Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc04g080630.4 Solanum lycopersicum HOM05D006275 ORTHO05D007839 7.5e-58 226.9 107 100.0
Sopen04g034220 Solanum pennellii HOM05D006275 ORTHO05D007839 7.5e-58 226.9 107 100.0
PGSC0003DMG400003696 Solanum tuberosum HOM05D006275 ORTHO05D007839 8.3e-57 223.4 107 99.1
Nitab4.5_0009228g0020 Nicotiana tabacum HOM05D006275 ORTHO05D007839 2.8e-52 208.4 107 91.6
Nitab4.5_0003265g0060 Nicotiana tabacum HOM05D006275 ORTHO05D007839 8.1e-52 206.8 105 93.3
Peaxi162Scf00140g10025 Petunia axillaris HOM05D006275 ORTHO05D007839 8.1e-52 206.8 105 90.5
SalBow7G2217 Salvia bowleyana HOM05D006275 ORTHO05D007839 2.3e-46 188.7 107 82.2
MSTRG.1264 Avicennia marina HOM05D006275 ORTHO05D007839 8.6e-46 186.8 103 84.5
Oeu047769.1 Olea europaea HOM05D006275 ORTHO05D007839 9.5e-45 183.3 104 80.8
Oeu002824.1 Olea europaea HOM05D006275 ORTHO05D007839 1.6e-44 182.6 104 79.8
Migut.J00614 Erythranthe guttata HOM05D006275 ORTHO05D007839 1.8e-43 179.1 104 78.8
Migut.N00484 Erythranthe guttata HOM05D006275 ORTHO05D007839 3.4e-42 174.9 107 74.8
Ah.05g177020 Amaranthus hybridus HOM05D006275 ORTHO05D007839 9.9e-42 173.3 99 79.8
CSS0002686 Camellia sinensis var. sinensis HOM05D000817 ORTHO05D000702 9.9e-42 173.3 105 75.2
CSS0030866 Camellia sinensis var. sinensis HOM05D000817 ORTHO05D000702 9.9e-42 173.3 105 75.2
EL10Ac1g00643 Beta vulgaris HOM05D006275 ORTHO05D007839 1.3e-41 172.9 99 79.8
Cc09_g08950 Coffea canephora HOM05D006275 ORTHO05D007839 1.7e-41 172.6 108 76.9
HanXRQChr09g0268981 Helianthus annuus HOM05D006275 ORTHO05D007839 2.9e-41 171.8 104 76.9
DCAR_022467 Daucus carota HOM05D006275 ORTHO05D007839 3.8e-41 171.4 97 81.4
SGA_v2.0_scaffold201G41391 Striga asiatica HOM05D006275 ORTHO05D007839 1.1e-40 169.9 104 75.0
unitig_46.g17937 Utricularia gibba HOM05D006275 ORTHO05D007839 1.1e-40 169.9 99 79.8
AUR62038041 Chenopodium quinoa HOM05D006275 ORTHO05D007839 2.4e-40 168.7 98 78.6
Dinv39443 Davidia involucrata HOM05D006275 ORTHO05D007839 5.4e-40 167.5 103 71.8
Sc02g0005820 Simmondsia chinensis HOM05D006275 ORTHO05D007839 5.4e-40 167.5 103 76.7
Lsat_1_v5_gn_4_117720 Lactuca sativa HOM05D006275 ORTHO05D007839 7.1e-40 167.2 103 74.8
AUR62014497 Chenopodium quinoa HOM05D006275 ORTHO05D007839 9.2e-40 166.8 99 76.8
ECA232G2653 Erigeron canadensis HOM05D006275 ORTHO05D007839 2.1e-39 165.6 107 69.2
HanXRQChr16g0501501 Helianthus annuus HOM05D006275 ORTHO05D007839 6.0e-39 164.1 100 75.0
THA.LOC104811376 Tarenaya hassleriana HOM05D006275 ORTHO05D007839 6.0e-39 164.1 96 80.2
Manes.05G156800 Manihot esculenta HOM05D006275 ORTHO05D007839 1.7e-38 162.5 104 71.2
CANSAT56G0974 Cannabis sativa HOM05D006275 ORTHO05D007839 3.9e-38 161.4 105 70.5
GSVIVG01009748001 Vitis vinifera HOM05D006275 ORTHO05D007839 3.9e-38 161.4 98 76.5
MELO3C003811.2 Cucumis melo HOM05D006275 ORTHO05D007839 5.1e-38 161.0 105 71.4
Atru.chr13.432 Acer truncatum HOM05D006275 ORTHO05D007839 6.6e-38 160.6 95 74.7
Eucgr.F01878 Eucalyptus grandis HOM05D006275 ORTHO05D007839 8.6e-38 160.2 101 72.3
Sed0006872 Sechium edule HOM05D006275 ORTHO05D007839 8.6e-38 160.2 96 76.0
CsaV3_3G045380 Cucumis sativus L. HOM05D006275 ORTHO05D007839 1.1e-37 159.8 96 76.0
BcaC08g47007 Brassica carinata HOM05D006275 ORTHO05D007839 1.9e-37 159.1 95 74.7
ClCG05G018790 Citrullus lanatus HOM05D006275 ORTHO05D007839 1.9e-37 159.1 96 76.0
Thhalv10019294m.g Eutrema salsugineum HOM05D006275 ORTHO05D007839 1.9e-37 159.1 101 70.3
FAN15G2697 Fragaria x ananassa HOM05D006275 ORTHO05D007839 1.9e-37 159.1 106 70.8
FAN27G1059 Fragaria x ananassa HOM05D006275 ORTHO05D007839 1.9e-37 159.1 106 70.8
Sabra02G0026900 Salix brachista HOM05D006275 ORTHO05D007839 1.9e-37 159.1 102 69.6
Ciclev10002669m.g Citrus clementina HOM05D006275 ORTHO05D007839 2.5e-37 158.7 104 70.2
BcaC08g47361 Brassica carinata HOM05D006275 ORTHO05D007839 3.3e-37 158.3 95 74.7
A07p40910 Brassica napus HOM05D006275 ORTHO05D007839 3.3e-37 158.3 95 74.7
C06p49340 Brassica napus HOM05D006275 ORTHO05D007839 3.3e-37 158.3 95 74.7
BolC6t39969H Brassica oleracea HOM05D006275 ORTHO05D007839 3.3e-37 158.3 95 74.7
BraA07t31631Z Brassica rapa HOM05D006275 ORTHO05D007839 3.3e-37 158.3 95 74.7
BcaC02g12477 Brassica carinata HOM05D006275 ORTHO05D007839 4.3e-37 157.9 95 74.7
A05p02860 Brassica napus HOM05D006275 ORTHO05D007839 4.3e-37 157.9 95 74.7
C04p03490 Brassica napus HOM05D006275 ORTHO05D007839 4.3e-37 157.9 95 74.7
BolC4t21983H Brassica oleracea HOM05D006275 ORTHO05D007839 4.3e-37 157.9 95 74.7
BraA05t19277Z Brassica rapa HOM05D006275 ORTHO05D007839 4.3e-37 157.9 95 74.7
CDE06G0798 Ceratophyllum demersum HOM05D006275 ORTHO05D007839 5.6e-37 157.5 107 70.1
FvH4_2g39490 Fragaria vesca HOM05D006275 ORTHO05D007839 5.6e-37 157.5 106 69.8
Potri.002G033300 Populus trichocarpa HOM05D006275 ORTHO05D007839 7.3e-37 157.1 102 68.6
PGR031G1371 Punica granatum HOM05D006275 ORTHO05D007839 7.3e-37 157.1 96 74.0
AL2G35280 Arabidopsis lyrata HOM05D006275 ORTHO05D007839 9.6e-37 156.8 97 74.2
Carub.0002s2219 Capsella rubella HOM05D006275 ORTHO05D007839 9.6e-37 156.8 97 75.3
Thecc.08G031000 Theobroma cacao HOM05D006275 ORTHO05D007839 9.6e-37 156.8 106 71.7
ATR0568G031 Amborella trichopoda HOM05D006275 ORTHO05D007839 1.2e-36 156.4 104 68.3
AT1G75350 Arabidopsis thaliana HOM05D006275 ORTHO05D007839 1.2e-36 156.4 96 71.9
Cpa.g.c33902 Carica papaya HOM05D006275 ORTHO05D007839 1.2e-36 156.4 96 74.0
Cfa013858 Carpinus fangiana HOM05D006275 ORTHO05D007839 1.6e-36 156.0 101 73.3
CDE02G2235 Ceratophyllum demersum HOM05D006275 ORTHO05D007839 1.6e-36 156.0 107 70.1
Nn1g04018 Nelumbo nucifera HOM05D006275 ORTHO05D007839 1.6e-36 156.0 106 68.9
Sp5g30490 Schrenkiella parvula HOM05D006275 ORTHO05D007839 1.6e-36 156.0 95 72.6
RcHm_v2.0_Chr6g0301461 Rosa chinensis HOM05D006275 ORTHO05D007839 2.8e-36 155.2 110 69.1
TWI36G0893 Tripterygium wilfordii HOM05D006275 ORTHO05D007839 2.8e-36 155.2 102 69.6
Gohir.D05G195400 Gossypium hirsutum HOM05D006275 ORTHO05D007839 4.7e-36 154.5 106 69.8
Gorai.009G200300 Gossypium raimondii HOM05D006275 ORTHO05D007839 4.7e-36 154.5 106 69.8
CARHR068700 Cardamine hirsuta HOM05D006275 ORTHO05D007839 6.2e-36 154.1 97 72.2
CiPaw.07G158800 Carya illinoinensis HOM05D006275 ORTHO05D007839 8.1e-36 153.7 100 74.0
arahy.Tifrunner.gnm1.ann1.RSD13X Arachis hypogaea HOM05D006275 ORTHO05D007839 1.1e-35 153.3 108 66.7
arahy.Tifrunner.gnm1.ann1.T5GRUU Arachis hypogaea HOM05D006275 ORTHO05D007839 1.1e-35 153.3 108 66.7
Actinidia37997 Actinidia chinensis HOM05D006275 ORTHO05D007839 1.4e-35 152.9 90 72.2
CSS0039262 Camellia sinensis var. sinensis HOM05D006275 ORTHO05D007839 1.8e-35 152.5 91 76.9
Haze_22533 Corylus avellana HOM05D006275 ORTHO05D007839 1.8e-35 152.5 101 72.3
COL.COLO4_26271 Corchorus olitorius HOM05D006275 ORTHO05D007839 2.4e-35 152.1 103 68.0
Gohir.A05G192200 Gossypium hirsutum HOM05D006275 ORTHO05D007839 2.4e-35 152.1 106 68.9
Aa31LG4G5560 Aethionema arabicum HOM05D006275 ORTHO05D007839 3.1e-35 151.8 95 72.6
PSO731G0021 Papaver somniferum HOM05D006275 ORTHO05D007839 3.1e-35 151.8 102 68.6
PSO764G0160 Papaver somniferum HOM05D006275 ORTHO05D007839 4.0e-35 151.4 102 67.6
TAR628G1199 Trochodendron aralioides HOM05D006275 ORTHO05D007839 5.2e-35 151.0 102 71.6
arahy.Tifrunner.gnm1.ann1.W9L06J Arachis hypogaea HOM05D006275 ORTHO05D007839 9.0e-35 150.2 98 67.3
arahy.Tifrunner.gnm1.ann1.WR55YC Arachis hypogaea HOM05D006275 ORTHO05D007839 9.0e-35 150.2 98 67.3
Lalb_Chr22g0354641 Lupinus albus HOM05D006275 ORTHO05D007839 9.0e-35 150.2 90 73.3
Prupe.1G376100 Prunus persica HOM05D006275 ORTHO05D007839 9.0e-35 150.2 110 66.4
MD15G1023800 Malus domestica HOM05D006275 ORTHO05D007839 1.2e-34 149.8 101 70.3
MD08G1027600 Malus domestica HOM05D006275 ORTHO05D007839 2.6e-34 148.7 101 71.3
Phvul.001G012400 Phaseolus vulgaris HOM05D006275 ORTHO05D007839 2.6e-34 148.7 99 72.7
HPP92_009679 Vanilla planifolia HOM05D006275 ORTHO05D007839 2.6e-34 148.7 103 61.2
Duzib093G0437 Durio zibethinus HOM05D006275 ORTHO05D007839 5.8e-34 147.5 100 71.0
Ca_18049_v3 Cicer arietinum L. HOM05D006275 ORTHO05D007839 1.3e-33 146.4 98 70.4
VMungo0647G0412 Vigna mungo HOM05D006275 ORTHO05D007839 1.7e-33 146.0 99 70.7
Medtr1g022450 Medicago truncatula HOM05D006275 ORTHO05D007839 3.8e-33 144.8 89 71.9
Aqoxy5G01584 Aquilegia oxysepala HOM05D006275 ORTHO05D007839 4.9e-33 144.4 96 69.8
Pp3c4_22510 Physcomitrium patens HOM05D006275 ORTHO05D007839 1.4e-32 142.9 103 62.1
Glyma.17G252600 Glycine max HOM05D006275 ORTHO05D007839 2.4e-32 142.1 99 68.7
Glyma.14G072400 Glycine max HOM05D006275 ORTHO05D007839 3.2e-32 141.7 99 67.7
Rhsim07G0241500 Rhododendron simsii HOM05D006275 ORTHO05D007839 4.2e-32 141.4 102 64.7
RhsimUnG0236400 Rhododendron simsii HOM05D006275 ORTHO05D007839 4.2e-32 141.4 102 64.7
Lj5g0023115 Lotus japonicus HOM05D006275 ORTHO05D007839 9.3e-32 140.2 99 67.7
Pp3c3_430 Physcomitrium patens HOM05D006275 ORTHO05D007839 1.2e-31 139.8 103 62.1
vmacro04538 Vaccinium macrocarpon HOM05D006275 ORTHO05D007839 2.1e-31 139.0 96 66.7
Pp3c13_7030 Physcomitrium patens HOM05D006275 ORTHO05D007839 2.7e-31 138.7 103 57.3
Psat6g009240 Pisum sativum HOM05D006275 ORTHO05D007839 1.0e-30 136.7 98 65.3
TPR.G20152 Trifolium pratense HOM05D006275 ORTHO05D007839 1.5e-29 132.9 88 67.0
Mapoly0051s0056 Marchantia polymorpha HOM05D006275 ORTHO05D007839 9.6e-29 130.2 99 58.6
CBR_g52135 Chara braunii HOM05D006275 ORTHO05D007839 3.1e-27 125.2 99 59.6
FAN20G1429 Fragaria x ananassa HOM05D006275 ORTHO05D007839 3.1e-27 125.2 84 66.7
AagrBONN_evm.TU.Sc2ySwM_368.2624 Anthoceros agrestis HOM05D006275 ORTHO05D007839 1.5e-26 122.9 99 59.6
SMO117G0016 Selaginella moellendorffii HOM05D006275 ORTHO05D007839 2.0e-26 122.5 96 57.3
SEGI_04934 Sequoiadendron giganteum HOM05D006275 ORTHO05D007839 7.1e-24 114.0 100 53.0
Os01g0633000 Oryza sativa ssp. japonica HOM05D006275 ORTHO05D007839 1.0e-22 110.2 80 58.8
Zm00001eb159080 Zea mays HOM05D006275 ORTHO05D007839 1.3e-22 109.8 80 60.0
QL02p009087 Quercus lobata HOM05D006275 ORTHO05D007839 5.6e-21 104.4 71 69.0
Duzib041G0262 Durio zibethinus HOM05D006275 ORTHO05D007839 9.6e-21 103.6 76 69.7
Cre08.g365400 Chlamydomonas reinhardtii HOM05D006275 ORTHO05D007839 2.1e-20 102.4 90 51.1
BcaC09g48250 Brassica carinata HOM05D006275 ORTHO05D007839 3.4e-18 95.1 65 64.6
MCO12G376 Micromonas commoda HOM05D006275 ORTHO05D007839 1.3e-17 93.2 88 43.2
TWI56G0783 Tripterygium wilfordii HOM05D006275 ORTHO05D007839 7.9e-15 84.0 58 70.7
Gohir.D12G058400 Gossypium hirsutum HOM05D006275 ORTHO05D007839 5.8e-10 67.8 45 64.4
BcaC05g28396 Brassica carinata HOM05D006275 ORTHO05D003437 2.9e-09 65.5 56 62.5
Gorai.010G176600 Gossypium raimondii HOM05D006275 ORTHO05D007839 1.1e-08 63.5 45 62.2


User provided reference genes

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