Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc05g006080.1 Solanum lycopersicum HOM05D006260 ORTHO05D007860 6.6e-91 337.4 179 100.0
Sopen05g002100 Solanum pennellii HOM05D006260 ORTHO05D007860 6.6e-91 337.4 179 100.0
PGSC0003DMG400015598 Solanum tuberosum HOM05D006260 ORTHO05D007860 5.6e-90 334.3 179 98.3
Nitab4.5_0000257g0210 Nicotiana tabacum HOM05D006260 ORTHO05D007860 3.0e-83 312.0 179 90.5
CAN.G1341.6 Capsicum annuum HOM05D006260 ORTHO05D007860 6.6e-83 310.8 179 91.6
Nitab4.5_0009368g0010 Nicotiana tabacum HOM05D006260 ORTHO05D007860 2.5e-82 308.9 179 89.4
Oeu043898.1 Olea europaea HOM05D006260 ORTHO05D007860 1.1e-74 283.5 181 84.5
Oeu012389.1 Olea europaea HOM05D006260 ORTHO05D007860 9.0e-72 273.9 181 81.8
Migut.J00776 Erythranthe guttata HOM05D006260 ORTHO05D007860 7.6e-71 270.8 169 83.4
Cc05_g06400 Coffea canephora HOM05D006260 ORTHO05D007860 1.3e-70 270.0 179 81.0
Peaxi162Scf00421g00071 Petunia axillaris HOM05D006260 ORTHO05D007860 6.4e-70 267.7 166 84.3
SalBow3G0163 Salvia bowleyana HOM05D006260 ORTHO05D007860 1.4e-69 266.5 164 83.5
MD16G1245000 Malus domestica HOM05D006260 ORTHO05D007860 2.4e-69 265.8 177 80.8
MSTRG.19359 Avicennia marina HOM05D006260 ORTHO05D007860 3.2e-69 265.4 170 81.8
Prupe.1G072000 Prunus persica HOM05D006260 ORTHO05D007860 4.2e-69 265.0 179 78.2
Lj5A659T18 Lonicera japonica HOM05D006260 ORTHO05D007860 5.4e-69 264.6 179 80.4
unitig_8.g4053 Utricularia gibba HOM05D006260 ORTHO05D007860 5.4e-69 264.6 154 86.4
ClCG06G013810 Citrullus lanatus HOM05D006260 ORTHO05D007860 1.6e-68 263.1 179 78.8
Gohir.D04G006400 Gossypium hirsutum HOM05D006260 ORTHO05D007860 1.6e-68 263.1 179 77.7
Gorai.012G007800 Gossypium raimondii HOM05D006260 ORTHO05D007860 1.6e-68 263.1 179 77.7
Potri.018G139600 Populus trichocarpa HOM05D006260 ORTHO05D007860 3.5e-68 261.9 179 76.0
Ah.14g085330 Amaranthus hybridus HOM05D006260 ORTHO05D007860 7.9e-68 260.8 168 82.1
COL.COLO4_14462 Corchorus olitorius HOM05D006260 ORTHO05D007860 7.9e-68 260.8 179 78.2
Gohir.A05G409000 Gossypium hirsutum HOM05D006260 ORTHO05D007860 7.9e-68 260.8 179 77.1
Gohir.D04G006600 Gossypium hirsutum HOM05D006260 ORTHO05D007860 7.9e-68 260.8 179 77.1
Gorai.012G008000 Gossypium raimondii HOM05D006260 ORTHO05D007860 7.9e-68 260.8 179 77.1
GSVIVG01029271001 Vitis vinifera HOM05D006260 ORTHO05D007860 7.9e-68 260.8 179 78.2
CiPaw.08G031300 Carya illinoinensis HOM05D006260 ORTHO05D007860 1.0e-67 260.4 179 77.7
Gohir.A05G408800 Gossypium hirsutum HOM05D006260 ORTHO05D007860 1.3e-67 260.0 179 77.7
MELO3C017413.2 Cucumis melo HOM05D006260 ORTHO05D007860 1.8e-67 259.6 179 77.1
MD16G1244900 Malus domestica HOM05D006260 ORTHO05D007860 1.8e-67 259.6 177 78.5
Rhsim01G0114100 Rhododendron simsii HOM05D006260 ORTHO05D007860 1.8e-67 259.6 179 75.4
Glyma.09G061600 Glycine max HOM05D006260 ORTHO05D007860 2.3e-67 259.2 161 82.6
Thecc.09G192000 Theobroma cacao HOM05D006260 ORTHO05D007860 2.3e-67 259.2 179 76.5
Atru.chr7.896 Acer truncatum HOM05D006260 ORTHO05D007860 3.0e-67 258.8 179 79.9
CsaV3_1G032030 Cucumis sativus L. HOM05D006260 ORTHO05D007860 3.0e-67 258.8 179 77.1
MBI14_g10729_MAGBIO Magnolia biondii HOM05D006260 ORTHO05D007860 3.0e-67 258.8 179 76.0
Haze_22050 Corylus avellana HOM05D006260 ORTHO05D007860 5.1e-67 258.1 179 75.4
Lj6g0019941 Lotus japonicus HOM05D006260 ORTHO05D007860 6.7e-67 257.7 179 76.5
Sp7g27680 Schrenkiella parvula HOM05D006260 ORTHO05D007860 6.7e-67 257.7 179 74.9
vmacro20799 Vaccinium macrocarpon HOM05D006260 ORTHO05D007860 6.7e-67 257.7 179 75.4
Lj5A660T21 Lonicera japonica HOM05D006260 ORTHO05D007860 8.7e-67 257.3 179 77.7
Lj5A667T13 Lonicera japonica HOM05D006260 ORTHO05D007860 8.7e-67 257.3 179 79.9
Lalb_Chr23g0276701 Lupinus albus HOM05D006260 ORTHO05D007860 1.1e-66 256.9 179 74.9
SGA_v2.0_scaffold31G12783 Striga asiatica HOM05D006260 ORTHO05D007860 1.1e-66 256.9 160 83.1
Psat1g142480 Pisum sativum HOM05D006260 ORTHO05D007860 1.5e-66 256.5 177 74.0
AL7G22380 Arabidopsis lyrata HOM05D006260 ORTHO05D007860 1.9e-66 256.1 179 76.0
Carub.0004s1476 Capsella rubella HOM05D006260 ORTHO05D007860 2.5e-66 255.8 179 77.1
TPR.G2550 Trifolium pratense HOM05D006260 ORTHO05D007860 2.5e-66 255.8 179 73.7
Glyma.15G167900 Glycine max HOM05D006260 ORTHO05D007860 3.3e-66 255.4 176 75.0
FvH4_4g06900 Fragaria vesca HOM05D006260 ORTHO05D007860 4.3e-66 255.0 179 76.0
RcHm_v2.0_Chr4g0398801 Rosa chinensis HOM05D006260 ORTHO05D007860 4.3e-66 255.0 180 75.0
Hma1.2p1_0478F.1_g161140 Hydrangea macrophylla HOM05D006260 ORTHO05D007860 5.6e-66 254.6 180 77.2
TWI63G0540 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 9.6e-66 253.8 179 74.9
Thhalv10026375m.g Eutrema salsugineum HOM05D006260 ORTHO05D007860 1.3e-65 253.4 179 74.9
FAN12G1915 Fragaria x ananassa HOM05D006260 ORTHO05D007860 1.3e-65 253.4 178 75.8
Potri.006G072600 Populus trichocarpa HOM05D006260 ORTHO05D007860 1.3e-65 253.4 179 74.3
CARHR237780 Cardamine hirsuta HOM05D006260 ORTHO05D007860 1.6e-65 253.1 179 74.9
FAN22G1136 Fragaria x ananassa HOM05D006260 ORTHO05D007860 1.6e-65 253.1 174 77.0
Sed0022699 Sechium edule HOM05D006260 ORTHO05D007860 1.6e-65 253.1 179 74.3
CANSAT11G1813 Cannabis sativa HOM05D006260 ORTHO05D007860 2.1e-65 252.7 177 75.1
FAN07G2370 Fragaria x ananassa HOM05D006260 ORTHO05D007860 2.1e-65 252.7 178 75.3
Eucgr.C00083 Eucalyptus grandis HOM05D006260 ORTHO05D007860 2.8e-65 252.3 177 74.0
Manes.14G161300 Manihot esculenta HOM05D006260 ORTHO05D007860 2.8e-65 252.3 154 83.8
TWI38G0675 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 2.8e-65 252.3 179 74.3
CANSAT21G0469 Cannabis sativa HOM05D006260 ORTHO05D007860 3.7e-65 251.9 177 74.0
Medtr2g038390 Medicago truncatula HOM05D006260 ORTHO05D007860 3.7e-65 251.9 177 75.7
AT4G29870 Arabidopsis thaliana HOM05D006260 ORTHO05D007860 4.8e-65 251.5 179 74.3
CSS0028862 Camellia sinensis var. sinensis HOM05D006260 ORTHO05D007860 6.2e-65 251.1 179 74.3
CARHR109790 Cardamine hirsuta HOM05D006260 ORTHO05D007860 8.1e-65 250.8 179 74.9
PGR018G0003 Punica granatum HOM05D006260 ORTHO05D007860 8.1e-65 250.8 180 73.3
PGR142G0891 Punica granatum HOM05D006260 ORTHO05D007860 8.1e-65 250.8 180 73.3
PGR142G1877 Punica granatum HOM05D006260 ORTHO05D007860 8.1e-65 250.8 180 73.3
C01p09330 Brassica napus HOM05D006260 ORTHO05D007860 1.1e-64 250.4 179 72.1
BolC1t00921H Brassica oleracea HOM05D006260 ORTHO05D007860 1.1e-64 250.4 179 72.1
Carub.0003s3356 Capsella rubella HOM05D006260 ORTHO05D007860 1.1e-64 250.4 179 74.9
Ciclev10009690m.g Citrus clementina HOM05D006260 ORTHO05D007860 1.1e-64 250.4 179 76.5
DCAR_018008 Daucus carota HOM05D006260 ORTHO05D007860 1.4e-64 250.0 153 85.0
A01p08290 Brassica napus HOM05D006260 ORTHO05D007860 2.4e-64 249.2 179 70.9
BraA01t00777Z Brassica rapa HOM05D006260 ORTHO05D007860 2.4e-64 249.2 179 70.9
Phvul.009G234400 Phaseolus vulgaris HOM05D006260 ORTHO05D007860 3.1e-64 248.8 176 71.6
SGA_v2.0_scaffold112G31634 Striga asiatica HOM05D006260 ORTHO05D007860 3.1e-64 248.8 151 83.4
Ah.09g228540 Amaranthus hybridus HOM05D006260 ORTHO05D007860 4.0e-64 248.4 179 74.9
CDE07G0891 Ceratophyllum demersum HOM05D006260 ORTHO05D007860 4.0e-64 248.4 153 82.4
Aa31LG2G20680 Aethionema arabicum HOM05D006260 ORTHO05D007860 5.3e-64 248.1 177 73.4
ATR0580G108 Amborella trichopoda HOM05D006260 ORTHO05D007860 6.9e-64 247.7 179 72.6
AUR62027428 Chenopodium quinoa HOM05D006260 ORTHO05D007860 1.2e-63 246.9 178 77.0
C07p57300 Brassica napus HOM05D006260 ORTHO05D007860 3.4e-63 245.4 169 72.2
Lsat_1_v5_gn_7_55181 Lactuca sativa HOM05D006260 ORTHO05D007860 3.4e-63 245.4 153 79.7
BolC7t46199H Brassica oleracea HOM05D006260 ORTHO05D007860 5.8e-63 244.6 169 72.2
BraA03t14986Z Brassica rapa HOM05D006260 ORTHO05D007860 5.8e-63 244.6 179 69.3
A03p59290 Brassica napus HOM05D006260 ORTHO05D007860 2.2e-62 242.7 179 68.7
Ca_02129_v3 Cicer arietinum L. HOM05D006260 ORTHO05D007860 8.4e-62 240.7 151 77.5
HanXRQChr09g0245351 Helianthus annuus HOM05D006260 ORTHO05D007860 1.9e-61 239.6 153 79.1
Aqoxy7G02900 Aquilegia oxysepala HOM05D006260 ORTHO05D007860 4.2e-61 238.4 167 74.9
SHI03067 Sapria himalayana HOM05D006260 ORTHO05D007860 1.0e-59 233.8 154 77.9
Zm00001eb112720 Zea mays HOM05D006260 ORTHO05D007860 1.0e-59 233.8 178 70.8
AT2G19340 Arabidopsis thaliana HOM05D006260 ORTHO05D007860 5.1e-59 231.5 165 73.9
Sc18g0003820 Simmondsia chinensis HOM05D006260 ORTHO05D007860 6.7e-59 231.1 177 71.2
TAR383G0359 Trochodendron aralioides HOM05D006260 ORTHO05D007860 8.7e-59 230.7 167 72.5
Zm00001eb169590 Zea mays HOM05D006260 ORTHO05D007860 1.1e-58 230.3 178 69.1
CiPaw.07G199300 Carya illinoinensis HOM05D006260 ORTHO05D007860 9.6e-58 227.3 152 75.0
Manes.06G017400 Manihot esculenta HOM05D006260 ORTHO05D007860 1.3e-57 226.9 142 79.6
HPP92_027392 Vanilla planifolia HOM05D006260 ORTHO05D007860 2.8e-57 225.7 178 67.4
FAN17G2269 Fragaria x ananassa HOM05D006260 ORTHO05D007860 2.4e-56 222.6 155 74.2
CDE06G1002 Ceratophyllum demersum HOM05D006260 ORTHO05D007860 1.2e-55 220.3 137 80.3
Mapoly0039s0076 Marchantia polymorpha HOM05D006260 ORTHO05D007860 1.4e-53 213.4 152 71.7
PSO170G1526 Papaver somniferum HOM05D006260 ORTHO05D007860 3.2e-53 212.2 131 80.9
QL02p064675 Quercus lobata HOM05D006260 ORTHO05D007860 2.7e-52 209.1 167 67.7
Sed0019929 Sechium edule HOM05D006260 ORTHO05D007860 1.3e-51 206.8 152 72.4
CBR_g37526 Chara braunii HOM05D006260 ORTHO05D007860 1.1e-50 203.8 153 66.0
Cpa.g.sc115.60 Carica papaya HOM05D006260 ORTHO05D007860 5.7e-50 201.4 118 87.3
SMO329G0049 Selaginella moellendorffii HOM05D006260 ORTHO05D007860 8.2e-49 197.6 154 67.5
TAR626G1894 Trochodendron aralioides HOM05D006260 ORTHO05D007860 4.1e-48 195.3 120 84.2
Sabra06G0054000 Salix brachista HOM05D006260 ORTHO05D007860 5.3e-48 194.9 120 83.3
SEGI_37789 Sequoiadendron giganteum HOM05D006260 ORTHO05D007860 1.5e-47 193.4 169 62.7
AUR62031268 Chenopodium quinoa HOM05D006260 ORTHO05D007860 2.9e-46 189.1 107 89.7
ECA240G0773 Erigeron canadensis HOM05D006260 ORTHO05D007860 2.5e-45 186.0 121 80.2
EL10Ac8g19294 Beta vulgaris HOM05D006260 ORTHO05D007860 1.6e-44 183.3 107 86.9
AagrBONN_evm.TU.Sc2ySwM_362.1716 Anthoceros agrestis HOM05D006260 ORTHO05D007860 2.7e-44 182.6 152 59.9
Sabra18G0114100 Salix brachista HOM05D006260 ORTHO05D007860 3.6e-44 182.2 108 87.0
Pp3c5_8110 Physcomitrium patens HOM05D006260 ORTHO05D007860 3.9e-43 178.7 131 66.4
BcaNung00497 Brassica carinata HOM05D006260 ORTHO05D007860 1.9e-37 159.8 129 67.4
Lj5C609T1 Lonicera japonica HOM05D006260 ORTHO05D007860 2.0e-34 149.8 91 82.4
Cre12.g528150 Chlamydomonas reinhardtii HOM05D006260 ORTHO05D007860 4.2e-29 132.1 123 49.6
TWI39G0723 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 2.4e-16 89.7 106 52.8
MD13G1241300 Malus domestica HOM05D006260 ORTHO05D249159 3.1e-08 62.8 118 44.9


User provided reference genes

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