D009782 4.2e-165 585.1 362 78.5
Gohir.A12G150300 Gossypium hirsutum HOM05D007719 ORTHO05D009782 1.2e-164 583.6 372 77.7
Oeu034423.3 Olea europaea HOM05D007719 ORTHO05D009782 1.2e-164 583.6 441 69.8
MSTRG.23215 Avicennia marina HOM05D007719 ORTHO05D009782 2.1e-164 582.8 405 73.8
PGR119G0428 Punica granatum HOM05D007719 ORTHO05D009782 2.7e-164 582.4 394 74.6
MD16G1029600 Malus domestica HOM05D007719 ORTHO05D009782 6.1e-164 581.3 391 75.2
Lsat_1_v5_gn_4_14941 Lactuca sativa HOM05D007719 ORTHO05D009782 7.9e-164 580.9 376 75.0
HanXRQChr17g0566951 Helianthus annuus HOM05D007719 ORTHO05D009782 1.0e-163 580.5 387 73.4
FAN22G2057 Fragaria x ananassa HOM05D007719 ORTHO05D009782 1.8e-163 579.7 378 75.4
Atru.chr11.428 Acer truncatum HOM05D007719 ORTHO05D009782 2.3e-163 579.3 359 78.8
Rhsim09G0099000 Rhododendron simsii HOM05D007719 ORTHO05D009782 2.3e-163 579.3 414 71.5
RcHm_v2.0_Chr4g0441071 Rosa chinensis HOM05D007719 ORTHO05D009782 5.1e-163 578.2 381 74.5
TAR629G1042 Trochodendron aralioides HOM05D007719 ORTHO05D009782 6.7e-163 577.8 389 74.0
CiPaw.05G248600 Carya illinoinensis HOM05D007719 ORTHO05D009782 1.1e-162 577.0 392 75.5
ClCG01G006100 Citrullus lanatus HOM05D007719 ORTHO05D009782 5.7e-162 574.7 392 73.5
Cc11_g08840 Coffea canephora HOM05D007719 ORTHO05D009782 9.7e-162 573.9 411 72.3
SalBow5G1767 Salvia bowleyana HOM05D007719 ORTHO05D009782 1.3e-161 573.5 406 73.6
TPR.G36961 Trifolium pratense HOM05D007719 ORTHO05D009782 1.7e-161 573.2 405 70.6
Glyma.09G119300 Glycine max HOM05D007719 ORTHO05D009782 3.7e-161 572.0 382 75.4
Medtr1g030640 Medicago truncatula HOM05D007719 ORTHO05D009782 3.7e-161 572.0 385 73.5
Lj2g0007830 Lotus japonicus HOM05D007719 ORTHO05D009782 1.1e-160 570.5 365 77.8
COL.COLO4_20469 Corchorus olitorius HOM05D007719 ORTHO05D009782 2.4e-160 569.3 396 73.2
EL10Ac3g06304 Beta vulgaris HOM05D007719 ORTHO05D009782 9.1e-160 567.4 374 75.9
FAN17G2178 Fragaria x ananassa HOM05D007719 ORTHO05D009782 9.1e-160 567.4 355 77.5
DCAR_030215 Daucus carota HOM05D007719 ORTHO05D009782 1.2e-159 567.0 354 79.9
TWI75G0056 Tripterygium wilfordii HOM05D007719 ORTHO05D009782 1.6e-159 566.6 386 73.6
Sed0008286 Sechium edule HOM05D007719 ORTHO05D009782 4.5e-159 565.1 376 74.7
CsaV3_5G028560 Cucumis sativus L. HOM05D007719 ORTHO05D009782 5.9e-159 564.7 408 70.3
VMungo1215G2618 Vigna mungo HOM05D007719 ORTHO05D009782 7.7e-159 564.3 381 74.8
Psat0s3407g0080 Pisum sativum HOM05D007719 ORTHO05D009782 2.9e-158 562.4 391 72.6
Hund24987 Selenicereus undatus HOM05D007719 ORTHO05D009782 2.9e-158 562.4 377 74.3
Manes.15G114900 Manihot esculenta HOM05D007719 ORTHO05D009782 5.0e-158 561.6 360 76.1
AUR62002606 Chenopodium quinoa HOM05D007719 ORTHO05D009782 2.5e-157 559.3 381 72.7
AUR62030024 Chenopodium quinoa HOM05D007719 ORTHO05D009782 3.2e-157 558.9 370 74.3
Ca_25710_v3 Cicer arietinum L. HOM05D007719 ORTHO05D009782 7.2e-157 557.8 385 73.8
arahy.Tifrunner.gnm1.ann1.Y8VIVB Arachis hypogaea HOM05D007719 ORTHO05D009782 9.4e-157 557.4 368 75.0
Eucgr.G02196 Eucalyptus grandis HOM05D007719 ORTHO05D009782 1.6e-156 556.6 393 71.2
SGA_v2.0_scaffold25G10737 Striga asiatica HOM05D007719 ORTHO05D009782 3.0e-155 552.4 432 69.2
Sc11g0004120 Simmondsia chinensis HOM05D007719 ORTHO05D009782 4.0e-155 552.0 395 71.9
Ah.07g204110 Amaranthus hybridus HOM05D007719 ORTHO05D009782 8.8e-155 550.8 400 70.5
Phvul.003G022800 Phaseolus vulgaris HOM05D007719 ORTHO05D009782 1.5e-154 550.1 375 74.4
Sabra10G0084100 Salix brachista HOM05D007719 ORTHO05D009782 8.2e-153 544.3 407 68.3
HPP92_021852 Vanilla planifolia HOM05D007719 ORTHO05D009782 2.4e-152 542.7 395 68.4
ATR0686G226 Amborella trichopoda HOM05D007719 ORTHO05D009782 7.0e-152 541.2 352 75.6
Migut.O00274 Erythranthe guttata HOM05D007719 ORTHO05D009782 2.7e-151 539.3 390 71.8
unitig_61.g26194 Utricularia gibba HOM05D007719 ORTHO05D009782 5.5e-149 531.6 359 75.2
Os01g0127400 Oryza sativa ssp. japonica HOM05D007719 ORTHO05D009782 4.0e-147 525.4 376 69.4
SEGI_18275 Sequoiadendron giganteum HOM05D007719 ORTHO05D009782 2.2e-145 519.6 389 66.8
arahy.Tifrunner.gnm1.ann1.L198GP Arachis hypogaea HOM05D007719 ORTHO05D009782 6.3e-145 518.1 368 71.5
Mapoly0070s0076 Marchantia polymorpha HOM05D007719 ORTHO05D009782 3.5e-143 512.3 350 70.0
Prupe.1G323300 Prunus persica HOM05D007719 ORTHO05D009782 2.9e-142 509.2 327 76.8
Pp3c1_3200 Physcomitrium patens HOM05D007719 ORTHO05D009782 2.6e-138 496.1 351 67.0
SMO236G0033 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 2.1e-132 476.5 361 64.8
SMO236G0110 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 2.1e-132 476.5 361 64.8
MELO3C005317.2 Cucumis melo HOM05D007719 ORTHO05D009782 5.2e-131 471.9 403 62.5
CDE04G3405 Ceratophyllum demersum HOM05D007719 ORTHO05D009782 4.9e-129 465.3 380 65.5
Actinidia15254 Actinidia chinensis HOM05D007719 ORTHO05D009782 5.4e-128 461.8 383 65.3
GSVIVG01011772001 Vitis vinifera HOM05D007719 ORTHO05D009782 2.0e-122 443.4 300 75.3
Zm00001eb125300 Zea mays HOM05D007719 ORTHO05D009782 4.3e-117 425.6 352 60.8
SMO187G0003 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 2.8e-108 396.4 361 56.2
Thecc.02G280000 Theobroma cacao HOM05D007719 ORTHO05D009782 5.2e-107 392.1 276 72.8
Gohir.D12G153900 Gossypium hirsutum HOM05D007719 ORTHO05D009782 2.0e-106 390.2 235 80.9
Cpa.g.sc65.124 Carica papaya HOM05D007719 ORTHO05D009782 1.3e-102 377.5 270 72.6
Haze_11019 Corylus avellana HOM05D007719 ORTHO05D009782 3.2e-96 356.3 299 65.2
AagrBONN_evm.TU.Sc2ySwM_228.3777 Anthoceros agrestis HOM05D007719 ORTHO05D009782 6.4e-89 332.0 273 61.5
Cfa008596 Carpinus fangiana HOM05D007719 ORTHO05D009782 3.9e-86 322.8 234 71.4
SEGI_23314 Sequoiadendron giganteum HOM05D007719 ORTHO05D009782 4.5e-82 309.3 238 65.1
CBR_g12440 Chara braunii HOM05D007719 ORTHO05D009782 2.1e-76 290.4 362 45.6
Nn4g24120 Nelumbo nucifera HOM05D007719 ORTHO05D009782 5.3e-75 285.8 174 78.2
Duzib268G0649 Durio zibethinus HOM05D007719 ORTHO05D009782 6.9e-67 258.8 205 65.4
GSVIVG01011775001 Vitis vinifera HOM05D007719 ORTHO05D009782 5.9e-58 229.2 145 78.6
Cfa008597 Carpinus fangiana HOM05D007719 ORTHO05D009782 5.5e-48 196.1 139 72.7
Haze_11018 Corylus avellana HOM05D007719 ORTHO05D009782 7.2e-48 195.7 137 74.5
TPR.G29132 Trifolium pratense HOM05D007719 ORTHO05D009782 2.5e-08 64.3 75 49.3


User provided reference genes

Program Settings