Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen04g035090 Solanum pennellii HOM05D021694 ORTHO05D008337 2.4e-143 512.3 287 100.0
Solyc04g081480.3 Solanum lycopersicum HOM05D021694 ORTHO05D008337 2.5e-140 502.3 289 98.3
Nitab4.5_0009651g0030 Nicotiana tabacum HOM05D007760 ORTHO05D008337 2.3e-69 266.5 297 55.9
Peaxi162Scf00438g00084 Petunia axillaris HOM05D021694 ORTHO05D008337 1.4e-63 247.3 283 55.1
CAN.G311.33 Capsicum annuum HOM05D021694 ORTHO05D008337 1.1e-60 237.7 161 77.0
PGSC0003DMG400009866 Solanum tuberosum HOM05D021694 ORTHO05D008337 3.3e-60 236.1 125 94.4
Nitab4.5_0000192g0190 Nicotiana tabacum HOM05D021694 ORTHO05D008337 1.5e-36 157.5 285 40.7
Oeu027538.2 Olea europaea HOM05D007760 ORTHO05D008337 3.8e-32 142.9 281 43.1
Oeu046271.1 Olea europaea HOM05D007760 ORTHO05D008337 5.2e-29 132.5 303 37.3
Rhsim06G0021400 Rhododendron simsii HOM05D007760 ORTHO05D008337 5.4e-26 122.5 288 37.5
RhsimUnG0066000 Rhododendron simsii HOM05D007760 ORTHO05D008337 5.4e-26 122.5 278 39.2
Dinv31848 Davidia involucrata HOM05D007760 ORTHO05D008337 9.1e-26 121.7 311 34.4
CSS0044946 Camellia sinensis var. sinensis HOM05D007760 ORTHO05D008337 1.2e-25 121.3 306 33.0
TAR381G0719 Trochodendron aralioides HOM05D007760 ORTHO05D008337 1.6e-25 120.9 332 35.8
RhsimUnG0065900 Rhododendron simsii HOM05D007760 ORTHO05D008337 5.0e-24 115.9 279 35.5
MSTRG.1190 Avicennia marina HOM05D007760 ORTHO05D008337 8.6e-24 115.2 280 34.3
SalBow8G4233 Salvia bowleyana HOM05D007760 ORTHO05D008337 8.6e-24 115.2 272 40.4
TAR625G0557 Trochodendron aralioides HOM05D007760 ORTHO05D008337 1.9e-23 114.0 310 31.9
Manes.18G013300 Manihot esculenta HOM05D007760 ORTHO05D008337 3.3e-23 113.2 314 31.5
Migut.N03163 Erythranthe guttata HOM05D007760 ORTHO05D008337 1.2e-22 111.3 293 32.8
SGA_v2.0_scaffold11G05919 Striga asiatica HOM05D007760 ORTHO05D008337 1.8e-21 107.5 295 30.2
Nitab4.5_0025981g0010 Nicotiana tabacum HOM05D007760 ORTHO05D008337 8.9e-21 105.1 156 44.2
MSTRG.24243 Avicennia marina HOM05D007760 ORTHO05D008337 1.2e-20 104.8 318 33.6
Actinidia15424 Actinidia chinensis HOM05D007760 ORTHO05D008337 3.4e-20 103.2 302 31.5
Phvul.009G017200 Phaseolus vulgaris HOM05D007760 ORTHO05D008337 1.8e-18 97.4 278 33.8
Potri.005G239800 Populus trichocarpa HOM05D007760 ORTHO05D008337 1.8e-18 97.4 324 28.1
Dinv39521 Davidia involucrata HOM05D007760 ORTHO05D008337 2.4e-18 97.1 159 40.9
Rhsim07G0247700 Rhododendron simsii HOM05D007760 ORTHO05D008337 3.2e-18 96.7 160 44.4
Duzib041G0564 Durio zibethinus HOM05D007760 ORTHO05D008337 7.0e-18 95.5 303 29.7
SalBow7G2592 Salvia bowleyana HOM05D007760 ORTHO05D008337 1.7e-16 90.9 285 30.9
Thecc.08G044900 Theobroma cacao HOM05D007760 ORTHO05D008337 5.0e-16 89.4 295 31.5
Migut.C00840 Erythranthe guttata HOM05D007760 ORTHO05D008337 2.5e-15 87.0 312 30.8
MBI05_g33714_MAGBIO Magnolia biondii HOM05D007760 ORTHO05D008337 3.3e-15 86.7 296 31.8
Potri.002G021900 Populus trichocarpa HOM05D007760 ORTHO05D008337 3.3e-15 86.7 286 29.0
Duzib116G0858 Durio zibethinus HOM05D007760 ORTHO05D008337 1.2e-14 84.7 288 33.0
Glyma.06G024200 Glycine max HOM05D007760 ORTHO05D008337 6.1e-14 82.4 289 30.8
vmacro22892 Vaccinium macrocarpon HOM05D007760 ORTHO05D008337 4.0e-13 79.7 298 30.9
Ciclev10001832m.g Citrus clementina HOM05D007760 ORTHO05D008337 6.8e-13 79.0 214 34.6
Glyma.04G024000 Glycine max HOM05D007760 ORTHO05D008337 1.2e-12 78.2 278 28.8
VMungo1309G0539 Vigna mungo HOM05D007760 ORTHO05D008337 1.5e-12 77.8 281 29.9
Sabra05G0185300 Salix brachista HOM05D007760 ORTHO05D008337 2.0e-12 77.4 314 29.0
Lalb_Chr14g0369911 Lupinus albus HOM05D007760 ORTHO05D008337 6.4e-11 72.4 222 33.8
SGA_v2.0_scaffold35G14252 Striga asiatica HOM05D007760 ORTHO05D008337 1.1e-10 71.6 154 37.0
Medtr1g025290 Medicago truncatula HOM05D007760 ORTHO05D008337 1.9e-10 70.9 239 28.0
TPR.G20837 Trifolium pratense HOM05D007760 ORTHO05D008337 1.9e-10 70.9 225 26.2
Cpa.g.sc26.48 Carica papaya HOM05D007760 ORTHO05D008337 2.4e-10 70.5 159 37.1
QL02p011665 Quercus lobata HOM05D007760 ORTHO05D008337 5.4e-10 69.3 245 28.6
Cfa013954 Carpinus fangiana HOM05D007760 ORTHO05D008337 1.6e-09 67.8 210 32.4
Psat6g002760 Pisum sativum HOM05D007760 ORTHO05D008337 1.6e-09 67.8 212 27.8
Gorai.010G004100 Gossypium raimondii HOM05D007760 ORTHO05D008337 2.7e-09 67.0 271 28.0
Gorai.010G003900 Gossypium raimondii HOM05D007760 ORTHO05D008337 3.5e-09 66.6 270 27.4
Lalb_Chr11g0061901 Lupinus albus HOM05D007760 ORTHO05D008337 3.5e-09 66.6 202 33.7
Psat6g002560 Pisum sativum HOM05D007760 ORTHO05D008337 3.5e-09 66.6 165 30.3
ClCG08G014270 Citrullus lanatus HOM05D016278 ORTHO05D008337 4.6e-09 66.2 167 34.7
Gorai.010G004000 Gossypium raimondii HOM05D007760 ORTHO05D008337 4.6e-09 66.2 258 27.1
Gohir.D06G006600 Gossypium hirsutum HOM05D007760 ORTHO05D008337 6.0e-09 65.9 272 27.9
Gohir.D06G006700 Gossypium hirsutum HOM05D007760 ORTHO05D008337 1.0e-08 65.1 258 26.7
TWI56G0173 Tripterygium wilfordii HOM05D007760 ORTHO05D008337 1.0e-08 65.1 316 28.8
CiPaw.07G149400 Carya illinoinensis HOM05D007760 ORTHO05D008337 1.7e-08 64.3 86 51.2
Lalb_Chr23g0266151 Lupinus albus HOM05D007760 ORTHO05D008337 1.7e-08 64.3 275 28.4
Prupe.1G364900 Prunus persica HOM05D015458 ORTHO05D008337 2.3e-08 63.9 195 30.3
TWI36G1437 Tripterygium wilfordii HOM05D007760 ORTHO05D008337 3.0e-08 63.5 312 28.2
Eucgr.F00585 Eucalyptus grandis HOM05D007760 ORTHO05D008337 6.6e-08 62.4 93 47.3
Gohir.A06G003800 Gossypium hirsutum HOM05D007760 ORTHO05D008337 6.6e-08 62.4 266 27.1
Gohir.A06G003700 Gossypium hirsutum HOM05D007760 ORTHO05D008337 8.6e-08 62.0 270 27.4
Psat6g002720 Pisum sativum HOM05D007760 ORTHO05D008337 8.6e-08 62.0 269 30.5
Haze_22637 Corylus avellana HOM05D007760 ORTHO05D008337 1.5e-07 61.2 207 32.9
COL.COLO4_26143 Corchorus olitorius HOM05D007760 ORTHO05D008337 1.9e-07 60.8 282 27.7
Gohir.A06G003900 Gossypium hirsutum HOM05D007760 ORTHO05D008337 3.3e-07 60.1 269 27.5
Cc10_g01650 Coffea canephora HOM05D007760 ORTHO05D008337 5.6e-07 59.3 341 29.9
Psat6g002640 Pisum sativum HOM05D007760 ORTHO05D008337 5.6e-07 59.3 96 36.5
Ca_13430_v3 Cicer arietinum L. HOM05D007760 ORTHO05D008337 9.5e-07 58.5 199 27.1
Nn5g29094 Nelumbo nucifera HOM05D007760 ORTHO05D008337 9.5e-07 58.5 341 26.4
CiPaw.08G066600 Carya illinoinensis HOM05D007760 ORTHO05D008337 3.6e-06 56.6 200 29.0
arahy.Tifrunner.gnm1.ann1.EU98QJ Arachis hypogaea HOM05D007760 ORTHO05D008337 6.2e-06 55.8 83 44.6
arahy.Tifrunner.gnm1.ann1.WD1IN2 Arachis hypogaea HOM05D007760 ORTHO05D008337 6.2e-06 55.8 83 44.6
DCAR_009486 Daucus carota HOM05D015458 ORTHO05D008337 6.2e-06 55.8 167 26.3


User provided reference genes

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