Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen05g003560 Solanum pennellii HOM05D006399 ORTHO05D007988 8.2e-268 926.4 440 100.0
Solyc05g007680.1 Solanum lycopersicum HOM05D006399 ORTHO05D007988 3.6e-263 911.0 440 98.4
PGSC0003DMG400018440 Solanum tuberosum HOM05D006399 ORTHO05D007988 4.8e-252 874.0 443 93.5
Nitab4.5_0000145g0020 Nicotiana tabacum HOM05D006399 ORTHO05D007988 8.6e-201 703.7 465 75.5
CAN.G1335.8 Capsicum annuum HOM05D006399 ORTHO05D007988 7.3e-200 700.7 446 77.8
Peaxi162Scf00222g00816 Petunia axillaris HOM05D006399 ORTHO05D007988 2.2e-188 662.5 448 74.1
Nitab4.5_0004661g0030 Nicotiana tabacum HOM05D006399 ORTHO05D007988 3.3e-184 648.7 397 79.3
Cc00_g16610 Coffea canephora HOM05D006399 ORTHO05D007988 8.2e-159 564.3 472 59.7
Oeu005762.1 Olea europaea HOM05D006399 ORTHO05D007988 1.2e-154 550.4 478 59.8
CSS0033869 Camellia sinensis var. sinensis HOM05D006399 ORTHO05D007988 5.7e-152 541.6 425 63.5
Dinv34129 Davidia involucrata HOM05D006399 ORTHO05D007988 1.4e-150 537.0 432 61.8
TAR622G1196 Trochodendron aralioides HOM05D006399 ORTHO05D007988 1.6e-146 523.5 471 56.9
Actinidia17748 Actinidia chinensis HOM05D006399 ORTHO05D007988 2.7e-146 522.7 431 60.3
Rhsim12G0079500 Rhododendron simsii HOM05D006399 ORTHO05D007988 1.4e-145 520.4 476 57.6
Gorai.013G088500 Gossypium raimondii HOM05D006399 ORTHO05D007988 8.8e-145 517.7 469 57.4
DCAR_007171 Daucus carota HOM05D006399 ORTHO05D007988 3.3e-144 515.8 429 61.1
Actinidia31971 Actinidia chinensis HOM05D006399 ORTHO05D007988 2.8e-143 512.7 471 57.3
Gohir.D13G077400 Gossypium hirsutum HOM05D006399 ORTHO05D007988 1.8e-142 510.0 463 56.6
Cpa.g.sc1.57 Carica papaya HOM05D006399 ORTHO05D007988 5.3e-142 508.4 477 56.4
FAN07G1460 Fragaria x ananassa HOM05D006399 ORTHO05D007988 5.9e-141 505.0 468 56.6
Potri.008G089800 Populus trichocarpa HOM05D006399 ORTHO05D007988 2.2e-140 503.1 473 55.6
Haze_11970 Corylus avellana HOM05D006399 ORTHO05D007988 1.1e-139 500.7 490 55.3
Thecc.02G341500 Theobroma cacao HOM05D006399 ORTHO05D007988 1.1e-139 500.7 458 57.2
Lj3C1034G10 Lonicera japonica HOM05D006399 ORTHO05D007988 5.5e-139 498.4 365 66.3
Aqoxy3G00634 Aquilegia oxysepala HOM05D006399 ORTHO05D007988 7.2e-139 498.0 471 55.2
FvH4_4g30980 Fragaria vesca HOM05D006399 ORTHO05D007988 9.4e-139 497.7 462 56.7
PGR102G0590 Punica granatum HOM05D006399 ORTHO05D007988 1.6e-138 496.9 409 60.4
RcHm_v2.0_Chr4g0439341 Rosa chinensis HOM05D006399 ORTHO05D007988 2.1e-138 496.5 471 54.6
HanXRQChr15g0476901 Helianthus annuus HOM05D006399 ORTHO05D007988 3.6e-138 495.7 454 57.7
Manes.05G105200 Manihot esculenta HOM05D006399 ORTHO05D007988 8.0e-138 494.6 429 57.8
Eucgr.B03205 Eucalyptus grandis HOM05D006399 ORTHO05D007988 1.0e-137 494.2 465 55.1
FAN12G0639 Fragaria x ananassa HOM05D006399 ORTHO05D007988 1.0e-137 494.2 469 55.7
Sabra08G0067200 Salix brachista HOM05D006399 ORTHO05D007988 1.4e-137 493.8 493 52.9
Prupe.1G278300 Prunus persica HOM05D006399 ORTHO05D007988 1.8e-137 493.4 423 58.2
unitig_699.g19915 Utricularia gibba HOM05D006399 ORTHO05D007988 1.8e-137 493.4 456 55.0
CiPaw.05G130700 Carya illinoinensis HOM05D006399 ORTHO05D007988 2.3e-137 493.0 477 54.1
Cfa008944 Carpinus fangiana HOM05D006399 ORTHO05D007988 3.9e-137 492.3 494 53.6
Lalb_Chr04g0255911 Lupinus albus HOM05D006399 ORTHO05D007988 6.7e-137 491.5 422 57.6
MD16G1068900 Malus domestica HOM05D006399 ORTHO05D007988 6.7e-137 491.5 383 62.7
Atru.chr11.1740 Acer truncatum HOM05D006399 ORTHO05D007988 1.5e-136 490.3 393 61.3
Duzib248G1019 Durio zibethinus HOM05D006399 ORTHO05D007988 3.3e-136 489.2 467 54.2
Migut.L01261 Erythranthe guttata HOM05D006399 ORTHO05D007988 4.4e-136 488.8 444 58.1
CANSAT64G0537 Cannabis sativa HOM05D006399 ORTHO05D007988 2.8e-135 486.1 477 54.9
Lsat_1_v5_gn_3_51980 Lactuca sativa HOM05D006399 ORTHO05D007988 2.8e-135 486.1 377 62.6
PSO210G1214 Papaver somniferum HOM05D006399 ORTHO05D007988 3.7e-135 485.7 417 58.5
ECA246G3166 Erigeron canadensis HOM05D006399 ORTHO05D007988 2.0e-133 479.9 371 63.3
Nn3g17286 Nelumbo nucifera HOM05D006399 ORTHO05D007988 1.0e-132 477.6 418 56.5
Nn3g17302 Nelumbo nucifera HOM05D006399 ORTHO05D007988 1.0e-132 477.6 418 56.5
CSS0044828 Camellia sinensis var. sinensis HOM05D006399 ORTHO05D007988 1.7e-132 476.9 430 55.3
Glyma.02G110300 Glycine max HOM05D006399 ORTHO05D007988 5.0e-132 475.3 444 56.1
Phvul.003G046500 Phaseolus vulgaris HOM05D006399 ORTHO05D007988 9.4e-131 471.1 386 59.8
GSVIVG01005154001 Vitis vinifera HOM05D006399 ORTHO05D007988 9.4e-131 471.1 418 56.5
Carub.0001s2425 Capsella rubella HOM05D006399 ORTHO05D007988 1.2e-130 470.7 383 59.0
Glyma.01G052300 Glycine max HOM05D006399 ORTHO05D007988 1.6e-130 470.3 392 58.7
Ca_04827_v3 Cicer arietinum L. HOM05D006399 ORTHO05D007988 3.6e-130 469.2 372 61.3
Psat2g116280 Pisum sativum HOM05D006399 ORTHO05D007988 3.6e-130 469.2 377 60.5
VMungo1215G0113 Vigna mungo HOM05D006399 ORTHO05D007988 3.6e-130 469.2 387 60.2
Dinv07949 Davidia involucrata HOM05D006399 ORTHO05D007988 4.7e-130 468.8 411 57.9
Dinv34130 Davidia involucrata HOM05D006399 ORTHO05D007988 8.0e-130 468.0 411 57.9
AL1G38940 Arabidopsis lyrata HOM05D006399 ORTHO05D007988 1.4e-129 467.2 408 56.4
Cfa008945 Carpinus fangiana HOM05D006399 ORTHO05D007988 1.4e-129 467.2 429 54.5
AT1G26761 Arabidopsis thaliana HOM05D006399 ORTHO05D007988 1.8e-129 466.8 394 58.4
Medtr5g042100 Medicago truncatula HOM05D006399 ORTHO05D007988 5.2e-129 465.3 373 60.9
Lj2g0004295 Lotus japonicus HOM05D006399 ORTHO05D007988 1.2e-128 464.2 437 55.1
THA.LOC104808694 Tarenaya hassleriana HOM05D006399 ORTHO05D007988 1.7e-127 460.3 464 54.5
Aa31LG7G8360 Aethionema arabicum HOM05D006399 ORTHO05D007988 2.8e-127 459.5 378 59.3
TPR.G34705 Trifolium pratense HOM05D006399 ORTHO05D007988 2.8e-127 459.5 441 54.0
Ah.02g129470 Amaranthus hybridus HOM05D006399 ORTHO05D007988 3.7e-127 459.1 408 55.6
Thhalv10007591m.g Eutrema salsugineum HOM05D006399 ORTHO05D007988 8.3e-127 458.0 467 51.2
Sp1g22040 Schrenkiella parvula HOM05D006399 ORTHO05D007988 8.3e-127 458.0 443 52.4
Haze_11971 Corylus avellana HOM05D006399 ORTHO05D007988 1.1e-126 457.6 430 54.0
QL93p1999_0143 Quercus lobata HOM05D006399 ORTHO05D007988 1.4e-126 457.2 427 54.6
BraA09t39516Z Brassica rapa HOM05D006399 ORTHO05D007988 1.8e-126 456.8 384 57.6
EL10Ac6g13248 Beta vulgaris HOM05D006399 ORTHO05D007988 3.1e-126 456.1 431 55.9
BcaC05g26389 Brassica carinata HOM05D006399 ORTHO05D007988 5.3e-126 455.3 424 52.8
C05p24200 Brassica napus HOM05D006399 ORTHO05D007988 5.3e-126 455.3 424 52.8
BolC5t31156H Brassica oleracea HOM05D006399 ORTHO05D007988 5.3e-126 455.3 424 52.8
QL03p069077 Quercus lobata HOM05D006399 ORTHO05D007988 5.3e-126 455.3 427 54.1
AUR62005827 Chenopodium quinoa HOM05D006399 ORTHO05D007988 7.0e-126 454.9 450 53.3
ATR0564G327 Amborella trichopoda HOM05D006399 ORTHO05D007988 1.6e-125 453.8 368 60.1
Atru.chr11.1742 Acer truncatum HOM05D006399 ORTHO05D007988 2.7e-125 453.0 429 55.2
CiPaw.06G087600 Carya illinoinensis HOM05D006399 ORTHO05D007988 5.9e-125 451.8 429 54.1
QL12p039367 Quercus lobata HOM05D006399 ORTHO05D007988 1.3e-124 450.7 424 53.8
RcHm_v2.0_Chr4g0439361 Rosa chinensis HOM05D006399 ORTHO05D007988 2.2e-124 449.9 459 51.4
A09p40180 Brassica napus HOM05D006399 ORTHO05D007988 8.5e-124 448.0 426 53.3
Eucgr.G02484 Eucalyptus grandis HOM05D006399 ORTHO05D007988 2.5e-123 446.4 427 54.1
FAN07G2088 Fragaria x ananassa HOM05D006399 ORTHO05D007988 1.2e-122 444.1 454 51.8
FvH4_4g30990 Fragaria vesca HOM05D006399 ORTHO05D007988 3.6e-122 442.6 454 51.5
FAN22G0994 Fragaria x ananassa HOM05D006399 ORTHO05D007988 6.1e-122 441.8 420 53.6
FAN12G2051 Fragaria x ananassa HOM05D006399 ORTHO05D007988 4.0e-121 439.1 454 51.3
Manes.01G033900 Manihot esculenta HOM05D006399 ORTHO05D007988 6.8e-121 438.3 421 53.9
QL12p039232 Quercus lobata HOM05D006399 ORTHO05D007988 2.0e-120 436.8 433 52.4
CARHR025180 Cardamine hirsuta HOM05D006399 ORTHO05D007988 4.4e-120 435.6 438 51.6
PGR102G2002 Punica granatum HOM05D006399 ORTHO05D007988 6.3e-119 431.8 384 55.5
CDE06G2322 Ceratophyllum demersum HOM05D006399 ORTHO05D007988 7.0e-118 428.3 440 51.4
SEGI_38638 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 1.2e-117 427.6 374 53.2
GSVIVG01005153001 Vitis vinifera HOM05D006399 ORTHO05D007988 1.1e-110 404.4 362 55.2
CiPaw.05G130800 Carya illinoinensis HOM05D006399 ORTHO05D007988 4.3e-107 392.5 410 49.5
Pp3c5_14870 Physcomitrium patens HOM05D006399 ORTHO05D007988 7.0e-102 375.2 423 45.6
MSTRG.719 Avicennia marina HOM05D006399 ORTHO05D007988 1.9e-86 323.9 328 54.6
FAN22G2397 Fragaria x ananassa HOM05D006399 ORTHO05D007988 2.6e-80 303.5 452 42.9
SalBow2G2517 Salvia bowleyana HOM05D006399 ORTHO05D007988 3.4e-80 303.1 212 68.4
Zm00001eb041520 Zea mays HOM05D006399 ORTHO05D007988 1.3e-79 301.2 336 46.7
Os08g0433300 Oryza sativa ssp. japonica HOM05D006399 ORTHO05D007988 2.2e-79 300.4 351 46.2
MBI05_g36409_MAGBIO Magnolia biondii HOM05D006399 ORTHO05D007988 2.3e-76 290.4 299 52.2
AUR62032821 Chenopodium quinoa HOM05D006399 ORTHO05D007988 6.6e-76 288.9 249 58.6
Cre06.g273050 Chlamydomonas reinhardtii HOM05D006399 ORTHO05D007988 9.0e-65 251.9 388 37.6
Ciclev10032022m.g Citrus clementina HOM05D006399 ORTHO05D007988 1.1e-57 228.4 472 33.7
PRCOL_00004009 Prasinoderma coloniale HOM05D006399 ORTHO05D007988 4.2e-54 216.5 391 35.5
Lj7C251T2 Lonicera japonica HOM05D006399 ORTHO05D007988 6.2e-50 202.6 299 40.1
COL.COLO4_27992 Corchorus olitorius HOM05D006399 ORTHO05D007988 1.5e-40 171.4 199 51.3
Pp3c9_20180 Physcomitrium patens HOM05D006399 ORTHO05D007988 8.2e-34 149.1 378 33.6
Lj7P254T18 Lonicera japonica HOM05D006399 ORTHO05D007988 1.3e-31 141.7 112 62.5
TWI75G1459 Tripterygium wilfordii HOM05D006399 ORTHO05D007988 7.2e-30 136.0 170 47.1
Pp3c11_9510 Physcomitrium patens HOM05D006399 ORTHO05D007988 2.3e-28 131.0 379 29.8
SEGI_31378 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 3.9e-28 130.2 362 31.2
SEGI_07124 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 4.1e-25 120.2 321 32.7
CDE02G1760 Ceratophyllum demersum HOM05D006399 ORTHO05D007988 1.3e-23 115.2 131 45.0
Pp3c2_5840 Physcomitrium patens HOM05D006399 ORTHO05D007988 1.1e-22 112.1 261 35.2
Hma1.2p1_0235F.1_g098770 Hydrangea macrophylla HOM05D006399 ORTHO05D007988 1.8e-20 104.8 53 83.0
SGA_v2.0_scaffold109G31082 Striga asiatica HOM05D006399 ORTHO05D007988 1.9e-06 58.2 41 58.5


User provided reference genes

Program Settings