Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen05g003500 Solanum pennellii HOM05D000011 ORTHO05D010520 6.9e-78 293.9 148 100.0
Solyc05g007640.3 Solanum lycopersicum HOM05D000011 ORTHO05D000018 8.2e-63 243.8 137 89.1
Sopen05g003530 Solanum pennellii HOM05D000011 ORTHO05D000018 1.8e-62 242.7 137 89.1
CAN.G1335.5 Capsicum annuum HOM05D000011 ORTHO05D000018 1.6e-42 176.4 138 69.6
Solyc05g007620.1 Solanum lycopersicum HOM05D000011 ORTHO05D010520 3.4e-40 168.7 85 98.8
PGSC0003DMG400018441 Solanum tuberosum HOM05D000011 ORTHO05D000018 2.3e-33 146.0 83 89.2
Peaxi162Scf00222g00911 Petunia axillaris HOM05D000011 ORTHO05D010520 1.9e-30 136.3 136 57.4
Peaxi162Scf00222g00096 Petunia axillaris HOM05D000011 ORTHO05D010520 4.6e-29 131.7 145 53.1
Peaxi162Scf00222g00915 Petunia axillaris HOM05D000011 ORTHO05D010520 6.0e-29 131.3 141 53.9
Nitab4.5_0001503g0020 Nicotiana tabacum HOM05D000011 ORTHO05D010520 1.2e-24 117.1 132 48.5
Solyc05g007610.2 Solanum lycopersicum HOM05D000011 ORTHO05D000018 8.3e-23 110.9 133 45.9
CAN.G1335.4 Capsicum annuum HOM05D000011 ORTHO05D002202 1.4e-22 110.2 133 48.1
Nitab4.5_0000145g0040 Nicotiana tabacum HOM05D000011 ORTHO05D010520 1.9e-22 109.8 132 48.5
Sopen05g003490 Solanum pennellii HOM05D000011 ORTHO05D000018 1.9e-22 109.8 133 45.9
PGSC0003DMG400018442 Solanum tuberosum HOM05D000011 ORTHO05D000018 5.4e-22 108.2 133 45.9
Solyc05g007630.3 Solanum lycopersicum HOM05D000011 ORTHO05D000018 1.0e-20 104.0 137 43.8
Peaxi162Scf00222g01021 Petunia axillaris HOM05D000011 ORTHO05D010520 5.6e-19 98.2 123 47.2
PGSC0003DMG400023062 Solanum tuberosum HOM05D000011 ORTHO05D000018 5.6e-19 98.2 154 39.6
Solyc05g007350.3 Solanum lycopersicum HOM05D000011 ORTHO05D000018 1.2e-18 97.1 152 39.5
CAN.G1099.15 Capsicum annuum HOM05D000011 ORTHO05D000018 4.7e-18 95.1 146 39.0
Nitab4.5_0006086g0010 Nicotiana tabacum HOM05D000011 ORTHO05D000018 4.9e-15 85.1 145 41.4
Peaxi162Scf00378g00311 Petunia axillaris HOM05D000011 ORTHO05D010520 4.9e-15 85.1 141 41.8
Sopen05g003520 Solanum pennellii HOM05D000011 ORTHO05D000018 6.4e-15 84.7 134 38.1
CAN.G767.27 Capsicum annuum HOM05D000011 ORTHO05D000018 3.5e-13 79.0 146 37.0
Nitab4.5_0006086g0020 Nicotiana tabacum HOM05D000011 ORTHO05D000018 4.6e-13 78.6 142 40.1
Peaxi162Scf01501g00015 Petunia axillaris HOM05D000011 ORTHO05D010520 7.8e-13 77.8 140 38.6
Nitab4.5_0007378g0030 Nicotiana tabacum HOM05D000011 ORTHO05D000018 3.0e-12 75.9 145 40.0
CAN.G1207.1 Capsicum annuum HOM05D000011 ORTHO05D000018 3.9e-12 75.5 164 33.5
CAN.G767.30 Capsicum annuum HOM05D000011 ORTHO05D000018 3.9e-12 75.5 142 38.7
Nitab4.5_0007378g0060 Nicotiana tabacum HOM05D000011 ORTHO05D010520 3.9e-12 75.5 140 37.1
Nitab4.5_0006086g0030 Nicotiana tabacum HOM05D000011 ORTHO05D000018 1.1e-11 73.9 140 36.4
Nitab4.5_0004661g0100 Nicotiana tabacum HOM05D000011 ORTHO05D010520 1.5e-11 73.6 137 38.0
Nitab4.5_0012424g0010 Nicotiana tabacum HOM05D000011 ORTHO05D010520 1.5e-11 73.6 141 38.3
Nitab4.5_0006086g0040 Nicotiana tabacum HOM05D000011 ORTHO05D000018 3.3e-11 72.4 145 37.2
CAN.G767.32 Capsicum annuum HOM05D000011 ORTHO05D000018 4.3e-11 72.0 146 35.6
Nitab4.5_0007378g0050 Nicotiana tabacum HOM05D000011 ORTHO05D000018 5.6e-11 71.6 145 38.6
Nitab4.5_0009999g0030 Nicotiana tabacum HOM05D000011 ORTHO05D010520 1.2e-10 70.5 143 34.3
Nitab4.5_0004661g0040 Nicotiana tabacum HOM05D000011 ORTHO05D010520 2.4e-09 66.2 135 33.3
Nitab4.5_0013571g0010 Nicotiana tabacum HOM05D000011 ORTHO05D000018 2.4e-09 66.2 108 38.9
Peaxi162Scf00378g00212 Petunia axillaris HOM05D000011 ORTHO05D010520 2.4e-09 66.2 91 47.3
Sopen05g003260 Solanum pennellii HOM05D000011 ORTHO05D000018 3.1e-09 65.9 104 36.5
Nitab4.5_0010766g0010 Nicotiana tabacum HOM05D000011 ORTHO05D000018 4.0e-09 65.5 119 36.1
CAN.G1069.15 Capsicum annuum HOM05D000011 ORTHO05D000018 8.9e-09 64.3 146 33.6
PGSC0003DMG400013506 Solanum tuberosum HOM05D000011 ORTHO05D000018 2.0e-08 63.2 141 33.3
Nitab4.5_0000391g0020 Nicotiana tabacum HOM05D000011 ORTHO05D000018 3.4e-08 62.4 119 38.7
Solyc05g005330.3 Solanum lycopersicum HOM05D000011 ORTHO05D000018 1.3e-07 60.5 144 33.3
Sopen05g001340 Solanum pennellii HOM05D000011 ORTHO05D000018 1.7e-07 60.1 144 33.3
CAN.G58.60 Capsicum annuum HOM05D000011 ORTHO05D010520 2.2e-07 59.7 62 51.6
CAN.G767.31 Capsicum annuum HOM05D000011 ORTHO05D000018 1.4e-06 57.0 113 35.4
Nitab4.5_0007378g0020 Nicotiana tabacum HOM05D000011 ORTHO05D000018 1.4e-06 57.0 88 39.8
Nitab4.5_0005865g0030 Nicotiana tabacum HOM05D000011 ORTHO05D010520 1.9e-06 56.6 118 36.4
Peaxi162Scf00083g00194 Petunia axillaris HOM05D000011 ORTHO05D010520 2.4e-06 56.2 96 37.5
Peaxi162Scf01176g00132 Petunia axillaris HOM05D000011 ORTHO05D010520 2.4e-06 56.2 118 33.1
Peaxi162Scf01176g00024 Petunia axillaris HOM05D000011 ORTHO05D010520 3.2e-06 55.8 145 31.0
CAN.G767.29 Capsicum annuum HOM05D000011 ORTHO05D000018 7.1e-06 54.7 120 33.3
Nitab4.5_0010109g0010 Nicotiana tabacum HOM05D000011 ORTHO05D020908 7.1e-06 54.7 155 31.0
PGSC0003DMG400031265 Solanum tuberosum HOM05D000011 ORTHO05D010520 9.2e-06 54.3 36 72.2


User provided reference genes

Program Settings