Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc04g082800.3 Solanum lycopersicum HOM05D006709 ORTHO05D008329 1.0e-48 196.4 98 100.0
Sopen04g036440 Solanum pennellii HOM05D006709 ORTHO05D008329 1.0e-48 196.4 98 100.0
CAN.G1330.15 Capsicum annuum HOM05D006709 ORTHO05D008329 6.1e-46 187.2 98 91.8
Nitab4.5_0007096g0020 Nicotiana tabacum HOM05D006709 ORTHO05D008329 2.3e-45 185.3 98 92.9
Peaxi162Scf00385g00310 Petunia axillaris HOM05D006709 ORTHO05D008329 1.9e-44 182.2 98 90.8
PGSC0003DMG400009925 Solanum tuberosum HOM05D006709 ORTHO05D008329 1.1e-42 176.4 96 91.7
GSVIVG01013436001 Vitis vinifera HOM05D006709 ORTHO05D008329 4.5e-41 171.0 98 80.6
Actinidia17082 Actinidia chinensis HOM05D006709 ORTHO05D008329 2.2e-40 168.7 98 79.6
vmacro21761 Vaccinium macrocarpon HOM05D006709 ORTHO05D008329 5.0e-40 167.5 97 79.4
Actinidia15528 Actinidia chinensis HOM05D006709 ORTHO05D008329 6.5e-40 167.2 98 79.6
Ah.11g042070 Amaranthus hybridus HOM05D006709 ORTHO05D008329 6.5e-40 167.2 98 82.7
Dinv05492 Davidia involucrata HOM05D006709 ORTHO05D008329 1.1e-39 166.4 98 78.6
MBI04_g31214_MAGBIO Magnolia biondii HOM05D006709 ORTHO05D008329 5.5e-39 164.1 98 76.5
SalBow7G4607 Salvia bowleyana HOM05D006709 ORTHO05D008329 5.5e-39 164.1 96 79.2
EL10Ac1g01866 Beta vulgaris HOM05D006709 ORTHO05D008329 9.4e-39 163.3 97 80.4
Hund05070 Selenicereus undatus HOM05D006709 ORTHO05D008329 9.4e-39 163.3 96 79.2
CSS0014821 Camellia sinensis var. sinensis HOM05D006709 ORTHO05D008329 1.2e-38 162.9 96 79.2
FvH4_5g26200 Fragaria vesca HOM05D006709 ORTHO05D008329 6.1e-38 160.6 101 76.2
FAN08G1650 Fragaria x ananassa HOM05D006709 ORTHO05D008329 6.1e-38 160.6 101 76.2
FAN13G1766 Fragaria x ananassa HOM05D006709 ORTHO05D008329 6.1e-38 160.6 101 76.2
Potri.005G257100 Populus trichocarpa HOM05D006709 ORTHO05D008329 6.1e-38 160.6 98 75.5
Sc15g0004050 Simmondsia chinensis HOM05D006709 ORTHO05D008329 1.0e-37 159.8 96 77.1
CSS0027441 Camellia sinensis var. sinensis HOM05D006709 ORTHO05D008329 1.8e-37 159.1 96 77.1
Ciclev10002952m.g Citrus clementina HOM05D006709 ORTHO05D008329 1.8e-37 159.1 98 76.5
Lsat_1_v5_gn_9_48241 Lactuca sativa HOM05D006709 ORTHO05D008329 1.8e-37 159.1 93 83.9
FAN18G1826 Fragaria x ananassa HOM05D006709 ORTHO05D008329 3.9e-37 157.9 101 74.3
HanXRQChr12g0367591 Helianthus annuus HOM05D006709 ORTHO05D008329 3.9e-37 157.9 97 78.4
RcHm_v2.0_Chr7g0216881 Rosa chinensis HOM05D006709 ORTHO05D008329 5.1e-37 157.5 101 74.3
TWI56G0059 Tripterygium wilfordii HOM05D006709 ORTHO05D008329 5.1e-37 157.5 99 78.8
ECA233G3448 Erigeron canadensis HOM05D006709 ORTHO05D008329 6.7e-37 157.1 97 79.4
Manes.18G001600 Manihot esculenta HOM05D006709 ORTHO05D008329 6.7e-37 157.1 98 75.5
Prupe.1G298300 Prunus persica HOM05D006709 ORTHO05D008329 6.7e-37 157.1 98 77.6
ClCG07G009870 Citrullus lanatus HOM05D006709 ORTHO05D008329 8.8e-37 156.8 98 75.5
Glyma.04G014200 Glycine max HOM05D006709 ORTHO05D008329 1.1e-36 156.4 94 80.9
Sed0015665 Sechium edule HOM05D006709 ORTHO05D008329 1.5e-36 156.0 97 76.3
arahy.Tifrunner.gnm1.ann1.6A59KD Arachis hypogaea HOM05D006709 ORTHO05D008329 2.5e-36 155.2 92 80.4
MELO3C016084.2 Cucumis melo HOM05D006709 ORTHO05D008329 3.3e-36 154.8 97 75.3
Thecc.08G099000 Theobroma cacao HOM05D006709 ORTHO05D008329 3.3e-36 154.8 97 78.4
Oeu035869.2 Olea europaea HOM05D006709 ORTHO05D008329 4.3e-36 154.5 96 76.0
Cpa.g.sc26.6 Carica papaya HOM05D006709 ORTHO05D008329 5.7e-36 154.1 98 75.5
Ca_15382_v3 Cicer arietinum L. HOM05D006709 ORTHO05D008329 7.4e-36 153.7 91 76.9
PGR031G3816 Punica granatum HOM05D006709 ORTHO05D008329 7.4e-36 153.7 89 82.0
arahy.Tifrunner.gnm1.ann1.ZQQY3F Arachis hypogaea HOM05D006709 ORTHO05D008329 9.7e-36 153.3 92 79.3
MD06G1003100 Malus domestica HOM05D006709 ORTHO05D008329 9.7e-36 153.3 96 76.0
Phvul.009G008700 Phaseolus vulgaris HOM05D006709 ORTHO05D008329 1.3e-35 152.9 101 75.2
Migut.C00352 Erythranthe guttata HOM05D006709 ORTHO05D008329 1.7e-35 152.5 92 73.9
ATR0605G117 Amborella trichopoda HOM05D006709 ORTHO05D008329 2.2e-35 152.1 96 71.9
QL02p015873 Quercus lobata HOM05D006709 ORTHO05D008329 2.8e-35 151.8 97 72.2
Duzib151G1059 Durio zibethinus HOM05D006709 ORTHO05D008329 3.7e-35 151.4 96 77.1
Nn5g31057 Nelumbo nucifera HOM05D006709 ORTHO05D008329 4.8e-35 151.0 125 63.2
Psat5g008400 Pisum sativum HOM05D006709 ORTHO05D008329 4.8e-35 151.0 91 79.1
Atru.chr13.44 Acer truncatum HOM05D006709 ORTHO05D008329 6.3e-35 150.6 96 72.9
Gohir.A09G212700 Gossypium hirsutum HOM05D006709 ORTHO05D008329 1.1e-34 149.8 95 74.7
Gohir.D09G206300 Gossypium hirsutum HOM05D006709 ORTHO05D008329 1.1e-34 149.8 95 74.7
Gorai.006G230200 Gossypium raimondii HOM05D006709 ORTHO05D008329 1.1e-34 149.8 95 74.7
Lsat_1_v5_gn_8_26041 Lactuca sativa HOM05D006709 ORTHO05D008329 1.1e-34 149.8 98 75.5
Haze_22867 Corylus avellana HOM05D006709 ORTHO05D008329 1.4e-34 149.4 97 74.2
Duzib212G0839 Durio zibethinus HOM05D006709 ORTHO05D008329 1.8e-34 149.1 97 74.2
VMungo1309G2593 Vigna mungo HOM05D006709 ORTHO05D008329 2.4e-34 148.7 92 76.1
unitig_37.g13048 Utricularia gibba HOM05D006709 ORTHO05D008329 3.1e-34 148.3 97 71.1
Hma1.2p1_0489F.1_g164140 Hydrangea macrophylla HOM05D006709 ORTHO05D008329 4.1e-34 147.9 95 75.8
CANSAT78G0412 Cannabis sativa HOM05D006709 ORTHO05D008329 6.9e-34 147.1 97 70.1
Carub.0004s1522 Capsella rubella HOM05D006709 ORTHO05D008329 1.2e-33 146.4 98 67.3
Lj4A4T20 Lonicera japonica HOM05D006709 ORTHO05D008329 1.5e-33 146.0 85 82.4
Lalb_Chr03g0035821 Lupinus albus HOM05D006709 ORTHO05D008329 1.5e-33 146.0 87 80.5
Medtr3g116150 Medicago truncatula HOM05D006709 ORTHO05D008329 2.6e-33 145.2 95 69.5
PSO017G0586 Papaver somniferum HOM05D006709 ORTHO05D008329 2.6e-33 145.2 97 73.2
TPR.G38103 Trifolium pratense HOM05D006709 ORTHO05D008329 2.6e-33 145.2 91 73.6
CDE05G2376 Ceratophyllum demersum HOM05D006709 ORTHO05D008329 3.4e-33 144.8 96 66.7
Lj1g0007500 Lotus japonicus HOM05D006709 ORTHO05D008329 4.5e-33 144.4 95 73.7
Rhsim06G0002600 Rhododendron simsii HOM05D006709 ORTHO05D008329 4.5e-33 144.4 103 67.0
Eucgr.F03607 Eucalyptus grandis HOM05D006709 ORTHO05D008329 5.9e-33 144.1 98 68.4
Aa31LG9G13520 Aethionema arabicum HOM05D006709 ORTHO05D008329 7.7e-33 143.7 98 67.3
Lalb_Chr04g0257801 Lupinus albus HOM05D006709 ORTHO05D008329 7.7e-33 143.7 87 79.3
BcaB01g03928 Brassica carinata HOM05D006709 ORTHO05D008329 1.3e-32 142.9 98 69.4
BcaC01g05832 Brassica carinata HOM05D006709 ORTHO05D008329 1.7e-32 142.5 98 68.4
C03p21970 Brassica napus HOM05D006709 ORTHO05D008329 1.7e-32 142.5 98 68.4
BolC3t14580H Brassica oleracea HOM05D006709 ORTHO05D008329 1.7e-32 142.5 98 68.4
BraA03t11140Z Brassica rapa HOM05D006709 ORTHO05D008329 1.7e-32 142.5 98 68.4
Os08g0512900 Oryza sativa ssp. japonica HOM05D006709 ORTHO05D008329 1.7e-32 142.5 94 69.1
AT2G33585 Arabidopsis thaliana HOM05D006709 ORTHO05D008329 2.9e-32 141.7 98 68.4
A03p18800 Brassica napus HOM05D006709 ORTHO05D008329 3.8e-32 141.4 98 67.3
Oeu035760.1 Olea europaea HOM05D006709 ORTHO05D008329 1.4e-31 139.4 104 68.3
TAR628G1717 Trochodendron aralioides HOM05D006709 ORTHO05D008329 1.9e-31 139.0 80 82.5
AL4G29260 Arabidopsis lyrata HOM05D006709 ORTHO05D008329 2.5e-31 138.7 98 66.3
Cc10_g00210 Coffea canephora HOM05D006709 ORTHO05D008329 2.5e-31 138.7 87 74.7
Thhalv10017474m.g Eutrema salsugineum HOM05D006709 ORTHO05D008329 3.2e-31 138.3 98 67.3
CARHR127610 Cardamine hirsuta HOM05D006709 ORTHO05D008329 1.2e-30 136.3 98 64.3
Glyma.06G014200 Glycine max HOM05D006709 ORTHO05D008329 1.2e-30 136.3 94 74.5
BcaB06g28702 Brassica carinata HOM05D006709 ORTHO05D008329 2.1e-30 135.6 90 71.1
Sabra05G0199000 Salix brachista HOM05D006709 ORTHO05D008329 2.1e-30 135.6 80 78.8
COL.COLO4_12285 Corchorus olitorius HOM05D006709 ORTHO05D008329 3.6e-30 134.8 89 73.0
A04p25850 Brassica napus HOM05D006709 ORTHO05D008329 4.7e-30 134.4 90 71.1
BolC4t27784H Brassica oleracea HOM05D006709 ORTHO05D008329 4.7e-30 134.4 90 70.0
BraA04t18087Z Brassica rapa HOM05D006709 ORTHO05D008329 4.7e-30 134.4 90 71.1
C04p63090 Brassica napus HOM05D006709 ORTHO05D008329 6.1e-30 134.0 90 70.0
BcaC02g07804 Brassica carinata HOM05D006709 ORTHO05D008329 1.0e-29 133.3 90 70.0
Aqoxy5G00959 Aquilegia oxysepala HOM05D006709 ORTHO05D008329 2.3e-29 132.1 80 76.2
CiPaw.07G132800 Carya illinoinensis HOM05D006709 ORTHO05D008329 3.9e-29 131.3 77 77.9
HPP92_015749 Vanilla planifolia HOM05D006709 ORTHO05D008329 6.7e-29 130.6 87 73.6
SEGI_16420 Sequoiadendron giganteum HOM05D006709 ORTHO05D008329 1.5e-28 129.4 92 64.1
Zm00001eb199960 Zea mays HOM05D006709 ORTHO05D008329 2.0e-28 129.0 79 74.7
MSTRG.1007 Avicennia marina HOM05D006709 ORTHO05D008329 3.1e-26 121.7 81 69.1
Sp4g15940 Schrenkiella parvula HOM05D006709 ORTHO05D008329 2.6e-25 118.6 84 65.5
FAN04G1417 Fragaria x ananassa HOM05D006709 ORTHO05D008329 1.0e-24 116.7 105 61.0
CsaV3_4G008460 Cucumis sativus L. HOM05D006709 ORTHO05D008329 1.0e-21 106.7 62 80.6
AagrBONN_evm.TU.Sc2ySwM_344.3753 Anthoceros agrestis HOM05D006709 ORTHO05D008329 1.4e-21 106.3 79 60.8
BcaC01g05833 Brassica carinata HOM05D006709 ORTHO05D008329 1.4e-21 106.3 90 58.9
Manes.05G128900 Manihot esculenta HOM05D006709 ORTHO05D008329 9.7e-20 100.1 72 65.3
Mapoly0015s0105 Marchantia polymorpha HOM05D006709 ORTHO05D008329 3.1e-18 95.1 84 51.2
DCAR_016802 Daucus carota HOM05D006709 ORTHO05D008329 2.6e-17 92.0 89 53.9
vmacro04272 Vaccinium macrocarpon HOM05D006709 ORTHO05D008329 2.6e-17 92.0 115 47.0
Pp3c1_9780 Physcomitrium patens HOM05D006709 ORTHO05D008329 2.7e-14 82.0 90 48.9
SalBow1G7713 Salvia bowleyana HOM05D006709 ORTHO05D008329 4.4e-12 74.7 46 71.7
SHI07946 Sapria himalayana HOM05D006709 ORTHO05D008329 1.7e-11 72.8 66 57.6
DCAR_023021 Daucus carota HOM05D006709 ORTHO05D008329 2.2e-11 72.4 74 47.3
AUR62035175 Chenopodium quinoa HOM05D006709 ORTHO05D008329 1.6e-09 66.2 39 84.6
SalBow8G3647 Salvia bowleyana HOM05D006709 ORTHO05D008329 1.0e-08 63.5 75 49.3
CBR_g27877 Chara braunii HOM05D006709 ORTHO05D008329 6.1e-06 54.3 46 54.3


User provided reference genes

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