Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen04g036620 Solanum pennellii HOM05D007175 ORTHO05D009032 1.5e-95 352.8 177 100.0
CAN.G1330.33 Capsicum annuum HOM05D007175 ORTHO05D009032 6.0e-60 234.6 133 83.5
Peaxi162Scf00385g01229 Petunia axillaris HOM05D007175 ORTHO05D009032 1.6e-52 209.9 134 73.9
Hma1.2p1_0810F.1_g221930 Hydrangea macrophylla HOM05D007175 ORTHO05D009032 1.4e-45 186.8 133 64.7
CSS0024225 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 2.4e-45 186.0 135 65.2
Oeu000737.1 Olea europaea HOM05D007175 ORTHO05D009032 3.2e-45 185.7 133 66.2
Actinidia37900 Actinidia chinensis HOM05D007175 ORTHO05D009032 5.4e-45 184.9 135 61.5
Dinv30325 Davidia involucrata HOM05D007175 ORTHO05D009032 4.6e-44 181.8 135 64.4
CSS0000573 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 8.7e-43 177.6 135 62.2
Rhsim07G0258300 Rhododendron simsii HOM05D007175 ORTHO05D009032 3.3e-42 175.6 134 61.2
Atru.chr13.18 Acer truncatum HOM05D007175 ORTHO05D009032 7.3e-42 174.5 133 60.9
Lj4A814G51 Lonicera japonica HOM05D007175 ORTHO05D009032 2.8e-41 172.6 133 63.9
Gohir.D01G086300 Gossypium hirsutum HOM05D007175 ORTHO05D009032 1.4e-40 170.2 155 54.8
Gohir.A01G101333 Gossypium hirsutum HOM05D007175 ORTHO05D009032 5.3e-40 168.3 155 54.2
Gorai.002G111700 Gossypium raimondii HOM05D007175 ORTHO05D009032 5.3e-40 168.3 155 54.2
ATR0605G370 Amborella trichopoda HOM05D007175 ORTHO05D009032 2.6e-39 166.0 133 58.6
DCAR_013353 Daucus carota HOM05D007175 ORTHO05D009032 5.8e-39 164.9 133 54.9
QL02p016318 Quercus lobata HOM05D007175 ORTHO05D009032 6.4e-38 161.4 133 57.1
Cpa.g.sc36.96 Carica papaya HOM05D007175 ORTHO05D009032 8.4e-38 161.0 130 59.2
Cc10_g00080 Coffea canephora HOM05D007175 ORTHO05D009032 1.4e-37 160.2 129 57.4
AUR62035193 Chenopodium quinoa HOM05D007175 ORTHO05D009032 2.4e-37 159.5 155 49.7
GSVIVG01013462001 Vitis vinifera HOM05D007175 ORTHO05D009032 2.4e-37 159.5 133 55.6
Cfa014168 Carpinus fangiana HOM05D007175 ORTHO05D009032 4.2e-37 158.7 133 55.6
Haze_22891 Corylus avellana HOM05D007175 ORTHO05D009032 9.3e-37 157.5 133 57.1
Duzib116G0712 Durio zibethinus HOM05D007175 ORTHO05D009032 1.2e-36 157.1 133 58.6
Prupe.5G000900 Prunus persica HOM05D007175 ORTHO05D009032 1.6e-36 156.8 133 55.6
Thecc.08G097400 Theobroma cacao HOM05D007175 ORTHO05D009032 2.7e-36 156.0 133 57.1
CiPaw.07G130000 Carya illinoinensis HOM05D007175 ORTHO05D009032 4.6e-36 155.2 133 53.4
COL.COLO4_12263 Corchorus olitorius HOM05D007175 ORTHO05D009032 4.6e-36 155.2 132 57.6
CSS0003113 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 1.0e-35 154.1 133 57.9
Dinv30323 Davidia involucrata HOM05D000225 ORTHO05D001817 2.3e-35 152.9 121 58.7
PSO782G3151 Papaver somniferum HOM05D007175 ORTHO05D009032 2.3e-35 152.9 134 53.0
Manes.18G000500 Manihot esculenta HOM05D007175 ORTHO05D009032 3.0e-35 152.5 129 55.0
AUR62042532 Chenopodium quinoa HOM05D007175 ORTHO05D009032 6.6e-35 151.4 133 54.1
Eucgr.F03631 Eucalyptus grandis HOM05D007175 ORTHO05D009032 8.7e-35 151.0 133 52.6
Glyma.14G047400 Glycine max HOM05D007175 ORTHO05D009032 8.7e-35 151.0 133 54.1
Sabra05G0201000 Salix brachista HOM05D007175 ORTHO05D009032 2.5e-34 149.4 133 52.6
Sed0015844 Sechium edule HOM05D007175 ORTHO05D009032 3.3e-34 149.1 132 54.5
FAN08G3457 Fragaria x ananassa HOM05D007175 ORTHO05D009032 4.3e-34 148.7 137 51.8
Lalb_Chr10g0105651 Lupinus albus HOM05D007175 ORTHO05D009032 4.3e-34 148.7 133 52.6
PSO063G3513 Papaver somniferum HOM05D007175 ORTHO05D009032 4.3e-34 148.7 134 51.5
Aqoxy5G03363 Aquilegia oxysepala HOM05D007175 ORTHO05D009032 5.6e-34 148.3 133 50.4
FvH4_5g26760 Fragaria vesca HOM05D007175 ORTHO05D009032 5.6e-34 148.3 133 52.6
FAN18G0319 Fragaria x ananassa HOM05D007175 ORTHO05D009032 5.6e-34 148.3 133 52.6
Lalb_Chr17g0347321 Lupinus albus HOM05D007175 ORTHO05D009032 5.6e-34 148.3 133 53.4
CANSAT25G0321 Cannabis sativa HOM05D007175 ORTHO05D009032 2.1e-33 146.4 137 52.6
FAN04G1040 Fragaria x ananassa HOM05D007175 ORTHO05D009032 2.1e-33 146.4 137 51.8
FAN13G2687 Fragaria x ananassa HOM05D007175 ORTHO05D009032 2.8e-33 146.0 133 51.9
Ca_06102_v3 Cicer arietinum L. HOM05D007175 ORTHO05D009032 3.6e-33 145.6 128 53.1
ClCG11G019270 Citrullus lanatus HOM05D007175 ORTHO05D009032 4.8e-33 145.2 132 50.8
CsaV3_4G037860 Cucumis sativus L. HOM05D007175 ORTHO05D009032 6.2e-33 144.8 132 51.5
LjContig00564g0015126 Lotus japonicus HOM05D007175 ORTHO05D009032 6.2e-33 144.8 135 52.6
Nn5g31081 Nelumbo nucifera HOM05D007175 ORTHO05D009032 6.2e-33 144.8 132 54.5
Potri.005G259700 Populus trichocarpa HOM05D007175 ORTHO05D009032 8.1e-33 144.4 135 49.6
HPP92_018876 Vanilla planifolia HOM05D007175 ORTHO05D009032 1.4e-32 143.7 132 48.5
VMungo0647G1837 Vigna mungo HOM05D007175 ORTHO05D009032 1.4e-32 143.7 133 53.4
Ah.14g086450 Amaranthus hybridus HOM05D007175 ORTHO05D009032 2.4e-32 142.9 136 49.3
Glyma.02G269500 Glycine max HOM05D007175 ORTHO05D009032 3.1e-32 142.5 135 53.3
HanXRQChr14g0427501 Helianthus annuus HOM05D007175 ORTHO05D009032 3.1e-32 142.5 136 54.4
Psat2g024960 Pisum sativum HOM05D007175 ORTHO05D009032 3.1e-32 142.5 133 48.1
RcHm_v2.0_Chr7g0217631 Rosa chinensis HOM05D007175 ORTHO05D009032 3.1e-32 142.5 135 49.6
Phvul.008G212600 Phaseolus vulgaris HOM05D007175 ORTHO05D009032 6.9e-32 141.4 133 52.6
TAR376G0324 Trochodendron aralioides HOM05D007175 ORTHO05D009032 9.0e-32 141.0 134 53.0
EL10Ac1g01857 Beta vulgaris HOM05D007175 ORTHO05D009032 4.5e-31 138.7 135 51.9
TPR.G14442 Trifolium pratense HOM05D007175 ORTHO05D009032 5.8e-31 138.3 130 51.5
CARHR285020 Cardamine hirsuta HOM05D007175 ORTHO05D009032 7.6e-31 137.9 137 48.9
Medtr5g085780 Medicago truncatula HOM05D007175 ORTHO05D009032 1.3e-30 137.1 128 50.0
ECA238G4354 Erigeron canadensis HOM05D007175 ORTHO05D009032 3.8e-30 135.6 137 49.6
Thhalv10003204m.g Eutrema salsugineum HOM05D007175 ORTHO05D009032 3.8e-30 135.6 138 48.6
THA.LOC104806865 Tarenaya hassleriana HOM05D007175 ORTHO05D009032 4.9e-30 135.2 134 45.5
MELO3C017080.2 Cucumis melo HOM05D007175 ORTHO05D009032 1.4e-29 133.7 161 43.5
arahy.Tifrunner.gnm1.ann1.YTK8KP Arachis hypogaea HOM05D007175 ORTHO05D009032 5.4e-29 131.7 132 47.7
BcaB07g31081 Brassica carinata HOM05D007175 ORTHO05D009032 5.4e-29 131.7 138 47.1
BcaNung05249 Brassica carinata HOM05D007175 ORTHO05D009032 5.4e-29 131.7 138 47.1
arahy.Tifrunner.gnm1.ann1.BW2M8B Arachis hypogaea HOM05D000005 ORTHO05D009032 1.2e-28 130.6 132 47.0
CSS0005819 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 1.6e-28 130.2 127 52.8
Lsat_1_v5_gn_2_2721 Lactuca sativa HOM05D007175 ORTHO05D009032 1.6e-28 130.2 128 48.4
AL8G19150 Arabidopsis lyrata HOM05D007175 ORTHO05D009032 2.1e-28 129.8 137 44.5
BcaC04g21999 Brassica carinata HOM05D007175 ORTHO05D009032 2.7e-28 129.4 131 47.3
C09p25000 Brassica napus HOM05D007175 ORTHO05D009032 2.7e-28 129.4 131 47.3
Sp7g08160 Schrenkiella parvula HOM05D007175 ORTHO05D009032 6.0e-28 128.3 137 44.5
A09p19640 Brassica napus HOM05D007175 ORTHO05D009032 7.9e-28 127.9 131 47.3
BolC9t55392H Brassica oleracea HOM05D007175 ORTHO05D009032 3.9e-27 125.6 131 45.8
AagrBONN_evm.TU.Sc2ySwM_117.3655 Anthoceros agrestis HOM05D007175 ORTHO05D009032 5.1e-27 125.2 139 43.9
Mapoly0013s0050 Marchantia polymorpha HOM05D007175 ORTHO05D009032 1.5e-26 123.6 129 45.7
THA.LOC104801648 Tarenaya hassleriana HOM05D007175 ORTHO05D009032 3.3e-26 122.5 133 42.1
Carub.0008s0679 Capsella rubella HOM05D007175 ORTHO05D009032 1.3e-25 120.6 138 42.0
TWI36G1138 Tripterygium wilfordii HOM05D007175 ORTHO05D009032 1.3e-25 120.6 100 53.0
Os02g0592200 Oryza sativa ssp. japonica HOM05D007175 ORTHO05D009032 8.1e-25 117.9 133 42.1
Aa31LG9G12520 Aethionema arabicum HOM05D007175 ORTHO05D009032 1.8e-24 116.7 137 40.9
CSS0020086 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 4.2e-21 105.5 126 46.0
CSS0028611 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 4.2e-21 105.5 126 46.0
Pp3c5_8650 Physcomitrium patens HOM05D007175 ORTHO05D009032 7.1e-21 104.8 132 40.9
SMO259G0040 Selaginella moellendorffii HOM05D007175 ORTHO05D009032 7.1e-21 104.8 131 43.5
Ciclev10003552m.g Citrus clementina HOM05D007175 ORTHO05D009032 1.0e-19 100.9 86 53.5
AT5G42370 Arabidopsis thaliana HOM05D007175 ORTHO05D009032 3.9e-19 99.0 143 40.6
BraA09t37575Z Brassica rapa HOM05D007175 ORTHO05D009032 1.1e-16 90.9 139 39.6
CBR_g4433 Chara braunii HOM05D007175 ORTHO05D009032 2.9e-14 82.8 151 35.1
PGSC0003DMG400025665 Solanum tuberosum HOM05D007175 ORTHO05D009032 1.4e-13 80.5 48 85.4
Zm00001eb245810 Zea mays HOM05D007175 ORTHO05D009032 1.0e-06 57.8 70 41.4


User provided reference genes

Program Settings