Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc05g006610.4 Solanum lycopersicum HOM05D004965 ORTHO05D004401 8.1e-35 149.8 74 100.0
Sopen05g002550 Solanum pennellii HOM05D004965 ORTHO05D004401 8.1e-35 149.8 74 100.0
PGSC0003DMG400022630 Solanum tuberosum HOM05D004965 ORTHO05D004401 7.1e-31 136.7 74 94.6
Cpa.g.sc14.63 Carica papaya HOM05D004965 ORTHO05D004401 5.3e-10 67.4 63 57.1
Gohir.A03G144700 Gossypium hirsutum HOM05D004965 ORTHO05D004401 5.8e-09 63.9 37 78.4
Manes.15G177900 Manihot esculenta HOM05D004965 ORTHO05D004401 5.8e-09 63.9 40 70.0
Gohir.D02G167800 Gossypium hirsutum HOM05D004965 ORTHO05D004401 7.6e-09 63.5 37 75.7
Gorai.005G188200 Gossypium raimondii HOM05D004965 ORTHO05D004401 7.6e-09 63.5 37 75.7
Lalb_Chr16g0382641 Lupinus albus HOM05D004965 ORTHO05D004401 1.3e-08 62.8 56 55.4
Prupe.1G263100 Prunus persica HOM05D004965 ORTHO05D004401 1.3e-08 62.8 37 78.4
Thecc.02G237300 Theobroma cacao HOM05D004965 ORTHO05D004401 1.3e-08 62.8 36 77.8
Atru.chr8.2466 Acer truncatum HOM05D004965 ORTHO05D004401 4.9e-08 60.8 44 65.9
Lj2g0004313 Lotus japonicus HOM05D004965 ORTHO05D004401 4.9e-08 60.8 35 77.1
FAN07G0801 Fragaria x ananassa HOM05D004965 ORTHO05D004401 6.5e-08 60.5 37 73.0
Lju41A28T116 Lonicera japonica HOM05D004965 ORTHO05D004401 6.5e-08 60.5 62 48.4
Lalb_Chr05g0217401 Lupinus albus HOM05D004965 ORTHO05D004401 6.5e-08 60.5 58 51.7
CSS0043755 Camellia sinensis var. sinensis HOM05D004965 ORTHO05D004401 8.4e-08 60.1 33 78.8
Dinv24933 Davidia involucrata HOM05D004965 ORTHO05D004401 8.4e-08 60.1 37 75.7
FAN22G1750 Fragaria x ananassa HOM05D004965 ORTHO05D004401 8.4e-08 60.1 37 73.0
Glyma.01G038900 Glycine max HOM05D004965 ORTHO05D004401 8.4e-08 60.1 34 79.4
Glyma.02G025700 Glycine max HOM05D004965 ORTHO05D004401 8.4e-08 60.1 34 79.4
Phvul.002G079000 Phaseolus vulgaris HOM05D004965 ORTHO05D004401 8.4e-08 60.1 34 79.4
RcHm_v2.0_Chr4g0445011 Rosa chinensis HOM05D004965 ORTHO05D004401 8.4e-08 60.1 37 73.0
arahy.Tifrunner.gnm1.ann1.0GIF91 Arachis hypogaea HOM05D004965 ORTHO05D004401 1.1e-07 59.7 35 80.0
EL10Ac6g13083 Beta vulgaris HOM05D004965 ORTHO05D004401 1.1e-07 59.7 34 76.5
Cc11_g13890 Coffea canephora HOM05D004965 ORTHO05D004401 1.1e-07 59.7 38 68.4
Lsat_1_v5_gn_8_161261 Lactuca sativa HOM05D004965 ORTHO05D004401 1.1e-07 59.7 55 60.0
Atru.chr11.1915 Acer truncatum HOM05D004965 ORTHO05D004401 1.4e-07 59.3 34 76.5
Ciclev10033175m.g Citrus clementina HOM05D004965 ORTHO05D004401 1.9e-07 58.9 36 72.2
Duzib248G0243 Durio zibethinus HOM05D004965 ORTHO05D004401 1.9e-07 58.9 49 59.2
FvH4_4g35400 Fragaria vesca HOM05D004965 ORTHO05D004401 1.9e-07 58.9 37 70.3
FAN12G3850 Fragaria x ananassa HOM05D004965 ORTHO05D004401 1.9e-07 58.9 37 70.3
Psat2g116360 Pisum sativum HOM05D004965 ORTHO05D004401 1.9e-07 58.9 34 76.5
Hund25308 Selenicereus undatus HOM05D004965 ORTHO05D004401 1.9e-07 58.9 33 78.8
Thecc.04G069500 Theobroma cacao HOM05D004965 ORTHO05D004401 1.9e-07 58.9 39 69.2
GSVIVG01020127001 Vitis vinifera HOM05D004965 ORTHO05D004401 1.9e-07 58.9 37 67.6
Haze_14606 Corylus avellana HOM05D004965 ORTHO05D004401 2.5e-07 58.5 38 71.1
Nn3g17067 Nelumbo nucifera HOM05D004965 ORTHO05D004401 2.5e-07 58.5 37 73.0
TAR374G1442 Trochodendron aralioides HOM05D004965 ORTHO05D004401 2.5e-07 58.5 38 68.4
TAR629G2889 Trochodendron aralioides HOM05D004965 ORTHO05D004401 2.5e-07 58.5 37 70.3
Gohir.D01G133500 Gossypium hirsutum HOM05D004965 ORTHO05D004401 3.2e-07 58.2 35 77.1
Gorai.002G165000 Gossypium raimondii HOM05D004965 ORTHO05D004401 3.2e-07 58.2 35 77.1
MBI04_g09739_MAGBIO Magnolia biondii HOM05D004965 ORTHO05D004401 3.2e-07 58.2 35 71.4
Medtr5g037140 Medicago truncatula HOM05D004965 ORTHO05D004401 3.2e-07 58.2 33 78.8
Potri.017G074600 Populus trichocarpa HOM05D004965 ORTHO05D004401 3.2e-07 58.2 48 58.3
SalBow8G5011 Salvia bowleyana HOM05D004965 ORTHO05D004401 4.2e-07 57.8 36 69.4
TWI56G0241 Tripterygium wilfordii HOM05D004965 ORTHO05D004401 4.2e-07 57.8 44 59.1
Duzib251G0216 Durio zibethinus HOM05D004965 ORTHO05D004401 5.5e-07 57.4 37 70.3
Duzib187G0871 Durio zibethinus HOM05D004965 ORTHO05D004401 7.1e-07 57.0 36 72.2
Gohir.A01G142000 Gossypium hirsutum HOM05D004965 ORTHO05D004401 7.1e-07 57.0 35 74.3
Nn4g22977 Nelumbo nucifera HOM05D004965 ORTHO05D004401 7.1e-07 57.0 37 70.3
CANSAT01G1612 Cannabis sativa HOM05D004965 ORTHO05D004401 9.3e-07 56.6 37 75.7
Actinidia06052 Actinidia chinensis HOM05D004965 ORTHO05D004401 1.2e-06 56.2 39 71.8
CiPaw.06G078100 Carya illinoinensis HOM05D004965 ORTHO05D004401 1.2e-06 56.2 35 71.4
ClCG08G009090 Citrullus lanatus HOM05D004965 ORTHO05D004401 1.2e-06 56.2 37 70.3
TAR369G0013 Trochodendron aralioides HOM05D004965 ORTHO05D004401 1.2e-06 56.2 37 70.3
Gohir.A07G216700 Gossypium hirsutum HOM05D004965 ORTHO05D004401 1.6e-06 55.8 31 80.6
Gohir.D07G223500 Gossypium hirsutum HOM05D004965 ORTHO05D004401 1.6e-06 55.8 31 80.6
Gorai.001G257800 Gossypium raimondii HOM05D004965 ORTHO05D004401 1.6e-06 55.8 31 80.6
MBI01_g13075_MAGBIO Magnolia biondii HOM05D004965 ORTHO05D004401 1.6e-06 55.8 36 69.4
PGSC0003DMG400004191 Solanum tuberosum HOM05D004965 ORTHO05D004401 1.6e-06 55.8 48 62.5
CiPaw.04G021200 Carya illinoinensis HOM05D004965 ORTHO05D004401 2.1e-06 55.5 39 64.1
Lalb_Chr09g0326631 Lupinus albus HOM05D004965 ORTHO05D004401 2.1e-06 55.5 56 50.0
MD16G1082900 Malus domestica HOM05D004965 ORTHO05D004401 2.1e-06 55.5 38 73.7
CiPaw.05G143500 Carya illinoinensis HOM05D004965 ORTHO05D004401 2.7e-06 55.1 36 66.7
MD13G1083500 Malus domestica HOM05D004965 ORTHO05D004401 2.7e-06 55.1 37 73.0
Medtr6g009390 Medicago truncatula HOM05D004965 ORTHO05D004401 2.7e-06 55.1 39 66.7
TWI36G1294 Tripterygium wilfordii HOM05D004965 ORTHO05D004401 2.7e-06 55.1 33 72.7
Aqoxy3G03187 Aquilegia oxysepala HOM05D004965 ORTHO05D004401 3.5e-06 54.7 39 66.7
PGR119G0489 Punica granatum HOM05D004965 ORTHO05D004401 3.5e-06 54.7 32 75.0
Solyc01g011105.1 Solanum lycopersicum HOM05D004965 ORTHO05D004401 3.5e-06 54.7 61 50.8
Potri.010G039800 Populus trichocarpa HOM05D004965 ORTHO05D004401 4.6e-06 54.3 37 67.6
Sed0027722 Sechium edule HOM05D004965 ORTHO05D004401 4.6e-06 54.3 40 67.5
TPR.G32595 Trifolium pratense HOM05D004965 ORTHO05D004401 4.6e-06 54.3 55 56.4
Carub.0002s1667 Capsella rubella HOM05D010176 ORTHO05D012455 6.0e-06 53.9 29 82.8
CiPaw.03G032200 Carya illinoinensis HOM05D004965 ORTHO05D004401 6.0e-06 53.9 37 70.3
COL.COLO4_36990 Corchorus olitorius HOM05D004965 ORTHO05D004401 6.0e-06 53.9 30 83.3
MELO3C026507.2 Cucumis melo HOM05D004965 ORTHO05D004401 6.0e-06 53.9 36 69.4
CsaV3_5G037710 Cucumis sativus L. HOM05D004965 ORTHO05D004401 6.0e-06 53.9 36 69.4
CsaV3_6G036050 Cucumis sativus L. HOM05D004965 ORTHO05D004401 6.0e-06 53.9 36 69.4
ATR0665G516 Amborella trichopoda HOM05D004965 ORTHO05D004401 7.9e-06 53.5 36 72.2
Potri.008G191500 Populus trichocarpa HOM05D004965 ORTHO05D004401 7.9e-06 53.5 35 71.4


User provided reference genes

Program Settings